FFCP PHASE1:Mm9::chr4:137806340..137806376,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16559|HGNC=|MCL_coexpression_id=2400|UniProt=A2AM74,O35057|association_with_transcript=0bp_to_ENSMUST00000105818,ENSMUST00000105819_5end|description=CAGE_peak_1_at_Kif17_5end|id=chr4:137806340..137806376,+|ontology_enrichment_celltype=CL:0000117!2.11e-11!23;CL:0000337!2.11e-11!23;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-14,23;CL:0000337,4.77e-14,23;CL:0000540,4.17e-08,33;CL:0000047,4.17e-08,33;CL:0000031,4.17e-08,33;CL:0000404,4.17e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.63e-17!52;UBERON:0005068!1.63e-17!52;UBERON:0006241!1.63e-17!52;UBERON:0007135!1.63e-17!52;UBERON:0000073!8.82e-17!75;UBERON:0001016!8.82e-17!75;UBERON:0000955!1.13e-16!50;UBERON:0006238!1.13e-16!50;UBERON:0001017!1.56e-16!73;UBERON:0005743!1.56e-16!73;UBERON:0002616!3.78e-16!49;UBERON:0002346!8.83e-16!71;UBERON:0003075!8.83e-16!71;UBERON:0007284!8.83e-16!71;UBERON:0002020!3.10e-15!34;UBERON:0000033!1.70e-14!63;UBERON:0003080!1.24e-13!40;UBERON:0004121!1.59e-13!102;UBERON:0000924!1.59e-13!102;UBERON:0006601!1.59e-13!102;UBERON:0003056!3.92e-13!49;UBERON:0002780!5.79e-13!39;UBERON:0001890!5.79e-13!39;UBERON:0006240!5.79e-13!39;UBERON:0002791!1.25e-12!29;UBERON:0003528!1.25e-12!29;UBERON:0001893!1.25e-12!29;UBERON:0007811!1.51e-09!86;UBERON:0000956!3.76e-08!21;UBERON:0001869!3.76e-08!21;UBERON:0000203!3.76e-08!21;UBERON:0002021!2.15e-07!10;UBERON:0000411!2.15e-07!10;UBERON:0001950!2.15e-07!10;UBERON:0002619!4.27e-07!17;UBERON:0000153!4.74e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.38e-26,54;UBERON:0001049,3.75e-24,52;UBERON:0005068,3.75e-24,52;UBERON:0006241,3.75e-24,52;UBERON:0007135,3.75e-24,52;UBERON:0001017,2.93e-22,73;UBERON:0002020,4.26e-22,34;UBERON:0001016,2.74e-21,75;UBERON:0000955,1.35e-19,47;UBERON:0006238,1.35e-19,47;UBERON:0002346,1.43e-19,64;UBERON:0003075,1.43e-19,64;UBERON:0007284,1.43e-19,64;UBERON:0002616,9.31e-19,46;UBERON:0003528,1.26e-17,29;UBERON:0002791,1.26e-17,29;UBERON:0001893,1.26e-17,29;UBERON:0003080,1.96e-16,40;UBERON:0010371,1.24e-15,73;UBERON:0004121,1.29e-15,95;UBERON:0000924,1.29e-15,95;UBERON:0006601,1.29e-15,95;UBERON:0002780,2.21e-15,39;UBERON:0001890,2.21e-15,39;UBERON:0006240,2.21e-15,39;UBERON:0003056,7.36e-14,49;UBERON:0002021,7.10e-12,10;UBERON:0000411,7.10e-12,10;UBERON:0001950,7.10e-12,10;UBERON:0000956,3.86e-10,21;UBERON:0001869,3.86e-10,21;UBERON:0000203,3.86e-10,21;UBERON:0010314,5.44e-10,92;UBERON:0002619,5.60e-10,17;UBERON:0002420,2.13e-09,8;UBERON:0007245,2.13e-09,8;UBERON:0010009,2.13e-09,8;UBERON:0010011,2.13e-09,8;UBERON:0000454,2.13e-09,8;UBERON:0003076,1.73e-08,12;UBERON:0003057,1.73e-08,12;UBERON:0002240,6.57e-07,6;UBERON:0005174,6.57e-07,6;UBERON:0001137,6.57e-07,6|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0.422366166455,0.70219357896598,1.02730780935303,1.35612670292072,0,0.174840804837995,0,0,0,0,0,0,3.06155844543851,5.46100231604869,6.00759515019551,0,0,0.57423196411502,0,0.215471232685889,0,0,0,1.90509202037889,1.23012957516914,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0,0,0.573066879877513,0,2.83243045203437,4.23192783417626,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.405017814995072,1.26194976810829,3.99911378165325,5.74258206474195,0.979926393719632,0.958454710182364,1.83843757322004,11.0115880999389,9.3211756802187,9.83081812839958,3.56092976871523,4.39140689291566,3.64639359389732,8.65467296904281,11.2552522006336,11.0014738399303,7.36571463684169,3.84403538157578,4.10078780815661,0.757261933331841,0.377857800533928,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,3.89683873820185,2.53359865475099,2.02209778005913,0.34255163915718,0.258937883647172,0.742210695324124,0.520455980298408,0.304465478312141,0,0.60289056221049,0.587943535678524,0.628332956648377,0.988779870937496,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,4.09893115816166,6.28340120440365,0.255457055208591,8.8663192134381,8.99854096490112,7.11593271609162,13.481157546434,32.0250421973039,6.28271760564322,20.8589184230732,14.8314965251592,11.8439185398949,16.8730913590468,0.305518091550949,1.11966273549084,1.76905930903572,1.47309299120532,0,0,0.180062129805349,0.60281927134286,0.612328492361951,0.512454881139399,0.843315521037559,1.55222022443409,0,0,0,0,0,0,0,0.199034266818493,5.61770549850588,3.86021860672073,4.54661599032948,0,0.234526059981096,0.36012412292203,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,14.5100064509248,1.3377599609307,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0.796565093017469,0.569003702859245,0,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0,0,0,0,0,0.786235980452812,0,0.202860121388503,0.72353147925725,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,8.08760637486202,0,0,0,0,0.430846795465598,0,0.222798674082394,0.566153061577665,0,0.584511715822624,0.395287777946524,4.4984984299053,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0,0.532020700926821,0.535106452806212,0.493647061806363,0.913394847343798,2.81606049676452,0.63549621259146,0,0,0,0,0.119372344003136,0.164140899745061,0,9.82754100655701,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0.686334519619568,12.2384469595576,14.1350966846895,11.746997773376,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0,0,0.56369293868419,0.149516546043979,0.496375471371293,1.16670713006429,1.29159823477731,0.844780627453891,1.05621514781179,1.3020438484395,1.46803082195995,0.724752362478018,0.576060012515731,0,0,0.308132871494482,0.51968329191118,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.221985953374065,0.538283139656854,0.839423081820392,0,1.68914227906064,0.36630324853453,0.428736758158132,0,5.0827665835536,5.52390283808612,5.15605962095457,7.56154002312225,6.85082519770642,11.3309084608455,6.75022500231806,9.45674526770863,16.3131267234314,12.4262474820437,0.207574695168353,2.39414924040619,0.853668028770671,0.972426868273176,0.419226325255965,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.468207537349412,0.448176066834085,0.689225627467359,1.90517476513229,0.695305955669133,0.77163688185482,0,1.32479028120958,0.342869252385415,0.70990322463735,0.953744759789284,0.436039249896986,1.03520318456864,0.338458431566706,0.182927972872773,0.789209134313529,0.679020569229309,0.561142271657738,0.830445126869219,0.689531376628944,1.22769312950907,0.929621047115796,0.771626443924566,1.24905288968973,0.233931608445408,1.07435527024149,0.382576664137687,0,0.927471342481686|short_description=p1@Kif17}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16559 | |||
|HGNC= | |||
|MCL_coexpression_id=2400 | |||
|TSSclassifier=NA | |||
|UniProt=A2AM74,O35057 | |||
|association_with_transcript=0bp_to_ENSMUST00000105818,ENSMUST00000105819_5end | |||
|cluster_id=chr4:137806340..137806376,+ | |||
|description=CAGE_peak_1_at_Kif17_5end | |||
|id=chr4:137806340..137806376,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.11e-11!23;CL:0000337!2.11e-11!23;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-14,23;CL:0000337,4.77e-14,23;CL:0000540,4.17e-08,33;CL:0000047,4.17e-08,33;CL:0000031,4.17e-08,33;CL:0000404,4.17e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.63e-17!52;UBERON:0005068!1.63e-17!52;UBERON:0006241!1.63e-17!52;UBERON:0007135!1.63e-17!52;UBERON:0000073!8.82e-17!75;UBERON:0001016!8.82e-17!75;UBERON:0000955!1.13e-16!50;UBERON:0006238!1.13e-16!50;UBERON:0001017!1.56e-16!73;UBERON:0005743!1.56e-16!73;UBERON:0002616!3.78e-16!49;UBERON:0002346!8.83e-16!71;UBERON:0003075!8.83e-16!71;UBERON:0007284!8.83e-16!71;UBERON:0002020!3.10e-15!34;UBERON:0000033!1.70e-14!63;UBERON:0003080!1.24e-13!40;UBERON:0004121!1.59e-13!102;UBERON:0000924!1.59e-13!102;UBERON:0006601!1.59e-13!102;UBERON:0003056!3.92e-13!49;UBERON:0002780!5.79e-13!39;UBERON:0001890!5.79e-13!39;UBERON:0006240!5.79e-13!39;UBERON:0002791!1.25e-12!29;UBERON:0003528!1.25e-12!29;UBERON:0001893!1.25e-12!29;UBERON:0007811!1.51e-09!86;UBERON:0000956!3.76e-08!21;UBERON:0001869!3.76e-08!21;UBERON:0000203!3.76e-08!21;UBERON:0002021!2.15e-07!10;UBERON:0000411!2.15e-07!10;UBERON:0001950!2.15e-07!10;UBERON:0002619!4.27e-07!17;UBERON:0000153!4.74e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.38e-26,54;UBERON:0001049,3.75e-24,52;UBERON:0005068,3.75e-24,52;UBERON:0006241,3.75e-24,52;UBERON:0007135,3.75e-24,52;UBERON:0001017,2.93e-22,73;UBERON:0002020,4.26e-22,34;UBERON:0001016,2.74e-21,75;UBERON:0000955,1.35e-19,47;UBERON:0006238,1.35e-19,47;UBERON:0002346,1.43e-19,64;UBERON:0003075,1.43e-19,64;UBERON:0007284,1.43e-19,64;UBERON:0002616,9.31e-19,46;UBERON:0003528,1.26e-17,29;UBERON:0002791,1.26e-17,29;UBERON:0001893,1.26e-17,29;UBERON:0003080,1.96e-16,40;UBERON:0010371,1.24e-15,73;UBERON:0004121,1.29e-15,95;UBERON:0000924,1.29e-15,95;UBERON:0006601,1.29e-15,95;UBERON:0002780,2.21e-15,39;UBERON:0001890,2.21e-15,39;UBERON:0006240,2.21e-15,39;UBERON:0003056,7.36e-14,49;UBERON:0002021,7.10e-12,10;UBERON:0000411,7.10e-12,10;UBERON:0001950,7.10e-12,10;UBERON:0000956,3.86e-10,21;UBERON:0001869,3.86e-10,21;UBERON:0000203,3.86e-10,21;UBERON:0010314,5.44e-10,92;UBERON:0002619,5.60e-10,17;UBERON:0002420,2.13e-09,8;UBERON:0007245,2.13e-09,8;UBERON:0010009,2.13e-09,8;UBERON:0010011,2.13e-09,8;UBERON:0000454,2.13e-09,8;UBERON:0003076,1.73e-08,12;UBERON:0003057,1.73e-08,12;UBERON:0002240,6.57e-07,6;UBERON:0005174,6.57e-07,6;UBERON:0001137,6.57e-07,6 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0.422366166455,0.70219357896598,1.02730780935303,1.35612670292072,0,0.174840804837995,0,0,0,0,0,0,3.06155844543851,5.46100231604869,6.00759515019551,0,0,0.57423196411502,0,0.215471232685889,0,0,0,1.90509202037889,1.23012957516914,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0.503347818173209,0,0,0,0.573066879877513,0,2.83243045203437,4.23192783417626,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.725827286159344,0.405017814995072,1.26194976810829,3.99911378165325,5.74258206474195,0.979926393719632,0.958454710182364,1.83843757322004,11.0115880999389,9.3211756802187,9.83081812839958,3.56092976871523,4.39140689291566,3.64639359389732,8.65467296904281,11.2552522006336,11.0014738399303,7.36571463684169,3.84403538157578,4.10078780815661,0.757261933331841,0.377857800533928,0,0,0,0,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,3.89683873820185,2.53359865475099,2.02209778005913,0.34255163915718,0.258937883647172,0.742210695324124,0.520455980298408,0.304465478312141,0,0.60289056221049,0.587943535678524,0.628332956648377,0.988779870937496,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,4.09893115816166,6.28340120440365,0.255457055208591,8.8663192134381,8.99854096490112,7.11593271609162,13.481157546434,32.0250421973039,6.28271760564322,20.8589184230732,14.8314965251592,11.8439185398949,16.8730913590468,0.305518091550949,1.11966273549084,1.76905930903572,1.47309299120532,0,0,0.180062129805349,0.60281927134286,0.612328492361951,0.512454881139399,0.843315521037559,1.55222022443409,0,0,0,0,0,0,0,0.199034266818493,5.61770549850588,3.86021860672073,4.54661599032948,0,0.234526059981096,0.36012412292203,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,14.5100064509248,1.3377599609307,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0.796565093017469,0.569003702859245,0,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0,0,0,0,0,0.786235980452812,0,0.202860121388503,0.72353147925725,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,8.08760637486202,0,0,0,0,0.430846795465598,0,0.222798674082394,0.566153061577665,0,0.584511715822624,0.395287777946524,4.4984984299053,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,1.209294227859,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0,0.532020700926821,0.535106452806212,0.493647061806363,0.913394847343798,2.81606049676452,0.63549621259146,0,0,0,0,0.119372344003136,0.164140899745061,0,9.82754100655701,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0.686334519619568,12.2384469595576,14.1350966846895,11.746997773376,0,0.316335993581135,0.203319467126849,0,0,0,0,0,0,0,0,0.56369293868419,0.149516546043979,0.496375471371293,1.16670713006429,1.29159823477731,0.844780627453891,1.05621514781179,1.3020438484395,1.46803082195995,0.724752362478018,0.576060012515731,0,0,0.308132871494482,0.51968329191118,0,0.198681354781265,0.120195449519969,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.221985953374065,0.538283139656854,0.839423081820392,0,1.68914227906064,0.36630324853453,0.428736758158132,0,5.0827665835536,5.52390283808612,5.15605962095457,7.56154002312225,6.85082519770642,11.3309084608455,6.75022500231806,9.45674526770863,16.3131267234314,12.4262474820437,0.207574695168353,2.39414924040619,0.853668028770671,0.972426868273176,0.419226325255965,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.943131706930381,0.468207537349412,0.448176066834085,0.689225627467359,1.90517476513229,0.695305955669133,0.77163688185482,0,1.32479028120958,0.342869252385415,0.70990322463735,0.953744759789284,0.436039249896986,1.03520318456864,0.338458431566706,0.182927972872773,0.789209134313529,0.679020569229309,0.561142271657738,0.830445126869219,0.689531376628944,1.22769312950907,0.929621047115796,0.771626443924566,1.24905288968973,0.233931608445408,1.07435527024149,0.382576664137687,0,0.927471342481686 | |||
|short_description=p1@Kif17 | |||
}} |
Latest revision as of 14:08, 26 September 2015
Short description: | p1@Kif17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kif17_5end |
Coexpression cluster: | MCL_coexpression_mm9:2400 |
Association with transcript: | 0bp_to_ENSMUST00000105818, ENSMUST00000105819_5end |
EntrezGene: | Kif17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.77e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.77e-14 | 23 |
neuron | 4.17e-08 | 33 |
neuronal stem cell | 4.17e-08 | 33 |
neuroblast | 4.17e-08 | 33 |
electrically signaling cell | 4.17e-08 | 33 |