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FFCP PHASE1:Mm9::chr9:26541328..26541400,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:26541328..26541400,+
|DHSsupport=NA
|short_description=p1@B3gat1
|DPIdataset=NA
|description=CAGE_peak_1_at_B3gat1_5end
|association_with_transcript=0bp_to_ENSMUST00000161431,uc009opo.1,uc009opp.1,uc009opq.1_5end
|EntrezGene=76898
|EntrezGene=76898
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q9CW73,Q6PIG8,Q8R531
|UniProt=Q9CW73,Q6PIG8,Q8R531
|association_with_transcript=0bp_to_ENSMUST00000161431,uc009opo.1,uc009opp.1,uc009opq.1_5end
|cluster_id=chr9:26541328..26541400,+
|description=CAGE_peak_1_at_B3gat1_5end
|id=chr9:26541328..26541400,+
|ontology_enrichment_celltype=CL:0000221!1.08e-17!44;CL:0000133!1.08e-17!44;CL:0002319!1.48e-17!43;CL:0000540!2.51e-17!33;CL:0000047!2.51e-17!33;CL:0000031!2.51e-17!33;CL:0000404!2.51e-17!33;CL:0000117!4.20e-16!23;CL:0000337!4.20e-16!23;CL:0000055!2.19e-12!50;CL:0000393!4.12e-12!39;CL:0000211!4.12e-12!39
|ontology_enrichment_celltype_v019_2=CL:0000540,8.38e-21,33;CL:0000047,8.38e-21,33;CL:0000031,8.38e-21,33;CL:0000404,8.38e-21,33;CL:0000117,2.62e-19,23;CL:0000337,2.62e-19,23;CL:0000221,3.93e-19,44;CL:0000133,3.93e-19,44;CL:0002319,5.95e-19,43;CL:0000393,1.42e-15,39;CL:0000211,1.42e-15,39;CL:0002321,4.94e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.48e-35!75;UBERON:0001016!2.48e-35!75;UBERON:0001017!2.67e-35!73;UBERON:0005743!2.67e-35!73;UBERON:0004121!2.27e-32!102;UBERON:0000924!2.27e-32!102;UBERON:0006601!2.27e-32!102;UBERON:0002346!9.98e-30!71;UBERON:0003075!9.98e-30!71;UBERON:0007284!9.98e-30!71;UBERON:0001049!4.24e-27!52;UBERON:0005068!4.24e-27!52;UBERON:0006241!4.24e-27!52;UBERON:0007135!4.24e-27!52;UBERON:0000033!1.10e-26!63;UBERON:0000955!4.31e-25!50;UBERON:0006238!4.31e-25!50;UBERON:0002616!1.79e-24!49;UBERON:0003056!2.45e-23!49;UBERON:0002020!5.23e-23!34;UBERON:0003080!3.43e-21!40;UBERON:0002780!1.47e-20!39;UBERON:0001890!1.47e-20!39;UBERON:0006240!1.47e-20!39;UBERON:0002791!2.94e-19!29;UBERON:0003528!2.94e-19!29;UBERON:0001893!2.94e-19!29;UBERON:0000956!2.67e-14!21;UBERON:0001869!2.67e-14!21;UBERON:0000203!2.67e-14!21;UBERON:0007811!6.40e-14!86;UBERON:0000153!2.90e-13!94;UBERON:0002619!2.69e-11!17;UBERON:0002021!3.07e-08!10;UBERON:0000411!3.07e-08!10;UBERON:0001950!3.07e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.06e-41,73;UBERON:0001016,1.45e-39,75;UBERON:0002346,7.53e-36,64;UBERON:0003075,7.53e-36,64;UBERON:0007284,7.53e-36,64;UBERON:0004121,1.02e-35,95;UBERON:0000924,1.02e-35,95;UBERON:0006601,1.02e-35,95;UBERON:0000073,8.88e-34,54;UBERON:0001049,3.27e-32,52;UBERON:0005068,3.27e-32,52;UBERON:0006241,3.27e-32,52;UBERON:0007135,3.27e-32,52;UBERON:0010371,1.97e-30,73;UBERON:0002020,9.56e-28,34;UBERON:0000955,1.61e-27,47;UBERON:0006238,1.61e-27,47;UBERON:0003056,2.12e-27,49;UBERON:0002616,8.89e-27,46;UBERON:0003080,9.46e-25,40;UBERON:0002780,5.57e-24,39;UBERON:0001890,5.57e-24,39;UBERON:0006240,5.57e-24,39;UBERON:0003528,3.66e-23,29;UBERON:0002791,3.66e-23,29;UBERON:0001893,3.66e-23,29;UBERON:0010314,7.08e-23,92;UBERON:0000956,4.18e-17,21;UBERON:0001869,4.18e-17,21;UBERON:0000203,4.18e-17,21;UBERON:0002619,1.94e-13,17;UBERON:0002021,1.03e-09,10;UBERON:0000411,1.03e-09,10;UBERON:0001950,1.03e-09,10;UBERON:0003076,9.39e-08,12;UBERON:0003057,9.39e-08,12;UBERON:0002420,3.56e-07,8;UBERON:0007245,3.56e-07,8;UBERON:0010009,3.56e-07,8;UBERON:0010011,3.56e-07,8;UBERON:0000454,3.56e-07,8
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,10.7154545590348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72100625521786,5.27246838562732,1.36100929351998,0.419959264876088,4.31257693094915,0,0,0,0,0,0,73.0362423703148,54.4860708650194,80.4965882452848,0,0,0.449949858640699,0,0,8.98800331555214,10.7581125490035,75.4860377605717,106.384679405372,83.4990096564987,76.5544638202194,72.003144350226,47.0364668985424,38.4340338783128,69.8606277823616,31.9336054898227,46.3505037249231,39.9376986466233,86.7811773264676,63.9498628780843,66.6769114312653,32.943593882163,28.138130501584,29.9484565642548,73.9517749538906,64.9214864443909,86.4893428629395,0.908714319998209,0.755715601067855,0,0,0,0.539703191637817,0,0,2.52799956237153,0,0,0,2.67602497575693,0,0,0,0,0,0,1.25602267690966,0,0,1.38788261412909,3.65358573974569,1.61430848079241,3.01445281105245,1.52865319276416,0.376999773989026,0,0,0,0.970601099684455,0,0,0,15.517382241612,19.8974371472782,0,0,0,0,49.1313297247818,42.5475560621323,68.1046588451725,77.5256468057553,76.9703526564295,41.3498208673525,53.2151342862245,0.916554274652847,0,0,4.41927897361595,1.04096354370163,3.67843367093557,3.60124259610698,4.52114453507145,7.62008790494872,5.76511741281824,9.46387418053261,19.1440494346872,0.215567992932842,0.567318240503458,0.351902248327898,0,0.556094498451196,1.0447564995665,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.5925000428814,52.9958753753315,0.330418782983798,0,0.853153002140936,0.928946687441754,0.515469845288373,0.605050573870028,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.571242563048644,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4541508879124,33.6397540519623,0,0.252470927204373,3.78609863299508,3.51394869866975,2.15423397732799,1.43381278771531,3.7875774594007,5.66153061577665,6.07216052512342,7.59865230569411,8.30104333687699,38.5585579706168,0.425820255624806,3.5613120733451,1.95464351224291,0.329940245945071,0,0.728341908464944,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,3.42116078659489,2.71653235943784,1.92903331528433,2.83744373827638,2.14042581122485,2.46823530903181,2.13125464380219,0,0,0,0,0,0,0.119372344003136,0.328281799490123,0,33.7474049659128,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.86404272657441,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.496375471371293,0.583353565032143,1.03327858782185,0.168956125490778,0.704143431874524,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0.187682475451182,0.183151624267265,0,0,87.5365356056453,78.2552902062201,81.9240584218337,109.470477152929,71.2485820561468,58.1653300990069,62.7770925215579,60.7933624352698,63.8930796667728,66.2733199042329,1.764384908931,11.1726964552289,7.17081144167364,13.3708694387562,12.157563432423,13.420576116851,8.00088220085815,12.3621034343337,14.4413644316317,10.8659801058433,8.11133759648767,9.24269072791773,11.5179054187955,11.8446531949008,10.8553036326109,14.7651044297753,11.3566639425958,13.3107362119956,10.714233420886,10.745521169811,6.17164654293748,7.45398385869217,10.9680647375768,9.73820991436601,11.104906889009,8.88453382862603,10.9756783723664,9.47050961176234,10.4569167661314,9.53941861818155,11.1516917036724,11.9190423674432,8.18462086339379,11.0005157242036,9.64533054905707,30.9765116643053,9.59119594626174,9.45432637812513,2.86932498103265,2.42650561031467,2.08681052058379
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,10.7154545590348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72100625521786,5.27246838562732,1.36100929351998,0.419959264876088,4.31257693094915,0,0,0,0,0,0,73.0362423703148,54.4860708650194,80.4965882452848,0,0,0.449949858640699,0,0,8.98800331555214,10.7581125490035,75.4860377605717,106.384679405372,83.4990096564987,76.5544638202194,72.003144350226,47.0364668985424,38.4340338783128,69.8606277823616,31.9336054898227,46.3505037249231,39.9376986466233,86.7811773264676,63.9498628780843,66.6769114312653,32.943593882163,28.138130501584,29.9484565642548,73.9517749538906,64.9214864443909,86.4893428629395,0.908714319998209,0.755715601067855,0,0,0,0.539703191637817,0,0,2.52799956237153,0,0,0,2.67602497575693,0,0,0,0,0,0,1.25602267690966,0,0,1.38788261412909,3.65358573974569,1.61430848079241,3.01445281105245,1.52865319276416,0.376999773989026,0,0,0,0.970601099684455,0,0,0,15.517382241612,19.8974371472782,0,0,0,0,49.1313297247818,42.5475560621323,68.1046588451725,77.5256468057553,76.9703526564295,41.3498208673525,53.2151342862245,0.916554274652847,0,0,4.41927897361595,1.04096354370163,3.67843367093557,3.60124259610698,4.52114453507145,7.62008790494872,5.76511741281824,9.46387418053261,19.1440494346872,0.215567992932842,0.567318240503458,0.351902248327898,0,0.556094498451196,1.0447564995665,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,81.5925000428814,52.9958753753315,0.330418782983798,0,0.853153002140936,0.928946687441754,0.515469845288373,0.605050573870028,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.571242563048644,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4541508879124,33.6397540519623,0,0.252470927204373,3.78609863299508,3.51394869866975,2.15423397732799,1.43381278771531,3.7875774594007,5.66153061577665,6.07216052512342,7.59865230569411,8.30104333687699,38.5585579706168,0.425820255624806,3.5613120733451,1.95464351224291,0.329940245945071,0,0.728341908464944,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,3.42116078659489,2.71653235943784,1.92903331528433,2.83744373827638,2.14042581122485,2.46823530903181,2.13125464380219,0,0,0,0,0,0,0.119372344003136,0.328281799490123,0,33.7474049659128,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.632671987162271,0.609958401380546,0.86404272657441,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.496375471371293,0.583353565032143,1.03327858782185,0.168956125490778,0.704143431874524,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0.187682475451182,0.183151624267265,0,0,87.5365356056453,78.2552902062201,81.9240584218337,109.470477152929,71.2485820561468,58.1653300990069,62.7770925215579,60.7933624352698,63.8930796667728,66.2733199042329,1.764384908931,11.1726964552289,7.17081144167364,13.3708694387562,12.157563432423,13.420576116851,8.00088220085815,12.3621034343337,14.4413644316317,10.8659801058433,8.11133759648767,9.24269072791773,11.5179054187955,11.8446531949008,10.8553036326109,14.7651044297753,11.3566639425958,13.3107362119956,10.714233420886,10.745521169811,6.17164654293748,7.45398385869217,10.9680647375768,9.73820991436601,11.104906889009,8.88453382862603,10.9756783723664,9.47050961176234,10.4569167661314,9.53941861818155,11.1516917036724,11.9190423674432,8.18462086339379,11.0005157242036,9.64533054905707,30.9765116643053,9.59119594626174,9.45432637812513,2.86932498103265,2.42650561031467,2.08681052058379
|short_description=p1@B3gat1
}}
}}

Latest revision as of 12:23, 26 September 2015

Short description:p1@B3gat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_B3gat1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000161431, uc009opo.1, uc009opp.1, uc009opq.1_5end
EntrezGene:B3gat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@B3gat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C373.04
Mouse Granule cells, donor2.CNhs12357.11731-123E354.49
Mouse Granule cells, donor3.CNhs12108.11636-122C780.50
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C88.99
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D575.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5106.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D983.50
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F176.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D572.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D247.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F238.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D669.86
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.35
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.94
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D486.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F463.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D866.68
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D673.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F664.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E186.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I219.90
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A449.13
corpus striatum, adult.CNhs10487.19-21D842.55
corpus striatum, neonate N00.CNhs11226.630-43F168.10
cortex, adult.CNhs10473.12-14D577.53
cortex, neonate N30.CNhs11107.1392-42F276.97
diencephalon, adult.CNhs10482.20-12F241.35
diencephalon, neonate N30.CNhs11201.1388-42B253.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C67.62
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G89.46
eyeball, neonate N16.CNhs11188.777-19A219.14
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E881.59
hippocampus, neonate N00.CNhs11228.627-43G153.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C227.45
medulla oblongata, neonate N30.CNhs11200.1396-42A333.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I938.56
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C933.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A187.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A278.26
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A381.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7109.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A471.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A558.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A760.79
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A863.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A966.27
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B112.16
whole body, embryo E16.CNhs10514.453-14F213.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.00
whole body, embryo E17.5.CNhs10513.490-9F99.65
whole body, embryo E17.CNhs10517.475-3I530.98
whole body, embryo E18.CNhs10516.493-3B39.59
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron8.38e-2133
neuronal stem cell8.38e-2133
neuroblast8.38e-2133
electrically signaling cell8.38e-2133
CNS neuron (sensu Vertebrata)2.62e-1923
neuroblast (sensu Vertebrata)2.62e-1923
ectodermal cell3.93e-1944
neurectodermal cell3.93e-1944
neural cell5.95e-1943
electrically responsive cell1.42e-1539
electrically active cell1.42e-1539
embryonic cell4.94e-0770

Uber anatomy
Ontology termp-valuen
central nervous system2.06e-4173
nervous system1.45e-3975
neurectoderm7.53e-3664
neural plate7.53e-3664
presumptive neural plate7.53e-3664
ectoderm-derived structure1.02e-3595
ectoderm1.02e-3595
presumptive ectoderm1.02e-3595
regional part of nervous system8.88e-3454
neural tube3.27e-3252
neural rod3.27e-3252
future spinal cord3.27e-3252
neural keel3.27e-3252
ecto-epithelium1.97e-3073
gray matter9.56e-2834
brain1.61e-2747
future brain1.61e-2747
pre-chordal neural plate2.12e-2749
regional part of brain8.89e-2746
anterior neural tube9.46e-2540
regional part of forebrain5.57e-2439
forebrain5.57e-2439
future forebrain5.57e-2439
brain grey matter3.66e-2329
regional part of telencephalon3.66e-2329
telencephalon3.66e-2329
structure with developmental contribution from neural crest7.08e-2392
cerebral cortex4.18e-1721
cerebral hemisphere4.18e-1721
pallium4.18e-1721
regional part of cerebral cortex1.94e-1317
occipital lobe1.03e-0910
visual cortex1.03e-0910
neocortex1.03e-0910
posterior neural tube9.39e-0812
chordal neural plate9.39e-0812
basal ganglion3.56e-078
nuclear complex of neuraxis3.56e-078
aggregate regional part of brain3.56e-078
collection of basal ganglia3.56e-078
cerebral subcortex3.56e-078
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