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FFCP PHASE1:Mm9::chr14:71028752..71028838,-: Difference between revisions

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(Created page with "{{FFCP |id=chr14:71028752..71028838,- |short_description=p2@Epb4.9 |description=CAGE_peak_2_at_Epb4.9_5end |association_with_transcript=0bp_to_uc007uoq.1_5end |EntrezGene...")
 
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{{FFCP
{{FFCP
|id=chr14:71028752..71028838,-
|DHSsupport=NA
|short_description=p2@Epb4.9
|DPIdataset=NA
|description=CAGE_peak_2_at_Epb4.9_5end
|association_with_transcript=0bp_to_uc007uoq.1_5end
|EntrezGene=13829
|EntrezGene=13829
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc007uoq.1_5end
|cluster_id=chr14:71028752..71028838,-
|description=CAGE_peak_2_at_Epb4.9_5end
|id=chr14:71028752..71028838,-
|ontology_enrichment_celltype=CL:0000540!5.34e-14!33;CL:0000047!5.34e-14!33;CL:0000031!5.34e-14!33;CL:0000404!5.34e-14!33;CL:0000117!1.72e-13!23;CL:0000337!1.72e-13!23;CL:0002319!1.46e-12!43;CL:0000221!1.96e-12!44;CL:0000133!1.96e-12!44;CL:0000393!2.15e-09!39;CL:0000211!2.15e-09!39;CL:0000055!2.25e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-15,23;CL:0000337,1.19e-15,23;CL:0000540,1.62e-15,33;CL:0000047,1.62e-15,33;CL:0000031,1.62e-15,33;CL:0000404,1.62e-15,33;CL:0000393,3.14e-11,39;CL:0000211,3.14e-11,39;CL:0002319,4.16e-11,43;CL:0000221,1.42e-10,44;CL:0000133,1.42e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.86e-32!75;UBERON:0001016!2.86e-32!75;UBERON:0001017!5.13e-32!73;UBERON:0005743!5.13e-32!73;UBERON:0002346!5.20e-31!71;UBERON:0003075!5.20e-31!71;UBERON:0007284!5.20e-31!71;UBERON:0004121!6.98e-29!102;UBERON:0000924!6.98e-29!102;UBERON:0006601!6.98e-29!102;UBERON:0001049!2.73e-27!52;UBERON:0005068!2.73e-27!52;UBERON:0006241!2.73e-27!52;UBERON:0007135!2.73e-27!52;UBERON:0000033!1.15e-26!63;UBERON:0000955!2.73e-26!50;UBERON:0006238!2.73e-26!50;UBERON:0002616!1.50e-25!49;UBERON:0003056!8.34e-23!49;UBERON:0003080!2.99e-21!40;UBERON:0002780!1.65e-20!39;UBERON:0001890!1.65e-20!39;UBERON:0006240!1.65e-20!39;UBERON:0002020!7.17e-20!34;UBERON:0002791!6.68e-17!29;UBERON:0003528!6.68e-17!29;UBERON:0001893!6.68e-17!29;UBERON:0007811!4.67e-12!86;UBERON:0000956!4.99e-12!21;UBERON:0001869!4.99e-12!21;UBERON:0000203!4.99e-12!21;UBERON:0002619!3.09e-10!17;UBERON:0000153!4.00e-09!94;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.05e-33,75;UBERON:0001017,8.59e-33,73;UBERON:0002346,6.17e-32,64;UBERON:0003075,6.17e-32,64;UBERON:0007284,6.17e-32,64;UBERON:0000073,9.79e-31,54;UBERON:0001049,5.37e-29,52;UBERON:0005068,5.37e-29,52;UBERON:0006241,5.37e-29,52;UBERON:0007135,5.37e-29,52;UBERON:0004121,6.92e-29,95;UBERON:0000924,6.92e-29,95;UBERON:0006601,6.92e-29,95;UBERON:0003056,2.01e-25,49;UBERON:0000955,2.47e-25,47;UBERON:0006238,2.47e-25,47;UBERON:0010371,8.17e-25,73;UBERON:0002616,1.70e-24,46;UBERON:0003080,1.61e-23,40;UBERON:0002780,1.18e-22,39;UBERON:0001890,1.18e-22,39;UBERON:0006240,1.18e-22,39;UBERON:0002020,7.65e-22,34;UBERON:0010314,1.07e-19,92;UBERON:0003528,2.35e-18,29;UBERON:0002791,2.35e-18,29;UBERON:0001893,2.35e-18,29;UBERON:0000956,1.18e-12,21;UBERON:0001869,1.18e-12,21;UBERON:0000203,1.18e-12,21;UBERON:0002619,1.55e-10,17;UBERON:0002021,5.91e-10,10;UBERON:0000411,5.91e-10,10;UBERON:0001950,5.91e-10,10;UBERON:0002420,5.83e-07,8;UBERON:0007245,5.83e-07,8;UBERON:0010009,5.83e-07,8;UBERON:0010011,5.83e-07,8;UBERON:0000454,5.83e-07,8
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9176840142634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,47.5443683020055,47.609188134483,43.1005354384202,0,0,0,0,0,0.898800331555214,2.68952813725088,10.6800300677732,8.23536223823313,7.99234853135252,65.9853773972786,51.462370041726,18.1286382838132,12.9391385874619,12.8690630125403,116.722833859352,109.683423415176,117.048178341258,56.7111037239834,64.4073010960964,40.6312429034273,121.723787564602,101.860032415734,113.9874928415,60.6934886075755,55.382583830851,55.3606354101143,1.21161909333094,4.30757892608677,0,0,0,0,0,0,6.46044332606059,0,0,0,0.422530259330042,0,0,0,0,0,0,2.96878087269556,0,4.60170631100957,1.56136794089522,4.56698217468212,3.92046345335299,5.72746034099966,3.41007250693544,1.63366568728578,0,0.144599356919912,0,0.323533699894818,0,0,1.86391761218122,58.2633786052979,51.7333365829234,1.27728527604296,0,0,0,132.265134594458,121.695160349755,54.9109518733217,154.182172010549,139.876355159691,116.153516908794,108.53940499233,0,0,0,3.99839526184301,1.43132487258974,2.75882525320168,6.30217454318722,4.21973489940002,4.28629944653366,3.45907044769094,3.84177070694888,8.2785078636485,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0.134206418760372,172.437757822584,34.7817589841981,0,0.264450566663544,0.213288250535234,0.928946687441754,1.67527699718721,1.00841762311671,1.33426826306922,2.28270751335071,0.474529061544512,1.4822905925161,1.75934646160189,2.38747766449381,1.9496408711912,0.898819408654221,1.51296634912286,0.398282546508734,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.420814919341911,0.189709611372772,0.147610147979602,0.627994911365499,0.123397163921801,0,0.333690211432188,0,0.449724224769707,0.811440485554012,0,0.763877555344259,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0.54390568381871,0,0,103.715681132114,86.5022247050459,0,0,3.15508219416257,3.12350995437311,5.38558494331997,1.19484398976276,2.00518806674155,1.98153571552183,4.04810701674894,5.55286130031493,2.37172666767914,121.138136291021,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0.565815239267694,0,0.614870295887855,0.775284879504663,0,0.356497378384721,0.948110273807448,0,0,43.5762695364849,2.70091641046965,4.78627129996192,3.64372959553707,3.90148514013002,6.24290861607247,14.973960874793,18.8768268451052,0,0,3.30792597082443,0,0,0,0,0,1.45740418314925,107.546675166096,0,0.206386867963223,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,2.86401185404534,0.632671987162271,1.62655573701479,0.756037385752609,1.04544148007234,1.9652630737156,1.21377911746339,1.81837602595739,0.523511883968059,1.42576470620972,1.24267862617385,2.25477175473676,0,0,0,0,0,0,0,0,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51146472241848,0.563047426353546,0,0.214368379079066,0.501572104035363,175.073071211291,155.589929939426,163.848116843667,130.95212494589,144.552411671606,144.280234401433,129.604320044507,145.453748641423,153.162134236661,141.348565108247,2.17953429926771,4.38927360741134,4.60980735536162,6.56388136084394,10.2710449687711,11.7659845408009,7.55638874525492,6.79915688888351,14.7622836412235,9.6024940470243,8.87177549615839,9.61994341068989,7.02311306024118,8.70742072706222,9.59172331558742,12.859929664643,10.429589335037,8.10218725947561,8.65380391686944,6.91834924631667,5.82877729055206,6.21165321557681,5.00715998889374,9.44751708110135,9.41093804153306,9.05376304440939,6.40247905054704,7.89209134313529,6.24698923690964,9.53941861818155,6.99946606932627,6.79680928391388,8.18462086339379,9.76102099471586,6.75173138433995,20.2346568129736,5.84829021113521,6.87587372954555,3.82576664137687,1.76473135295612,2.31867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.9176840142634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,47.5443683020055,47.609188134483,43.1005354384202,0,0,0,0,0,0.898800331555214,2.68952813725088,10.6800300677732,8.23536223823313,7.99234853135252,65.9853773972786,51.462370041726,18.1286382838132,12.9391385874619,12.8690630125403,116.722833859352,109.683423415176,117.048178341258,56.7111037239834,64.4073010960964,40.6312429034273,121.723787564602,101.860032415734,113.9874928415,60.6934886075755,55.382583830851,55.3606354101143,1.21161909333094,4.30757892608677,0,0,0,0,0,0,6.46044332606059,0,0,0,0.422530259330042,0,0,0,0,0,0,2.96878087269556,0,4.60170631100957,1.56136794089522,4.56698217468212,3.92046345335299,5.72746034099966,3.41007250693544,1.63366568728578,0,0.144599356919912,0,0.323533699894818,0,0,1.86391761218122,58.2633786052979,51.7333365829234,1.27728527604296,0,0,0,132.265134594458,121.695160349755,54.9109518733217,154.182172010549,139.876355159691,116.153516908794,108.53940499233,0,0,0,3.99839526184301,1.43132487258974,2.75882525320168,6.30217454318722,4.21973489940002,4.28629944653366,3.45907044769094,3.84177070694888,8.2785078636485,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0.134206418760372,172.437757822584,34.7817589841981,0,0.264450566663544,0.213288250535234,0.928946687441754,1.67527699718721,1.00841762311671,1.33426826306922,2.28270751335071,0.474529061544512,1.4822905925161,1.75934646160189,2.38747766449381,1.9496408711912,0.898819408654221,1.51296634912286,0.398282546508734,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0.420814919341911,0.189709611372772,0.147610147979602,0.627994911365499,0.123397163921801,0,0.333690211432188,0,0.449724224769707,0.811440485554012,0,0.763877555344259,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0.54390568381871,0,0,103.715681132114,86.5022247050459,0,0,3.15508219416257,3.12350995437311,5.38558494331997,1.19484398976276,2.00518806674155,1.98153571552183,4.04810701674894,5.55286130031493,2.37172666767914,121.138136291021,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0.565815239267694,0,0.614870295887855,0.775284879504663,0,0.356497378384721,0.948110273807448,0,0,43.5762695364849,2.70091641046965,4.78627129996192,3.64372959553707,3.90148514013002,6.24290861607247,14.973960874793,18.8768268451052,0,0,3.30792597082443,0,0,0,0,0,1.45740418314925,107.546675166096,0,0.206386867963223,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,2.86401185404534,0.632671987162271,1.62655573701479,0.756037385752609,1.04544148007234,1.9652630737156,1.21377911746339,1.81837602595739,0.523511883968059,1.42576470620972,1.24267862617385,2.25477175473676,0,0,0,0,0,0,0,0,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51146472241848,0.563047426353546,0,0.214368379079066,0.501572104035363,175.073071211291,155.589929939426,163.848116843667,130.95212494589,144.552411671606,144.280234401433,129.604320044507,145.453748641423,153.162134236661,141.348565108247,2.17953429926771,4.38927360741134,4.60980735536162,6.56388136084394,10.2710449687711,11.7659845408009,7.55638874525492,6.79915688888351,14.7622836412235,9.6024940470243,8.87177549615839,9.61994341068989,7.02311306024118,8.70742072706222,9.59172331558742,12.859929664643,10.429589335037,8.10218725947561,8.65380391686944,6.91834924631667,5.82877729055206,6.21165321557681,5.00715998889374,9.44751708110135,9.41093804153306,9.05376304440939,6.40247905054704,7.89209134313529,6.24698923690964,9.53941861818155,6.99946606932627,6.79680928391388,8.18462086339379,9.76102099471586,6.75173138433995,20.2346568129736,5.84829021113521,6.87587372954555,3.82576664137687,1.76473135295612,2.31867835620421
|short_description=p2@Epb4.9
}}
}}

Latest revision as of 08:48, 26 September 2015

Short description:p2@Epb4.9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Epb4.9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_uc007uoq.1_5end
EntrezGene:Epb4.9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Epb4.9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C347.54
Mouse Granule cells, donor2.CNhs12357.11731-123E347.61
Mouse Granule cells, donor3.CNhs12108.11636-122C743.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F165.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D551.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3116.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3109.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7117.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D456.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F464.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D840.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4121.72
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5101.86
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6113.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D660.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F655.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E155.36
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B258.26
cerebellum, neonate N30.CNhs11135.1395-42I251.73
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4132.27
corpus striatum, adult.CNhs10487.19-21D8121.70
corpus striatum, neonate N00.CNhs11226.630-43F154.91
cortex, adult.CNhs10473.12-14D5154.18
cortex, neonate N30.CNhs11107.1392-42F2139.88
diencephalon, adult.CNhs10482.20-12F2116.15
diencephalon, neonate N30.CNhs11201.1388-42B2108.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C64.29
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E8172.44
hippocampus, neonate N00.CNhs11228.627-43G134.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2103.72
medulla oblongata, neonate N30.CNhs11200.1396-42A386.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I9121.14
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G843.58
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F514.97
pituitary gland, neonate N00.CNhs11190.1308-22E918.88
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C9107.55
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1175.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2155.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3163.85
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7130.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4144.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5144.28
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6129.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7145.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8153.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9141.35
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F211.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.76
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I520.23
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C26.88
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.19e-1523
neuroblast (sensu Vertebrata)1.19e-1523
neuron1.62e-1533
neuronal stem cell1.62e-1533
neuroblast1.62e-1533
electrically signaling cell1.62e-1533
electrically responsive cell3.14e-1139
electrically active cell3.14e-1139
neural cell4.16e-1143
ectodermal cell1.42e-1044
neurectodermal cell1.42e-1044

Uber anatomy
Ontology termp-valuen
nervous system4.05e-3375
central nervous system8.59e-3373
neurectoderm6.17e-3264
neural plate6.17e-3264
presumptive neural plate6.17e-3264
regional part of nervous system9.79e-3154
neural tube5.37e-2952
neural rod5.37e-2952
future spinal cord5.37e-2952
neural keel5.37e-2952
ectoderm-derived structure6.92e-2995
ectoderm6.92e-2995
presumptive ectoderm6.92e-2995
pre-chordal neural plate2.01e-2549
brain2.47e-2547
future brain2.47e-2547
ecto-epithelium8.17e-2573
regional part of brain1.70e-2446
anterior neural tube1.61e-2340
regional part of forebrain1.18e-2239
forebrain1.18e-2239
future forebrain1.18e-2239
gray matter7.65e-2234
structure with developmental contribution from neural crest1.07e-1992
brain grey matter2.35e-1829
regional part of telencephalon2.35e-1829
telencephalon2.35e-1829
cerebral cortex1.18e-1221
cerebral hemisphere1.18e-1221
pallium1.18e-1221
regional part of cerebral cortex1.55e-1017
occipital lobe5.91e-1010
visual cortex5.91e-1010
neocortex5.91e-1010
basal ganglion5.83e-078
nuclear complex of neuraxis5.83e-078
aggregate regional part of brain5.83e-078
collection of basal ganglia5.83e-078
cerebral subcortex5.83e-078
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