FFCP PHASE1:Mm9::chr2:32986085..32986140,-: Difference between revisions
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{{FFCP|EntrezGene=99326|HGNC=|MCL_coexpression_id=797|UniProt=A2AUQ6|association_with_transcript=0bp_to_ENSMUST00000124000_5end|description=CAGE_peak_1_at_Garnl3_5end|id=chr2:32986085..32986140,-|ontology_enrichment_celltype=CL:0000393!1.08e-12!39;CL:0000211!1.08e-12!39;CL:0000221!5.66e-12!44;CL:0000133!5.66e-12!44;CL:0000055!6.53e-12!50;CL:0000540!6.75e-12!33;CL:0000047!6.75e-12!33;CL:0000031!6.75e-12!33;CL:0000404!6.75e-12!33;CL:0002319!6.86e-12!43;CL:0000117!1.29e-07!23;CL:0000337!1.29e-07!23|ontology_enrichment_celltype_v019_2=CL:0000393,6.74e-13,39;CL:0000211,6.74e-13,39;CL:0000221,3.64e-12,44;CL:0000133,3.64e-12,44;CL:0000540,4.36e-12,33;CL:0000047,4.36e-12,33;CL:0000031,4.36e-12,33;CL:0000404,4.36e-12,33;CL:0002319,4.43e-12,43;CL:0000117,9.99e-08,23;CL:0000337,9.99e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.32e-22!75;UBERON:0001016!2.32e-22!75;UBERON:0001017!3.68e-22!73;UBERON:0005743!3.68e-22!73;UBERON:0004121!9.85e-18!102;UBERON:0000924!9.85e-18!102;UBERON:0006601!9.85e-18!102;UBERON:0002346!1.03e-14!71;UBERON:0003075!1.03e-14!71;UBERON:0007284!1.03e-14!71;UBERON:0001049!1.20e-14!52;UBERON:0005068!1.20e-14!52;UBERON:0006241!1.20e-14!52;UBERON:0007135!1.20e-14!52;UBERON:0000955!1.82e-13!50;UBERON:0006238!1.82e-13!50;UBERON:0002020!1.89e-13!34;UBERON:0002616!3.34e-13!49;UBERON:0000033!1.92e-11!63;UBERON:0002791!7.44e-11!29;UBERON:0003528!7.44e-11!29;UBERON:0001893!7.44e-11!29;UBERON:0003080!2.30e-10!40;UBERON:0002780!4.92e-10!39;UBERON:0001890!4.92e-10!39;UBERON:0006240!4.92e-10!39;UBERON:0003056!1.68e-09!49;UBERON:0000025!4.02e-08!114;UBERON:0002619!7.49e-08!17;UBERON:0002021!8.01e-08!10;UBERON:0000411!8.01e-08!10;UBERON:0001950!8.01e-08!10;UBERON:0000956!8.26e-08!21;UBERON:0001869!8.26e-08!21;UBERON:0000203!8.26e-08!21;UBERON:0004111!3.05e-07!122;UBERON:0000468!9.05e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.76e-23,75;UBERON:0001017,1.56e-22,73;UBERON:0004121,5.81e-18,95;UBERON:0000924,5.81e-18,95;UBERON:0006601,5.81e-18,95;UBERON:0000073,4.72e-16,54;UBERON:0010314,2.26e-15,92;UBERON:0002346,4.24e-15,64;UBERON:0003075,4.24e-15,64;UBERON:0007284,4.24e-15,64;UBERON:0001049,7.03e-15,52;UBERON:0005068,7.03e-15,52;UBERON:0006241,7.03e-15,52;UBERON:0007135,7.03e-15,52;UBERON:0002020,1.14e-13,34;UBERON:0010371,2.80e-13,73;UBERON:0000955,2.32e-12,47;UBERON:0006238,2.32e-12,47;UBERON:0002616,4.24e-12,46;UBERON:0003528,5.02e-11,29;UBERON:0002791,5.02e-11,29;UBERON:0001893,5.02e-11,29;UBERON:0003080,1.60e-10,40;UBERON:0002780,3.48e-10,39;UBERON:0001890,3.48e-10,39;UBERON:0006240,3.48e-10,39;UBERON:0003056,1.21e-09,49;UBERON:0002619,5.73e-08,17;UBERON:0002021,6.14e-08,10;UBERON:0000411,6.14e-08,10;UBERON:0001950,6.14e-08,10;UBERON:0000956,6.33e-08,21;UBERON:0001869,6.33e-08,21;UBERON:0000203,6.33e-08,21;UBERON:0000025,7.06e-08,114;UBERON:0004111,5.27e-07,122;UBERON:0000922,6.14e-07,320|phase1_expression=3.68342348341026,0.697950815278722,1.36499771816861,0.30246421130683,0,0.839396359559449,0.233612640595526,0,0.281577444303333,0.234064526321993,0,0.159544317990673,0,0,1.33243904726265,0.202475267389826,0,0.473193248037357,0.548457734422955,1.27316895539409,6.20816018102809,0.893618560807968,0.522399578277871,1.27993938234725,1.60586496747019,1.14846392823004,0.430761996159075,0.861884930743556,0,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,3.02152363141385,2.33166941804883,4.03802854755699,1.56478268869608,7.19483016055474,4.83309602015838,7.19390626574849,3.21968769738334,12.9377307928474,0,0,0.336093799142464,10.5476368774738,10.8882707176728,13.9231464914909,7.68802551266472,10.0508286061686,6.33831403506179,7.45457970552091,5.33576877666684,0.449949858640699,0,0,2.69640099466564,2.30530983192933,3.94020526772215,2.8351247049655,3.99617426567626,12.5686433137674,12.3686382932904,3.79721477566358,1.72521847832825,4.5960939330501,12.1127469099328,6.38436690425939,8.29475279583715,11.2103344570665,9.24025200384338,6.25096044668112,7.53794097303729,7.87867654044352,10.5430790965999,14.4368006882097,10.9626194215309,7.64237727883732,3.71058347332602,5.13886608726142,2.02905142091174,0,0.679971333707751,0.539703191637817,0,0.448026887097336,1.12355536105401,5.45377032249785,3.37721805983729,2.82671659608272,4.3661460130771,7.69958864485907,20.3844191765317,35.5533351576666,3.030874574157,3.54703811665138,2.02209778005913,1.37020655662872,2.07150306917737,5.19547486726887,1.90833859442749,3.95805121805784,5.76538743140146,2.71300752994721,4.58595957829249,2.63899841792318,0.494389935468748,2.60278842455841,1.76922110389975,3.23533699894818,1.98757366614354,1.45462575940567,0,13.4679166625312,20.1068838540917,0.510914110417183,0.479260498023681,0,0.254140454146129,6.44099749440738,8.23501085073528,4.64921102817598,11.9938780932671,12.7857728665165,6.2336413367868,6.97637431191358,4.9901288286655,2.86136032403214,2.0217820674694,1.26265113531884,3.77349284591841,3.21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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=99326 | |||
|HGNC= | |||
|MCL_coexpression_id=797 | |||
|TSSclassifier=NA | |||
|UniProt=A2AUQ6 | |||
|association_with_transcript=0bp_to_ENSMUST00000124000_5end | |||
|cluster_id=chr2:32986085..32986140,- | |||
|description=CAGE_peak_1_at_Garnl3_5end | |||
|id=chr2:32986085..32986140,- | |||
|ontology_enrichment_celltype=CL:0000393!1.08e-12!39;CL:0000211!1.08e-12!39;CL:0000221!5.66e-12!44;CL:0000133!5.66e-12!44;CL:0000055!6.53e-12!50;CL:0000540!6.75e-12!33;CL:0000047!6.75e-12!33;CL:0000031!6.75e-12!33;CL:0000404!6.75e-12!33;CL:0002319!6.86e-12!43;CL:0000117!1.29e-07!23;CL:0000337!1.29e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,6.74e-13,39;CL:0000211,6.74e-13,39;CL:0000221,3.64e-12,44;CL:0000133,3.64e-12,44;CL:0000540,4.36e-12,33;CL:0000047,4.36e-12,33;CL:0000031,4.36e-12,33;CL:0000404,4.36e-12,33;CL:0002319,4.43e-12,43;CL:0000117,9.99e-08,23;CL:0000337,9.99e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.32e-22!75;UBERON:0001016!2.32e-22!75;UBERON:0001017!3.68e-22!73;UBERON:0005743!3.68e-22!73;UBERON:0004121!9.85e-18!102;UBERON:0000924!9.85e-18!102;UBERON:0006601!9.85e-18!102;UBERON:0002346!1.03e-14!71;UBERON:0003075!1.03e-14!71;UBERON:0007284!1.03e-14!71;UBERON:0001049!1.20e-14!52;UBERON:0005068!1.20e-14!52;UBERON:0006241!1.20e-14!52;UBERON:0007135!1.20e-14!52;UBERON:0000955!1.82e-13!50;UBERON:0006238!1.82e-13!50;UBERON:0002020!1.89e-13!34;UBERON:0002616!3.34e-13!49;UBERON:0000033!1.92e-11!63;UBERON:0002791!7.44e-11!29;UBERON:0003528!7.44e-11!29;UBERON:0001893!7.44e-11!29;UBERON:0003080!2.30e-10!40;UBERON:0002780!4.92e-10!39;UBERON:0001890!4.92e-10!39;UBERON:0006240!4.92e-10!39;UBERON:0003056!1.68e-09!49;UBERON:0000025!4.02e-08!114;UBERON:0002619!7.49e-08!17;UBERON:0002021!8.01e-08!10;UBERON:0000411!8.01e-08!10;UBERON:0001950!8.01e-08!10;UBERON:0000956!8.26e-08!21;UBERON:0001869!8.26e-08!21;UBERON:0000203!8.26e-08!21;UBERON:0004111!3.05e-07!122;UBERON:0000468!9.05e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.76e-23,75;UBERON:0001017,1.56e-22,73;UBERON:0004121,5.81e-18,95;UBERON:0000924,5.81e-18,95;UBERON:0006601,5.81e-18,95;UBERON:0000073,4.72e-16,54;UBERON:0010314,2.26e-15,92;UBERON:0002346,4.24e-15,64;UBERON:0003075,4.24e-15,64;UBERON:0007284,4.24e-15,64;UBERON:0001049,7.03e-15,52;UBERON:0005068,7.03e-15,52;UBERON:0006241,7.03e-15,52;UBERON:0007135,7.03e-15,52;UBERON:0002020,1.14e-13,34;UBERON:0010371,2.80e-13,73;UBERON:0000955,2.32e-12,47;UBERON:0006238,2.32e-12,47;UBERON:0002616,4.24e-12,46;UBERON:0003528,5.02e-11,29;UBERON:0002791,5.02e-11,29;UBERON:0001893,5.02e-11,29;UBERON:0003080,1.60e-10,40;UBERON:0002780,3.48e-10,39;UBERON:0001890,3.48e-10,39;UBERON:0006240,3.48e-10,39;UBERON:0003056,1.21e-09,49;UBERON:0002619,5.73e-08,17;UBERON:0002021,6.14e-08,10;UBERON:0000411,6.14e-08,10;UBERON:0001950,6.14e-08,10;UBERON:0000956,6.33e-08,21;UBERON:0001869,6.33e-08,21;UBERON:0000203,6.33e-08,21;UBERON:0000025,7.06e-08,114;UBERON:0004111,5.27e-07,122;UBERON:0000922,6.14e-07,320 | |||
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| |||
|short_description=p1@Garnl3 | |||
}} |
Latest revision as of 15:01, 26 September 2015
Short description: | p1@Garnl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Garnl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:797 |
Association with transcript: | 0bp_to_ENSMUST00000124000_5end |
EntrezGene: | Garnl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 6.74e-13 | 39 |
electrically active cell | 6.74e-13 | 39 |
ectodermal cell | 3.64e-12 | 44 |
neurectodermal cell | 3.64e-12 | 44 |
neuron | 4.36e-12 | 33 |
neuronal stem cell | 4.36e-12 | 33 |
neuroblast | 4.36e-12 | 33 |
electrically signaling cell | 4.36e-12 | 33 |
neural cell | 4.43e-12 | 43 |
CNS neuron (sensu Vertebrata) | 9.99e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.99e-08 | 23 |