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FFCP PHASE1:Mm9::chr15:100701058..100701098,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20273
|EntrezGene=20273
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9WTU3
|UniProt=Q9WTU3
|association_with_transcript=-15bp_to_NM_001077499,uc007xsg.1,uc007xsh.1_5end
|association_with_transcript=-15bp_to_NM_001077499,uc007xsg.1,uc007xsh.1_5end
|cluster_id=chr15:100701058..100701098,+
|description=CAGE_peak_2_at_Scn8a_5end
|description=CAGE_peak_2_at_Scn8a_5end
|id=chr15:100701058..100701098,+
|id=chr15:100701058..100701098,+
|ontology_enrichment_celltype=CL:0000540!1.21e-09!33;CL:0000047!1.21e-09!33;CL:0000031!1.21e-09!33;CL:0000404!1.21e-09!33;CL:0000221!1.19e-08!44;CL:0000133!1.19e-08!44;CL:0002319!3.15e-08!43;CL:0000117!4.71e-07!23;CL:0000337!4.71e-07!23
|ontology_enrichment_celltype=CL:0000540!1.21e-09!33;CL:0000047!1.21e-09!33;CL:0000031!1.21e-09!33;CL:0000404!1.21e-09!33;CL:0000221!1.19e-08!44;CL:0000133!1.19e-08!44;CL:0002319!3.15e-08!43;CL:0000117!4.71e-07!23;CL:0000337!4.71e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.10e-09,23;CL:0000337,9.10e-09,23;CL:0000540,1.79e-07,33;CL:0000047,1.79e-07,33;CL:0000031,1.79e-07,33;CL:0000404,1.79e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.79e-29!71;UBERON:0003075!3.79e-29!71;UBERON:0007284!3.79e-29!71;UBERON:0000073!2.87e-28!75;UBERON:0001016!2.87e-28!75;UBERON:0004121!4.26e-28!102;UBERON:0000924!4.26e-28!102;UBERON:0006601!4.26e-28!102;UBERON:0001017!1.52e-27!73;UBERON:0005743!1.52e-27!73;UBERON:0000033!2.06e-25!63;UBERON:0001049!8.44e-25!52;UBERON:0005068!8.44e-25!52;UBERON:0006241!8.44e-25!52;UBERON:0007135!8.44e-25!52;UBERON:0000955!1.24e-23!50;UBERON:0006238!1.24e-23!50;UBERON:0002616!6.43e-23!49;UBERON:0003056!2.64e-19!49;UBERON:0003080!4.33e-17!40;UBERON:0002780!2.15e-16!39;UBERON:0001890!2.15e-16!39;UBERON:0006240!2.15e-16!39;UBERON:0002020!9.76e-15!34;UBERON:0007811!9.54e-14!86;UBERON:0000153!7.03e-12!94;UBERON:0002791!7.90e-12!29;UBERON:0003528!7.90e-12!29;UBERON:0001893!7.90e-12!29;UBERON:0002021!7.18e-09!10;UBERON:0000411!7.18e-09!10;UBERON:0001950!7.18e-09!10;UBERON:0003076!2.06e-08!12;UBERON:0003057!2.06e-08!12;UBERON:0000956!1.10e-07!21;UBERON:0001869!1.10e-07!21;UBERON:0000203!1.10e-07!21;UBERON:0002619!4.80e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.58e-42,54;UBERON:0001049,9.70e-39,52;UBERON:0005068,9.70e-39,52;UBERON:0006241,9.70e-39,52;UBERON:0007135,9.70e-39,52;UBERON:0001016,3.42e-37,75;UBERON:0001017,1.48e-36,73;UBERON:0002346,1.19e-35,64;UBERON:0003075,1.19e-35,64;UBERON:0007284,1.19e-35,64;UBERON:0004121,4.35e-32,95;UBERON:0000924,4.35e-32,95;UBERON:0006601,4.35e-32,95;UBERON:0000955,2.73e-31,47;UBERON:0006238,2.73e-31,47;UBERON:0010371,4.16e-30,73;UBERON:0002616,8.76e-30,46;UBERON:0002020,2.52e-27,34;UBERON:0003080,9.02e-25,40;UBERON:0003056,3.20e-24,49;UBERON:0002780,2.77e-23,39;UBERON:0001890,2.77e-23,39;UBERON:0006240,2.77e-23,39;UBERON:0010314,5.75e-22,92;UBERON:0003528,1.54e-20,29;UBERON:0002791,1.54e-20,29;UBERON:0001893,1.54e-20,29;UBERON:0002021,1.37e-19,10;UBERON:0000411,1.37e-19,10;UBERON:0001950,1.37e-19,10;UBERON:0002619,2.78e-15,17;UBERON:0003076,1.72e-14,12;UBERON:0003057,1.72e-14,12;UBERON:0000956,4.06e-14,21;UBERON:0001869,4.06e-14,21;UBERON:0000203,4.06e-14,21;UBERON:0000025,7.08e-13,114;UBERON:0004111,1.82e-11,122;UBERON:0002240,1.98e-10,6;UBERON:0005174,1.98e-10,6;UBERON:0001137,1.98e-10,6;UBERON:0011216,5.18e-09,194;UBERON:0001948,1.94e-08,5;UBERON:0002315,1.94e-08,5;UBERON:0002950,6.86e-08,4;UBERON:0001891,6.86e-08,4;UBERON:0009616,6.86e-08,4;UBERON:0010286,6.86e-08,4;UBERON:0002420,1.22e-07,8;UBERON:0007245,1.22e-07,8;UBERON:0010009,1.22e-07,8;UBERON:0010011,1.22e-07,8;UBERON:0000454,1.22e-07,8;UBERON:0000483,2.70e-07,174;UBERON:0000119,4.12e-07,176
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0,0.630974884054146,2.85650984403804,1.54607978666129,0.122490799214954,0.383381884072945,0,7.70811166995721,11.2364857514965,8.60196586234964,0.395658863190582,0.548925861614458,1.04182674111352,8.09630697104005,3.93933827022176,5.04234217663473,1.17851434189467,1.56608848879013,1.67759501242771,0.227178579999552,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,9.9545470983926,12.1479089951804,0,0,0,0,8.38827580667007,10.0650132620098,1.50785222535437,14.2535942557667,15.3429274398198,7.89594569326328,12.8170597823529,0,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.452114453507145,0.816437989815934,1.0249097622788,1.12442069471675,2.06962696591213,0.431135985865684,0,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4071069652835,2.16099685996497,0,0,0,0.232236671860439,0.38660238396628,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.193952487167626,0.350679099451593,0.505892296994058,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0.585400943573396,0.157635144106191,0.664394068946325,0.159454768657487,0,0,0.144649058581512,0,0,0,0,15.7339578188036,13.4793439581034,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,1.11399337041197,1.98153571552183,0.809621403349789,0.876767573733936,0,7.71171159412337,0,0.178065603667255,0.488660878060728,0,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,2.04263763452273,1.08036656418786,0.517434735131018,0.214337035031592,1.06404140185364,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0,0,0,0.241251699712623,0.119372344003136,0,0.291480836629851,17.8008289930089,0,0.206386867963223,1.11116716421827,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0,0.104859344425711,0.966336483304024,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,11.8597886949584,7.82552902062201,8.02053718815155,11.6860163993708,15.7568979547248,17.3740596399631,11.4753825039407,12.6089936902782,11.7817026335893,10.3552062350364,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0.888986911206461,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.574354689556133,0.476293691283074,0.579421629724277,0.38581844092741,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0,0.376437521661322,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0.192906610981141,1.24905288968973,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0,0.630974884054146,2.85650984403804,1.54607978666129,0.122490799214954,0.383381884072945,0,7.70811166995721,11.2364857514965,8.60196586234964,0.395658863190582,0.548925861614458,1.04182674111352,8.09630697104005,3.93933827022176,5.04234217663473,1.17851434189467,1.56608848879013,1.67759501242771,0.227178579999552,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0.220841518460394,0,0,9.9545470983926,12.1479089951804,0,0,0,0,8.38827580667007,10.0650132620098,1.50785222535437,14.2535942557667,15.3429274398198,7.89594569326328,12.8170597823529,0,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0,0.452114453507145,0.816437989815934,1.0249097622788,1.12442069471675,2.06962696591213,0.431135985865684,0,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4071069652835,2.16099685996497,0,0,0,0.232236671860439,0.38660238396628,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.610953983535943,0.193952487167626,0.350679099451593,0.505892296994058,0,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.568474235311454,0.325929952884052,0.169745085775188,0,0.335012514883631,0,0.585400943573396,0.157635144106191,0.664394068946325,0.159454768657487,0,0,0.144649058581512,0,0,0,0,15.7339578188036,13.4793439581034,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,1.11399337041197,1.98153571552183,0.809621403349789,0.876767573733936,0,7.71171159412337,0,0.178065603667255,0.488660878060728,0,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,2.04263763452273,1.08036656418786,0.517434735131018,0.214337035031592,1.06404140185364,0.535106452806212,0.493647061806363,0.608929898229199,0,0,0,0,0,0.241251699712623,0.119372344003136,0,0.291480836629851,17.8008289930089,0,0.206386867963223,1.11116716421827,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0,0.234714477291508,0,0.104859344425711,0.966336483304024,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0,0,11.8597886949584,7.82552902062201,8.02053718815155,11.6860163993708,15.7568979547248,17.3740596399631,11.4753825039407,12.6089936902782,11.7817026335893,10.3552062350364,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0.888986911206461,0.412070114477788,0.962757628775446,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.574354689556133,0.476293691283074,0.579421629724277,0.38581844092741,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0,0.376437521661322,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0.192906610981141,1.24905288968973,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p2@Scn8a
|short_description=p2@Scn8a
}}
}}

Latest revision as of 12:35, 26 September 2015

Short description:p2@Scn8a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scn8a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -15bp_to_NM_001077499, uc007xsg.1, uc007xsh.1_5end
EntrezGene:Scn8a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scn8a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I212.15
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.39
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B212.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A313.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C917.80
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.10e-0923
neuroblast (sensu Vertebrata)9.10e-0923
neuron1.79e-0733
neuronal stem cell1.79e-0733
neuroblast1.79e-0733
electrically signaling cell1.79e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.58e-4254
neural tube9.70e-3952
neural rod9.70e-3952
future spinal cord9.70e-3952
neural keel9.70e-3952
nervous system3.42e-3775
central nervous system1.48e-3673
neurectoderm1.19e-3564
neural plate1.19e-3564
presumptive neural plate1.19e-3564
ectoderm-derived structure4.35e-3295
ectoderm4.35e-3295
presumptive ectoderm4.35e-3295
brain2.73e-3147
future brain2.73e-3147
ecto-epithelium4.16e-3073
regional part of brain8.76e-3046
gray matter2.52e-2734
anterior neural tube9.02e-2540
pre-chordal neural plate3.20e-2449
regional part of forebrain2.77e-2339
forebrain2.77e-2339
future forebrain2.77e-2339
structure with developmental contribution from neural crest5.75e-2292
brain grey matter1.54e-2029
regional part of telencephalon1.54e-2029
telencephalon1.54e-2029
occipital lobe1.37e-1910
visual cortex1.37e-1910
neocortex1.37e-1910
regional part of cerebral cortex2.78e-1517
posterior neural tube1.72e-1412
chordal neural plate1.72e-1412
cerebral cortex4.06e-1421
cerebral hemisphere4.06e-1421
pallium4.06e-1421
tube7.08e-13114
anatomical conduit1.82e-11122
spinal cord1.98e-106
dorsal region element1.98e-106
dorsum1.98e-106
organ system subdivision5.18e-09194
regional part of spinal cord1.94e-085
gray matter of spinal cord1.94e-085
regional part of midbrain6.86e-084
midbrain6.86e-084
presumptive midbrain6.86e-084
midbrain neural tube6.86e-084
basal ganglion1.22e-078
nuclear complex of neuraxis1.22e-078
aggregate regional part of brain1.22e-078
collection of basal ganglia1.22e-078
cerebral subcortex1.22e-078
epithelium2.70e-07174
cell layer4.12e-07176
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