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FFCP PHASE1:Mm9::chr2:32986085..32986140,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=99326
|EntrezGene=99326
|HGNC=
|HGNC=
|MCL_coexpression_id=797
|TSSclassifier=NA
|UniProt=A2AUQ6
|UniProt=A2AUQ6
|association_with_transcript=0bp_to_ENSMUST00000124000_5end
|association_with_transcript=0bp_to_ENSMUST00000124000_5end
|cluster_id=chr2:32986085..32986140,-
|description=CAGE_peak_1_at_Garnl3_5end
|description=CAGE_peak_1_at_Garnl3_5end
|id=chr2:32986085..32986140,-
|id=chr2:32986085..32986140,-
|ontology_enrichment_celltype=CL:0000393!1.08e-12!39;CL:0000211!1.08e-12!39;CL:0000221!5.66e-12!44;CL:0000133!5.66e-12!44;CL:0000055!6.53e-12!50;CL:0000540!6.75e-12!33;CL:0000047!6.75e-12!33;CL:0000031!6.75e-12!33;CL:0000404!6.75e-12!33;CL:0002319!6.86e-12!43;CL:0000117!1.29e-07!23;CL:0000337!1.29e-07!23
|ontology_enrichment_celltype=CL:0000393!1.08e-12!39;CL:0000211!1.08e-12!39;CL:0000221!5.66e-12!44;CL:0000133!5.66e-12!44;CL:0000055!6.53e-12!50;CL:0000540!6.75e-12!33;CL:0000047!6.75e-12!33;CL:0000031!6.75e-12!33;CL:0000404!6.75e-12!33;CL:0002319!6.86e-12!43;CL:0000117!1.29e-07!23;CL:0000337!1.29e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000393,6.74e-13,39;CL:0000211,6.74e-13,39;CL:0000221,3.64e-12,44;CL:0000133,3.64e-12,44;CL:0000540,4.36e-12,33;CL:0000047,4.36e-12,33;CL:0000031,4.36e-12,33;CL:0000404,4.36e-12,33;CL:0002319,4.43e-12,43;CL:0000117,9.99e-08,23;CL:0000337,9.99e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.32e-22!75;UBERON:0001016!2.32e-22!75;UBERON:0001017!3.68e-22!73;UBERON:0005743!3.68e-22!73;UBERON:0004121!9.85e-18!102;UBERON:0000924!9.85e-18!102;UBERON:0006601!9.85e-18!102;UBERON:0002346!1.03e-14!71;UBERON:0003075!1.03e-14!71;UBERON:0007284!1.03e-14!71;UBERON:0001049!1.20e-14!52;UBERON:0005068!1.20e-14!52;UBERON:0006241!1.20e-14!52;UBERON:0007135!1.20e-14!52;UBERON:0000955!1.82e-13!50;UBERON:0006238!1.82e-13!50;UBERON:0002020!1.89e-13!34;UBERON:0002616!3.34e-13!49;UBERON:0000033!1.92e-11!63;UBERON:0002791!7.44e-11!29;UBERON:0003528!7.44e-11!29;UBERON:0001893!7.44e-11!29;UBERON:0003080!2.30e-10!40;UBERON:0002780!4.92e-10!39;UBERON:0001890!4.92e-10!39;UBERON:0006240!4.92e-10!39;UBERON:0003056!1.68e-09!49;UBERON:0000025!4.02e-08!114;UBERON:0002619!7.49e-08!17;UBERON:0002021!8.01e-08!10;UBERON:0000411!8.01e-08!10;UBERON:0001950!8.01e-08!10;UBERON:0000956!8.26e-08!21;UBERON:0001869!8.26e-08!21;UBERON:0000203!8.26e-08!21;UBERON:0004111!3.05e-07!122;UBERON:0000468!9.05e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.76e-23,75;UBERON:0001017,1.56e-22,73;UBERON:0004121,5.81e-18,95;UBERON:0000924,5.81e-18,95;UBERON:0006601,5.81e-18,95;UBERON:0000073,4.72e-16,54;UBERON:0010314,2.26e-15,92;UBERON:0002346,4.24e-15,64;UBERON:0003075,4.24e-15,64;UBERON:0007284,4.24e-15,64;UBERON:0001049,7.03e-15,52;UBERON:0005068,7.03e-15,52;UBERON:0006241,7.03e-15,52;UBERON:0007135,7.03e-15,52;UBERON:0002020,1.14e-13,34;UBERON:0010371,2.80e-13,73;UBERON:0000955,2.32e-12,47;UBERON:0006238,2.32e-12,47;UBERON:0002616,4.24e-12,46;UBERON:0003528,5.02e-11,29;UBERON:0002791,5.02e-11,29;UBERON:0001893,5.02e-11,29;UBERON:0003080,1.60e-10,40;UBERON:0002780,3.48e-10,39;UBERON:0001890,3.48e-10,39;UBERON:0006240,3.48e-10,39;UBERON:0003056,1.21e-09,49;UBERON:0002619,5.73e-08,17;UBERON:0002021,6.14e-08,10;UBERON:0000411,6.14e-08,10;UBERON:0001950,6.14e-08,10;UBERON:0000956,6.33e-08,21;UBERON:0001869,6.33e-08,21;UBERON:0000203,6.33e-08,21;UBERON:0000025,7.06e-08,114;UBERON:0004111,5.27e-07,122;UBERON:0000922,6.14e-07,320
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39782,0.886137163047463,0.403865799792591,0.838274873204998,0.907435666231565,0.0974578807397524,0.192423683280659,0.701261413089414,1.58711268530648,5.10567692760349,3.3194126945506,3.18980771091749,1.35232715822533,3.75364950902364,4.02933573387983,1.07184189539533,7.02200945649509,16.3778034358949,21.6352861158373,20.0513429703789,18.5601436931183,17.8121455140367,20.3956352295219,17.550585006027,19.3638117386415,15.406841905463,12.4262474820437,1.66059756134683,3.99024873401031,2.73173769206615,4.132814190161,4.19226325255965,4.59608771125035,2.66696073361938,2.06035057238894,6.4183841918363,3.79045817645696,4.05566879824384,5.47016390019621,4.21386783614471,5.12201219238954,4.07791829584854,5.23923060411381,5.56244764535306,5.59436739344745,3.29668720642645,4.12156976376312,4.80016953339582,3.54951612318675,3.09967046931517,5.37781741539616,5.45834406408918,4.90764725771724,4.39027134894654,3.6829759601298,3.25929873230068,8.41713407486608,4.38949567059444,4.53120618927592,4.09231043169689,4.80304207676495,3.66522560864169,6.74488560432454,4.44470056046276,4.29742108096597,2.86932498103265,3.30887128679273,1.39120701372253
|phase1_expression=3.68342348341026,0.697950815278722,1.36499771816861,0.30246421130683,0,0.839396359559449,0.233612640595526,0,0.281577444303333,0.234064526321993,0,0.159544317990673,0,0,1.33243904726265,0.202475267389826,0,0.473193248037357,0.548457734422955,1.27316895539409,6.20816018102809,0.893618560807968,0.522399578277871,1.27993938234725,1.60586496747019,1.14846392823004,0.430761996159075,0.861884930743556,0,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0,3.02152363141385,2.33166941804883,4.03802854755699,1.56478268869608,7.19483016055474,4.83309602015838,7.19390626574849,3.21968769738334,12.9377307928474,0,0,0.336093799142464,10.5476368774738,10.8882707176728,13.9231464914909,7.68802551266472,10.0508286061686,6.33831403506179,7.45457970552091,5.33576877666684,0.449949858640699,0,0,2.69640099466564,2.30530983192933,3.94020526772215,2.8351247049655,3.99617426567626,12.5686433137674,12.3686382932904,3.79721477566358,1.72521847832825,4.5960939330501,12.1127469099328,6.38436690425939,8.29475279583715,11.2103344570665,9.24025200384338,6.25096044668112,7.53794097303729,7.87867654044352,10.5430790965999,14.4368006882097,10.9626194215309,7.64237727883732,3.71058347332602,5.13886608726142,2.02905142091174,0,0.679971333707751,0.539703191637817,0,0.448026887097336,1.12355536105401,5.45377032249785,3.37721805983729,2.82671659608272,4.3661460130771,7.69958864485907,20.3844191765317,35.5533351576666,3.030874574157,3.54703811665138,2.02209778005913,1.37020655662872,2.07150306917737,5.19547486726887,1.90833859442749,3.95805121805784,5.76538743140146,2.71300752994721,4.58595957829249,2.63899841792318,0.494389935468748,2.60278842455841,1.76922110389975,3.23533699894818,1.98757366614354,1.45462575940567,0,13.4679166625312,20.1068838540917,0.510914110417183,0.479260498023681,0,0.254140454146129,6.44099749440738,8.23501085073528,4.64921102817598,11.9938780932671,12.7857728665165,6.2336413367868,6.97637431191358,4.9901288286655,2.86136032403214,2.0217820674694,1.26265113531884,3.77349284591841,3.21862946206862,4.32149111532838,4.37043971723574,3.60593445502038,4.74020765053944,3.18585863503078,2.32833033665114,3.88022387279116,5.67318240503458,5.80638709741031,4.3839146485515,5.28289773528636,1.74126083261083,3.49829631893504,6.17006227137329,0,0,0,4.34964122324554,2.81431271977315,3.6012412292203,6.15536312521547,3.34499193970586,2.62254091908543,3.95307706075693,2.41446061259657,2.56883753207773,3.12663714835613,4.43252153013557,2.83740833410495,3.65499968563331,4.17145219052996,2.14730270016595,5.67782861123144,8.84979666461846,0,0.793351699990633,4.26576501070468,4.87697010906921,3.99489130098489,1.81515172161008,1.77902435075896,2.28270751335071,2.37264530772256,0.988193728344065,3.51869292320377,3.18330355265841,2.72949721966768,0.898819408654221,1.08069024937347,0.995706366271836,2.0863469104839,3.77020091612105,5.63538678365402,3.25842124552503,2.71533482034676,3.36651935473529,2.21327879934901,0.885660887877613,0.941992367048249,0.740382983530803,0.889357881261447,0.667380422864376,0.982794975566015,0.674586337154561,0.811440485554012,0.241177159752417,1.78238096246994,1.15078454980324,0.486405680325106,0.823684239564244,1.43768206527355,3.34926852901653,0.312037673114561,1.26289438973556,0.179397413521912,0,7.20537441649758,4.16881105895066,2.60743962307241,4.75286240170527,3.52035372432753,6.365237782789,2.61848004974615,5.65887578787617,8.98520321405289,6.64394068946325,7.65382889555938,10.1595255123758,8.80693407516067,9.69148692496127,0,0,2.45882136509518,1.93155722413313,5.13761887960934,6.44664276257117,9.3442918864705,2.7771801992481,7.57219726599016,8.19921363022941,6.46270193198397,8.36390792833932,14.704712489438,14.7199796010193,11.7395103485719,16.6585839009448,19.7643888973262,5.46246237917072,3.54850213020672,3.38324646967785,5.21238269931443,3.62934270539578,0,2.91336763385978,1.81394134178851,0.377210159511796,2.06711325016541,0.922305443831782,2.06742634534577,1.45413491791002,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,3.06103859853227,3.10460841078611,3.85806663056866,3.54680467284547,4.8159580752559,4.77192159746151,3.34911444026059,0.469343416127421,1.90648863777438,0.882113592219848,2.63818004706368,1.77610869365496,2.95533332147964,1.67121281604391,3.44695889464629,3.20628920292836,5.00648315428376,0.170870880797853,3.714963623338,1.11116716421827,1.31857919903284,0.683471138605126,1.60144721244566,0,0.419854356970974,0.414599921413271,3.81868247206045,3.47969592939249,3.25311147402958,4.75223499615926,4.18176592028937,3.49380101993884,5.39457385539283,3.2234847732881,3.14107130380836,0.90730481304255,0,9.58277995763124,3.73791365109947,4.30192075188454,5.25018208528929,4.39143399824286,6.25137664315879,5.39843297770468,7.68205870579306,24.2225085623392,14.0118790079084,15.2655903316669,0.632022241256357,1.62180172232131,2.36235201479103,0.77952493786677,0.179026695667481,0.198681354781265,0.841368146639782,0.886137163047463,0.403865799792591,0.838274873204998,0.907435666231565,0.0974578807397524,0.192423683280659,0.701261413089414,1.58711268530648,5.10567692760349,3.3194126945506,3.18980771091749,1.35232715822533,3.75364950902364,4.02933573387983,1.07184189539533,7.02200945649509,16.3778034358949,21.6352861158373,20.0513429703789,18.5601436931183,17.8121455140367,20.3956352295219,17.550585006027,19.3638117386415,15.406841905463,12.4262474820437,1.66059756134683,3.99024873401031,2.73173769206615,4.132814190161,4.19226325255965,4.59608771125035,2.66696073361938,2.06035057238894,6.4183841918363,3.79045817645696,4.05566879824384,5.47016390019621,4.21386783614471,5.12201219238954,4.07791829584854,5.23923060411381,5.56244764535306,5.59436739344745,3.29668720642645,4.12156976376312,4.80016953339582,3.54951612318675,3.09967046931517,5.37781741539616,5.45834406408918,4.90764725771724,4.39027134894654,3.6829759601298,3.25929873230068,8.41713407486608,4.38949567059444,4.53120618927592,4.09231043169689,4.80304207676495,3.66522560864169,6.74488560432454,4.44470056046276,4.29742108096597,2.86932498103265,3.30887128679273,1.39120701372253
|short_description=p1@Garnl3
|short_description=p1@Garnl3
}}
}}

Latest revision as of 15:01, 26 September 2015

Short description:p1@Garnl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Garnl3_5end
Coexpression cluster:MCL_coexpression_mm9:797
Association with transcript: 0bp_to_ENSMUST00000124000_5end
EntrezGene:Garnl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Garnl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.24
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F95.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.47
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D511.99
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G18.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E67.65
lung, neonate N20.CNhs11109.822-18A410.16
lung, neonate N25.CNhs11119.1359-25C78.81
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A36.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.76
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C73.10
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.96
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G56.25
testis, neonate N00.CNhs11189.1300-22B75.40
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D924.22
testis, neonate N20.CNhs11110.839-18H314.01
testis, neonate N30.CNhs11130.1391-42E215.27
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell6.74e-1339
electrically active cell6.74e-1339
ectodermal cell3.64e-1244
neurectodermal cell3.64e-1244
neuron4.36e-1233
neuronal stem cell4.36e-1233
neuroblast4.36e-1233
electrically signaling cell4.36e-1233
neural cell4.43e-1243
CNS neuron (sensu Vertebrata)9.99e-0823
neuroblast (sensu Vertebrata)9.99e-0823

Uber anatomy
Ontology termp-valuen
nervous system9.76e-2375
central nervous system1.56e-2273
ectoderm-derived structure5.81e-1895
ectoderm5.81e-1895
presumptive ectoderm5.81e-1895
regional part of nervous system4.72e-1654
structure with developmental contribution from neural crest2.26e-1592
neurectoderm4.24e-1564
neural plate4.24e-1564
presumptive neural plate4.24e-1564
neural tube7.03e-1552
neural rod7.03e-1552
future spinal cord7.03e-1552
neural keel7.03e-1552
gray matter1.14e-1334
ecto-epithelium2.80e-1373
brain2.32e-1247
future brain2.32e-1247
regional part of brain4.24e-1246
brain grey matter5.02e-1129
regional part of telencephalon5.02e-1129
telencephalon5.02e-1129
anterior neural tube1.60e-1040
regional part of forebrain3.48e-1039
forebrain3.48e-1039
future forebrain3.48e-1039
pre-chordal neural plate1.21e-0949
regional part of cerebral cortex5.73e-0817
occipital lobe6.14e-0810
visual cortex6.14e-0810
neocortex6.14e-0810
cerebral cortex6.33e-0821
cerebral hemisphere6.33e-0821
pallium6.33e-0821
tube7.06e-08114
anatomical conduit5.27e-07122
embryo6.14e-07320
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