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FFCP PHASE1:Mm9::chr9:29770677..29770688,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=235106
|EntrezGene=235106
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=15bp_to_ENSMUST00000146651_5end
|association_with_transcript=15bp_to_ENSMUST00000146651_5end
|cluster_id=chr9:29770677..29770688,-
|description=CAGE_peak_4_at_Ntm_5end
|description=CAGE_peak_4_at_Ntm_5end
|id=chr9:29770677..29770688,-
|id=chr9:29770677..29770688,-
|ontology_enrichment_celltype=CL:0000117!1.88e-15!23;CL:0000337!1.88e-15!23;CL:0000540!3.75e-10!33;CL:0000047!3.75e-10!33;CL:0000031!3.75e-10!33;CL:0000404!3.75e-10!33;CL:0000221!1.49e-07!44;CL:0000133!1.49e-07!44;CL:0002319!1.81e-07!43;CL:0000393!3.84e-07!39;CL:0000211!3.84e-07!39
|ontology_enrichment_celltype=CL:0000117!1.88e-15!23;CL:0000337!1.88e-15!23;CL:0000540!3.75e-10!33;CL:0000047!3.75e-10!33;CL:0000031!3.75e-10!33;CL:0000404!3.75e-10!33;CL:0000221!1.49e-07!44;CL:0000133!1.49e-07!44;CL:0002319!1.81e-07!43;CL:0000393!3.84e-07!39;CL:0000211!3.84e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.58e-23,23;CL:0000337,4.58e-23,23;CL:0000540,4.32e-14,33;CL:0000047,4.32e-14,33;CL:0000031,4.32e-14,33;CL:0000404,4.32e-14,33;CL:0000393,5.73e-11,39;CL:0000211,5.73e-11,39;CL:0002319,2.16e-09,43;CL:0000221,4.80e-09,44;CL:0000133,4.80e-09,44;CL:0002609,5.73e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.06e-22!52;UBERON:0005068!1.06e-22!52;UBERON:0006241!1.06e-22!52;UBERON:0007135!1.06e-22!52;UBERON:0002020!2.39e-22!34;UBERON:0001017!3.82e-22!73;UBERON:0005743!3.82e-22!73;UBERON:0000033!2.87e-21!63;UBERON:0000955!3.34e-21!50;UBERON:0006238!3.34e-21!50;UBERON:0000073!6.32e-21!75;UBERON:0001016!6.32e-21!75;UBERON:0002346!1.44e-20!71;UBERON:0003075!1.44e-20!71;UBERON:0007284!1.44e-20!71;UBERON:0002616!1.86e-20!49;UBERON:0002791!7.25e-19!29;UBERON:0003528!7.25e-19!29;UBERON:0001893!7.25e-19!29;UBERON:0004121!8.21e-18!102;UBERON:0000924!8.21e-18!102;UBERON:0006601!8.21e-18!102;UBERON:0003056!4.44e-17!49;UBERON:0003080!7.15e-16!40;UBERON:0002780!3.89e-15!39;UBERON:0001890!3.89e-15!39;UBERON:0006240!3.89e-15!39;UBERON:0000956!2.76e-13!21;UBERON:0001869!2.76e-13!21;UBERON:0000203!2.76e-13!21;UBERON:0007811!9.74e-11!86;UBERON:0002619!1.12e-10!17;UBERON:0002021!4.25e-10!10;UBERON:0000411!4.25e-10!10;UBERON:0001950!4.25e-10!10;UBERON:0000153!1.11e-09!94;UBERON:0000025!1.24e-07!114;UBERON:0003076!1.40e-07!12;UBERON:0003057!1.40e-07!12;UBERON:0002420!8.38e-07!8;UBERON:0007245!8.38e-07!8;UBERON:0010009!8.38e-07!8;UBERON:0010011!8.38e-07!8;UBERON:0000454!8.38e-07!8
|ontology_enrichment_uberon=UBERON:0001049!1.06e-22!52;UBERON:0005068!1.06e-22!52;UBERON:0006241!1.06e-22!52;UBERON:0007135!1.06e-22!52;UBERON:0002020!2.39e-22!34;UBERON:0001017!3.82e-22!73;UBERON:0005743!3.82e-22!73;UBERON:0000033!2.87e-21!63;UBERON:0000955!3.34e-21!50;UBERON:0006238!3.34e-21!50;UBERON:0000073!6.32e-21!75;UBERON:0001016!6.32e-21!75;UBERON:0002346!1.44e-20!71;UBERON:0003075!1.44e-20!71;UBERON:0007284!1.44e-20!71;UBERON:0002616!1.86e-20!49;UBERON:0002791!7.25e-19!29;UBERON:0003528!7.25e-19!29;UBERON:0001893!7.25e-19!29;UBERON:0004121!8.21e-18!102;UBERON:0000924!8.21e-18!102;UBERON:0006601!8.21e-18!102;UBERON:0003056!4.44e-17!49;UBERON:0003080!7.15e-16!40;UBERON:0002780!3.89e-15!39;UBERON:0001890!3.89e-15!39;UBERON:0006240!3.89e-15!39;UBERON:0000956!2.76e-13!21;UBERON:0001869!2.76e-13!21;UBERON:0000203!2.76e-13!21;UBERON:0007811!9.74e-11!86;UBERON:0002619!1.12e-10!17;UBERON:0002021!4.25e-10!10;UBERON:0000411!4.25e-10!10;UBERON:0001950!4.25e-10!10;UBERON:0000153!1.11e-09!94;UBERON:0000025!1.24e-07!114;UBERON:0003076!1.40e-07!12;UBERON:0003057!1.40e-07!12;UBERON:0002420!8.38e-07!8;UBERON:0007245!8.38e-07!8;UBERON:0010009!8.38e-07!8;UBERON:0010011!8.38e-07!8;UBERON:0000454!8.38e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-39,54;UBERON:0002020,2.27e-37,34;UBERON:0001049,5.30e-37,52;UBERON:0005068,5.30e-37,52;UBERON:0006241,5.30e-37,52;UBERON:0007135,5.30e-37,52;UBERON:0001017,2.44e-32,73;UBERON:0002346,3.62e-32,64;UBERON:0003075,3.62e-32,64;UBERON:0007284,3.62e-32,64;UBERON:0003528,1.66e-31,29;UBERON:0002791,1.66e-31,29;UBERON:0001893,1.66e-31,29;UBERON:0001016,4.17e-31,75;UBERON:0000955,4.86e-31,47;UBERON:0006238,4.86e-31,47;UBERON:0002616,8.10e-30,46;UBERON:0010371,1.37e-26,73;UBERON:0003080,1.83e-26,40;UBERON:0002780,3.24e-25,39;UBERON:0001890,3.24e-25,39;UBERON:0006240,3.24e-25,39;UBERON:0004121,4.90e-25,95;UBERON:0000924,4.90e-25,95;UBERON:0006601,4.90e-25,95;UBERON:0003056,4.65e-24,49;UBERON:0000956,4.13e-22,21;UBERON:0001869,4.13e-22,21;UBERON:0000203,4.13e-22,21;UBERON:0010314,1.91e-18,92;UBERON:0002619,1.01e-17,17;UBERON:0002021,8.10e-16,10;UBERON:0000411,8.10e-16,10;UBERON:0001950,8.10e-16,10;UBERON:0000025,8.94e-12,114;UBERON:0003076,1.33e-10,12;UBERON:0003057,1.33e-10,12;UBERON:0002420,2.50e-10,8;UBERON:0007245,2.50e-10,8;UBERON:0010009,2.50e-10,8;UBERON:0010011,2.50e-10,8;UBERON:0000454,2.50e-10,8;UBERON:0004111,3.10e-10,122;UBERON:0002240,3.71e-08,6;UBERON:0005174,3.71e-08,6;UBERON:0001137,3.71e-08,6;UBERON:0000369,3.32e-07,5;UBERON:0002435,3.32e-07,5;UBERON:0000204,3.32e-07,5;UBERON:0010082,3.32e-07,5;UBERON:0001948,7.97e-07,5;UBERON:0002315,7.97e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,2.42779753031517,7.93486468908049,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,2.38486108309499,2.70011876663381,5.04779907243317,6.85562362569129,4.63823935998388,1.83736198822431,1.34183659425531,4.5960939330501,4.40463523997555,7.78892762319645,6.60508093001847,7.91317726381163,8.14240028061446,9.89735404057844,6.42120897703176,5.6276261003168,6.41752640662602,6.18720029494702,9.96601765593721,3.72798891650601,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,11.7112318804619,12.5668024088073,0,0,0,0,10.1857634795279,9.15001205637253,4.90051973240171,17.3824320192276,19.9458056717658,9.3504620051802,11.6813709408785,0,0.124406970610093,0,0.841767423545896,0,0,0.360124259610698,0.452114453507145,1.42876648217788,1.2811372028485,0.655912071918102,1.03481348295606,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0.134206418760372,11.7762371195911,6.68879980465349,0,0,0.639864751605702,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0,1.26289438973556,0.717589654087649,1.4473305640901,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,10.1146871692309,10.7834751664827,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,8.35435422696698,0.283880170416537,0.178065603667255,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,12.7943458387252,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.258319646955462,0,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.73260649706906,0,0,22.0253218620656,31.302116082488,32.0821487526062,35.9173151098307,18.4972280338073,15.107877947794,18.2256075062588,14.8605997063993,12.6879874515577,13.4617681055473,0,0,0.512200817262403,0.729320151204882,0.628839487883947,0.367687016900028,1.33348036680969,0.824140228955577,2.56735367673452,0.252697211763798,1.52087579934144,0.565879024158229,1.31098110457835,1.15245274328765,1.20614484806788,0.952587382566147,0.811190281613988,1.15745532278223,0.824171801606613,1.17759136107518,0.685738504770831,1.4198064492747,0.715308569841963,1.45346416632329,0.941093804153306,1.26921911837515,1.82927972872773,1.8414879800649,1.49384525230448,1.68342681497322,0.949080144993393,0.788035859004508,1.63692417267876,1.54936841185966,0.964533054905707,0.499621155875892,0.701794825336225,1.07435527024149,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,2.42779753031517,7.93486468908049,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,2.38486108309499,2.70011876663381,5.04779907243317,6.85562362569129,4.63823935998388,1.83736198822431,1.34183659425531,4.5960939330501,4.40463523997555,7.78892762319645,6.60508093001847,7.91317726381163,8.14240028061446,9.89735404057844,6.42120897703176,5.6276261003168,6.41752640662602,6.18720029494702,9.96601765593721,3.72798891650601,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,11.7112318804619,12.5668024088073,0,0,0,0,10.1857634795279,9.15001205637253,4.90051973240171,17.3824320192276,19.9458056717658,9.3504620051802,11.6813709408785,0,0.124406970610093,0,0.841767423545896,0,0,0.360124259610698,0.452114453507145,1.42876648217788,1.2811372028485,0.655912071918102,1.03481348295606,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0.134206418760372,11.7762371195911,6.68879980465349,0,0,0.639864751605702,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0,1.26289438973556,0.717589654087649,1.4473305640901,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,10.1146871692309,10.7834751664827,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,8.35435422696698,0.283880170416537,0.178065603667255,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,12.7943458387252,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.258319646955462,0,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.73260649706906,0,0,22.0253218620656,31.302116082488,32.0821487526062,35.9173151098307,18.4972280338073,15.107877947794,18.2256075062588,14.8605997063993,12.6879874515577,13.4617681055473,0,0,0.512200817262403,0.729320151204882,0.628839487883947,0.367687016900028,1.33348036680969,0.824140228955577,2.56735367673452,0.252697211763798,1.52087579934144,0.565879024158229,1.31098110457835,1.15245274328765,1.20614484806788,0.952587382566147,0.811190281613988,1.15745532278223,0.824171801606613,1.17759136107518,0.685738504770831,1.4198064492747,0.715308569841963,1.45346416632329,0.941093804153306,1.26921911837515,1.82927972872773,1.8414879800649,1.49384525230448,1.68342681497322,0.949080144993393,0.788035859004508,1.63692417267876,1.54936841185966,0.964533054905707,0.499621155875892,0.701794825336225,1.07435527024149,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p4@Ntm
|short_description=p4@Ntm
}}
}}

Latest revision as of 12:47, 26 September 2015

Short description:p4@Ntm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ntm_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 15bp_to_ENSMUST00000146651_5end
EntrezGene:Ntm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ntm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I212.57
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F219.95
diencephalon, adult.CNhs10482.20-12F29.35
diencephalon, neonate N30.CNhs11201.1388-42B211.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E811.78
hippocampus, neonate N00.CNhs11228.627-43G16.69
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A310.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.84e-3954
gray matter2.27e-3734
neural tube5.30e-3752
neural rod5.30e-3752
future spinal cord5.30e-3752
neural keel5.30e-3752
central nervous system2.44e-3273
neurectoderm3.62e-3264
neural plate3.62e-3264
presumptive neural plate3.62e-3264
brain grey matter1.66e-3129
regional part of telencephalon1.66e-3129
telencephalon1.66e-3129
nervous system4.17e-3175
brain4.86e-3147
future brain4.86e-3147
regional part of brain8.10e-3046
ecto-epithelium1.37e-2673
anterior neural tube1.83e-2640
regional part of forebrain3.24e-2539
forebrain3.24e-2539
future forebrain3.24e-2539
ectoderm-derived structure4.90e-2595
ectoderm4.90e-2595
presumptive ectoderm4.90e-2595
pre-chordal neural plate4.65e-2449
cerebral cortex4.13e-2221
cerebral hemisphere4.13e-2221
pallium4.13e-2221
structure with developmental contribution from neural crest1.91e-1892
regional part of cerebral cortex1.01e-1717
occipital lobe8.10e-1610
visual cortex8.10e-1610
neocortex8.10e-1610
tube8.94e-12114
posterior neural tube1.33e-1012
chordal neural plate1.33e-1012
basal ganglion2.50e-108
nuclear complex of neuraxis2.50e-108
aggregate regional part of brain2.50e-108
collection of basal ganglia2.50e-108
cerebral subcortex2.50e-108
anatomical conduit3.10e-10122
spinal cord3.71e-086
dorsal region element3.71e-086
dorsum3.71e-086
corpus striatum3.32e-075
striatum3.32e-075
ventral part of telencephalon3.32e-075
future corpus striatum3.32e-075
regional part of spinal cord7.97e-075
gray matter of spinal cord7.97e-075
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