FFCP PHASE1:Mm9::chr4:126430593..126430605,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:126430593..126430605,-
|short_description=p3@Ncdn
|description=CAGE_peak_3_at_Ncdn_5end
|association_with_transcript=47bp_to_ENSMUST00000030637_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26562 | |EntrezGene=26562 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0E0 | |UniProt=Q9Z0E0 | ||
|association_with_transcript=47bp_to_ENSMUST00000030637_5end | |||
|cluster_id=chr4:126430593..126430605,- | |||
|description=CAGE_peak_3_at_Ncdn_5end | |||
|id=chr4:126430593..126430605,- | |||
|ontology_enrichment_celltype=CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23;CL:0000221!8.97e-12!44;CL:0000133!8.97e-12!44;CL:0000540!1.50e-11!33;CL:0000047!1.50e-11!33;CL:0000031!1.50e-11!33;CL:0000404!1.50e-11!33;CL:0002319!1.90e-11!43;CL:0000393!5.69e-08!39;CL:0000211!5.69e-08!39;CL:0000055!8.27e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-24,23;CL:0000337,1.27e-24,23;CL:0000540,1.36e-19,33;CL:0000047,1.36e-19,33;CL:0000031,1.36e-19,33;CL:0000404,1.36e-19,33;CL:0002319,6.52e-16,43;CL:0000393,2.05e-15,39;CL:0000211,2.05e-15,39;CL:0000221,2.28e-15,44;CL:0000133,2.28e-15,44;CL:0002321,1.38e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.61e-46,73;UBERON:0000073,1.74e-45,54;UBERON:0001016,1.17e-44,75;UBERON:0001049,1.26e-42,52;UBERON:0005068,1.26e-42,52;UBERON:0006241,1.26e-42,52;UBERON:0007135,1.26e-42,52;UBERON:0002346,8.23e-39,64;UBERON:0003075,8.23e-39,64;UBERON:0007284,8.23e-39,64;UBERON:0002020,1.91e-37,34;UBERON:0000955,1.42e-36,47;UBERON:0006238,1.42e-36,47;UBERON:0002616,4.50e-35,46;UBERON:0004121,7.67e-35,95;UBERON:0000924,7.67e-35,95;UBERON:0006601,7.67e-35,95;UBERON:0010371,2.77e-32,73;UBERON:0003080,3.15e-32,40;UBERON:0003528,1.70e-31,29;UBERON:0002791,1.70e-31,29;UBERON:0001893,1.70e-31,29;UBERON:0002780,9.19e-31,39;UBERON:0001890,9.19e-31,39;UBERON:0006240,9.19e-31,39;UBERON:0003056,1.40e-27,49;UBERON:0010314,9.84e-23,92;UBERON:0000956,2.56e-22,21;UBERON:0001869,2.56e-22,21;UBERON:0000203,2.56e-22,21;UBERON:0002619,2.87e-18,17;UBERON:0002021,2.00e-14,10;UBERON:0000411,2.00e-14,10;UBERON:0001950,2.00e-14,10;UBERON:0000025,3.48e-13,114;UBERON:0004111,2.39e-12,122;UBERON:0003076,3.34e-10,12;UBERON:0003057,3.34e-10,12;UBERON:0002420,4.19e-10,8;UBERON:0007245,4.19e-10,8;UBERON:0010009,4.19e-10,8;UBERON:0010011,4.19e-10,8;UBERON:0000454,4.19e-10,8;UBERON:0011216,3.28e-09,194;UBERON:0002240,3.06e-08,6;UBERON:0005174,3.06e-08,6;UBERON:0001137,3.06e-08,6;UBERON:0000483,5.89e-07,174;UBERON:0001948,6.58e-07,5;UBERON:0002315,6.58e-07,5;UBERON:0000119,9.77e-07,176 | |||
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| ||
|short_description=p3@Ncdn | |||
}} | }} |
Latest revision as of 08:36, 26 September 2015
Short description: | p3@Ncdn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ncdn_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 47bp_to_ENSMUST00000030637_5end |
EntrezGene: | Ncdn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.27e-24 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-24 | 23 |
neuron | 1.36e-19 | 33 |
neuronal stem cell | 1.36e-19 | 33 |
neuroblast | 1.36e-19 | 33 |
electrically signaling cell | 1.36e-19 | 33 |
neural cell | 6.52e-16 | 43 |
electrically responsive cell | 2.05e-15 | 39 |
electrically active cell | 2.05e-15 | 39 |
ectodermal cell | 2.28e-15 | 44 |
neurectodermal cell | 2.28e-15 | 44 |
embryonic cell | 1.38e-07 | 70 |