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FFCP PHASE1:Mm9::chr9:29220045..29220088,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=235106
|EntrezGene=235106
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q99PJ0
|UniProt=Q99PJ0
|association_with_transcript=-256bp_to_ENSMUST00000115237_5end
|association_with_transcript=-256bp_to_ENSMUST00000115237_5end
|cluster_id=chr9:29220045..29220088,-
|description=CAGE_peak_3_at_Ntm_5end
|description=CAGE_peak_3_at_Ntm_5end
|id=chr9:29220045..29220088,-
|id=chr9:29220045..29220088,-
|ontology_enrichment_celltype=CL:0000117!1.85e-09!23;CL:0000337!1.85e-09!23;CL:0000540!1.77e-07!33;CL:0000047!1.77e-07!33;CL:0000031!1.77e-07!33;CL:0000404!1.77e-07!33
|ontology_enrichment_celltype=CL:0000117!1.85e-09!23;CL:0000337!1.85e-09!23;CL:0000540!1.77e-07!33;CL:0000047!1.77e-07!33;CL:0000031!1.77e-07!33;CL:0000404!1.77e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.31e-14,23;CL:0000337,5.31e-14,23;CL:0000540,2.79e-08,33;CL:0000047,2.79e-08,33;CL:0000031,2.79e-08,33;CL:0000404,2.79e-08,33;CL:0002319,9.14e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!9.66e-21!63;UBERON:0000073!4.80e-20!75;UBERON:0001016!4.80e-20!75;UBERON:0002346!1.31e-19!71;UBERON:0003075!1.31e-19!71;UBERON:0007284!1.31e-19!71;UBERON:0001049!1.71e-19!52;UBERON:0005068!1.71e-19!52;UBERON:0006241!1.71e-19!52;UBERON:0007135!1.71e-19!52;UBERON:0001017!3.85e-19!73;UBERON:0005743!3.85e-19!73;UBERON:0000955!3.30e-18!50;UBERON:0006238!3.30e-18!50;UBERON:0004121!5.50e-18!102;UBERON:0000924!5.50e-18!102;UBERON:0006601!5.50e-18!102;UBERON:0002616!1.66e-17!49;UBERON:0003056!7.82e-17!49;UBERON:0002020!7.41e-14!34;UBERON:0003080!1.21e-13!40;UBERON:0002780!4.53e-13!39;UBERON:0001890!4.53e-13!39;UBERON:0006240!4.53e-13!39;UBERON:0000153!5.31e-11!94;UBERON:0002791!9.39e-11!29;UBERON:0003528!9.39e-11!29;UBERON:0001893!9.39e-11!29;UBERON:0007811!1.16e-10!86;UBERON:0002021!3.87e-09!10;UBERON:0000411!3.87e-09!10;UBERON:0001950!3.87e-09!10;UBERON:0002619!9.68e-07!17;UBERON:0003076!9.80e-07!12;UBERON:0003057!9.80e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.72e-32,54;UBERON:0002346,1.05e-30,64;UBERON:0003075,1.05e-30,64;UBERON:0007284,1.05e-30,64;UBERON:0001016,9.26e-30,75;UBERON:0001049,1.74e-29,52;UBERON:0005068,1.74e-29,52;UBERON:0006241,1.74e-29,52;UBERON:0007135,1.74e-29,52;UBERON:0001017,3.71e-28,73;UBERON:0004121,5.20e-28,95;UBERON:0000924,5.20e-28,95;UBERON:0006601,5.20e-28,95;UBERON:0010371,2.59e-25,73;UBERON:0000955,7.84e-24,47;UBERON:0006238,7.84e-24,47;UBERON:0010314,5.91e-23,92;UBERON:0003056,9.09e-23,49;UBERON:0002616,1.25e-22,46;UBERON:0002020,7.12e-22,34;UBERON:0003080,1.22e-19,40;UBERON:0002780,1.25e-18,39;UBERON:0001890,1.25e-18,39;UBERON:0006240,1.25e-18,39;UBERON:0003528,3.08e-16,29;UBERON:0002791,3.08e-16,29;UBERON:0001893,3.08e-16,29;UBERON:0002021,8.00e-16,10;UBERON:0000411,8.00e-16,10;UBERON:0001950,8.00e-16,10;UBERON:0000025,1.18e-11,114;UBERON:0003076,1.76e-10,12;UBERON:0003057,1.76e-10,12;UBERON:0004111,4.08e-10,122;UBERON:0002619,9.49e-10,17;UBERON:0002420,1.20e-09,8;UBERON:0007245,1.20e-09,8;UBERON:0010009,1.20e-09,8;UBERON:0010011,1.20e-09,8;UBERON:0000454,1.20e-09,8;UBERON:0000956,8.09e-09,21;UBERON:0001869,8.09e-09,21;UBERON:0000203,8.09e-09,21;UBERON:0002240,1.94e-08,6;UBERON:0005174,1.94e-08,6;UBERON:0001137,1.94e-08,6;UBERON:0001948,2.08e-07,5;UBERON:0002315,2.08e-07,5
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,2.64495489636016,6.33831403506179,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,3.99911378165325,5.52171352379034,0.367472397644862,0.575072826109418,0,8.8092704799511,3.44755812830007,4.91540906419979,5.80299666012853,5.03182039813253,3.64639359389732,1.95428099300967,4.50210088025344,4.88954392885792,6.48182888042069,5.41012387036591,7.82877672466262,1.06016670666458,1.28471652181535,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0.970601099684455,0,0,0,24.3008061519584,28.2753054198164,0,0,0,0,4.49371918214468,4.57500602818627,1.00523481690292,19.2944995413427,20.7129520437568,4.98691306942944,8.92326946872667,0.203678727700633,0,0,0.420883711772948,0.260240885925407,1.14951052216736,0.720248519221397,2.10986744970001,3.40182495756639,1.92170580427275,1.40552586839593,1.29351685369508,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,1.44988040774851,1.17263029990548,1.2604344302271,1.89395788468168,1.37734962223183,0.925602677324269,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.492502392237286,0.162137619091711,0,0.219550115291051,0,4.6263788684108,0.92614151141356,0,0.264450566663544,0.853153002140936,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,1.14248512609729,0,0.203651327845314,0.775809948670503,0.911765658574141,0.505892296994058,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0.704070744865506,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,3.53211297973142,3.5163505977661,0,0,0.631016438832513,0,0.430846795465598,0,0.668396022247182,0.283076530788832,0,0,0.395287777946524,10.6036034419196,0,0.35613120733451,0.651547837414304,2.3095817216155,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0,0,0,1.36175842301515,0.900305470156551,1.16422815404479,1.50035924522115,0.354680467284547,0.178368817602071,1.15184314421485,0,0,0,0,0.16488625294148,0.645857706783622,0.120625849856312,0,0,0,3.8939313422207,0.170870880797853,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0,42.9211400388971,41.8895965221531,38.956894913879,43.3070019506093,47.955776383945,43.8128460486026,31.0510350106631,33.3237690385923,29.0011141749891,35.7254615108756,0.103787347584177,1.59609949360412,1.19513524027894,0.729320151204882,0.628839487883947,0.735374033800057,1.77797382241292,0.412070114477788,0.962757628775446,1.01078884705519,0.50695859978048,0.943131706930381,0.749132059759059,0.832326981263301,0.861532034334199,1.90517476513229,1.0429589335037,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.476872379894642,0.726732083161643,0.846984423737976,0.676916863133412,0.182927972872773,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,0.886540341380071,0.409231043169689,0.929621047115796,0,1.49886346762768,1.40358965067245,0.859484216193193,1.3390183244819,0.441182838239031,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,2.64495489636016,6.33831403506179,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,3.99911378165325,5.52171352379034,0.367472397644862,0.575072826109418,0,8.8092704799511,3.44755812830007,4.91540906419979,5.80299666012853,5.03182039813253,3.64639359389732,1.95428099300967,4.50210088025344,4.88954392885792,6.48182888042069,5.41012387036591,7.82877672466262,1.06016670666458,1.28471652181535,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0.970601099684455,0,0,0,24.3008061519584,28.2753054198164,0,0,0,0,4.49371918214468,4.57500602818627,1.00523481690292,19.2944995413427,20.7129520437568,4.98691306942944,8.92326946872667,0.203678727700633,0,0,0.420883711772948,0.260240885925407,1.14951052216736,0.720248519221397,2.10986744970001,3.40182495756639,1.92170580427275,1.40552586839593,1.29351685369508,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,1.44988040774851,1.17263029990548,1.2604344302271,1.89395788468168,1.37734962223183,0.925602677324269,0.232533944750408,0.268273401399619,0.467061369468678,0.658239399653922,0.492502392237286,0.162137619091711,0,0.219550115291051,0,4.6263788684108,0.92614151141356,0,0.264450566663544,0.853153002140936,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.379335801906163,1.14248512609729,0,0.203651327845314,0.775809948670503,0.911765658574141,0.505892296994058,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0.704070744865506,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,3.53211297973142,3.5163505977661,0,0,0.631016438832513,0,0.430846795465598,0,0.668396022247182,0.283076530788832,0,0,0.395287777946524,10.6036034419196,0,0.35613120733451,0.651547837414304,2.3095817216155,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0,0,0,1.36175842301515,0.900305470156551,1.16422815404479,1.50035924522115,0.354680467284547,0.178368817602071,1.15184314421485,0,0,0,0,0.16488625294148,0.645857706783622,0.120625849856312,0,0,0,3.8939313422207,0.170870880797853,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0.218362563746178,0.404593039154462,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0.389762468933385,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0,42.9211400388971,41.8895965221531,38.956894913879,43.3070019506093,47.955776383945,43.8128460486026,31.0510350106631,33.3237690385923,29.0011141749891,35.7254615108756,0.103787347584177,1.59609949360412,1.19513524027894,0.729320151204882,0.628839487883947,0.735374033800057,1.77797382241292,0.412070114477788,0.962757628775446,1.01078884705519,0.50695859978048,0.943131706930381,0.749132059759059,0.832326981263301,0.861532034334199,1.90517476513229,1.0429589335037,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.476872379894642,0.726732083161643,0.846984423737976,0.676916863133412,0.182927972872773,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,0.886540341380071,0.409231043169689,0.929621047115796,0,1.49886346762768,1.40358965067245,0.859484216193193,1.3390183244819,0.441182838239031,0
|short_description=p3@Ntm
|short_description=p3@Ntm
}}
}}

Latest revision as of 12:44, 26 September 2015

Short description:p3@Ntm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ntm_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -256bp_to_ENSMUST00000115237_5end
EntrezGene:Ntm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ntm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.30
cerebellum, neonate N30.CNhs11135.1395-42I228.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D519.29
cortex, neonate N30.CNhs11107.1392-42F220.71
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B28.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.92
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.96
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D743.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A447.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.73
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.31e-1423
neuroblast (sensu Vertebrata)5.31e-1423
neuron2.79e-0833
neuronal stem cell2.79e-0833
neuroblast2.79e-0833
electrically signaling cell2.79e-0833
neural cell9.14e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.72e-3254
neurectoderm1.05e-3064
neural plate1.05e-3064
presumptive neural plate1.05e-3064
nervous system9.26e-3075
neural tube1.74e-2952
neural rod1.74e-2952
future spinal cord1.74e-2952
neural keel1.74e-2952
central nervous system3.71e-2873
ectoderm-derived structure5.20e-2895
ectoderm5.20e-2895
presumptive ectoderm5.20e-2895
ecto-epithelium2.59e-2573
brain7.84e-2447
future brain7.84e-2447
structure with developmental contribution from neural crest5.91e-2392
pre-chordal neural plate9.09e-2349
regional part of brain1.25e-2246
gray matter7.12e-2234
anterior neural tube1.22e-1940
regional part of forebrain1.25e-1839
forebrain1.25e-1839
future forebrain1.25e-1839
brain grey matter3.08e-1629
regional part of telencephalon3.08e-1629
telencephalon3.08e-1629
occipital lobe8.00e-1610
visual cortex8.00e-1610
neocortex8.00e-1610
tube1.18e-11114
posterior neural tube1.76e-1012
chordal neural plate1.76e-1012
anatomical conduit4.08e-10122
regional part of cerebral cortex9.49e-1017
basal ganglion1.20e-098
nuclear complex of neuraxis1.20e-098
aggregate regional part of brain1.20e-098
collection of basal ganglia1.20e-098
cerebral subcortex1.20e-098
cerebral cortex8.09e-0921
cerebral hemisphere8.09e-0921
pallium8.09e-0921
spinal cord1.94e-086
dorsal region element1.94e-086
dorsum1.94e-086
regional part of spinal cord2.08e-075
gray matter of spinal cord2.08e-075
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