FFCP PHASE1:Mm9::chr15:103368452..103368463,-: Difference between revisions
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{{FFCP|EntrezGene=58200|HGNC=|MCL_coexpression_id=2960|UniProt=Q9ERT9|association_with_transcript=-29bp_to_ENSMUST00000023133,NM_021391,uc007xyj.1_5end|description=CAGE_peak_2_at_Ppp1r1a_5end|id=chr15:103368452..103368463,-|ontology_enrichment_celltype=CL:0000117!6.69e-14!23;CL:0000337!6.69e-14!23;CL:0000221!1.06e-12!44;CL:0000133!1.06e-12!44;CL:0002319!1.18e-12!43;CL:0000540!4.05e-10!33;CL:0000047!4.05e-10!33;CL:0000031!4.05e-10!33;CL:0000404!4.05e-10!33;CL:0000055!9.64e-09!50;CL:0000393!8.31e-07!39;CL:0000211!8.31e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-22,23;CL:0000337,1.77e-22,23;CL:0002319,1.86e-16,43;CL:0000221,6.76e-16,44;CL:0000133,6.76e-16,44;CL:0000540,1.15e-13,33;CL:0000047,1.15e-13,33;CL:0000031,1.15e-13,33;CL:0000404,1.15e-13,33;CL:0000393,1.33e-10,39;CL:0000211,1.33e-10,39;CL:0002321,3.67e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.62e-30!75;UBERON:0001016!3.62e-30!75;UBERON:0001017!3.63e-30!73;UBERON:0005743!3.63e-30!73;UBERON:0001049!1.83e-27!52;UBERON:0005068!1.83e-27!52;UBERON:0006241!1.83e-27!52;UBERON:0007135!1.83e-27!52;UBERON:0000955!4.77e-26!50;UBERON:0006238!4.77e-26!50;UBERON:0004121!1.88e-25!102;UBERON:0000924!1.88e-25!102;UBERON:0006601!1.88e-25!102;UBERON:0002616!2.52e-25!49;UBERON:0000033!2.28e-24!63;UBERON:0002346!2.92e-24!71;UBERON:0003075!2.92e-24!71;UBERON:0007284!2.92e-24!71;UBERON:0002020!4.63e-23!34;UBERON:0003080!4.42e-22!40;UBERON:0003056!1.27e-21!49;UBERON:0002780!1.41e-21!39;UBERON:0001890!1.41e-21!39;UBERON:0006240!1.41e-21!39;UBERON:0002791!1.58e-19!29;UBERON:0003528!1.58e-19!29;UBERON:0001893!1.58e-19!29;UBERON:0000956!3.71e-14!21;UBERON:0001869!3.71e-14!21;UBERON:0000203!3.71e-14!21;UBERON:0002619!2.66e-12!17;UBERON:0007811!2.82e-12!86;UBERON:0000153!2.81e-09!94;UBERON:0000025!3.44e-09!114;UBERON:0002021!6.51e-09!10;UBERON:0000411!6.51e-09!10;UBERON:0001950!6.51e-09!10;UBERON:0004111!7.30e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.38e-48,54;UBERON:0001017,9.04e-45,73;UBERON:0001049,1.04e-43,52;UBERON:0005068,1.04e-43,52;UBERON:0006241,1.04e-43,52;UBERON:0007135,1.04e-43,52;UBERON:0001016,3.69e-43,75;UBERON:0000955,1.82e-39,47;UBERON:0006238,1.82e-39,47;UBERON:0002020,3.62e-39,34;UBERON:0002616,3.49e-38,46;UBERON:0002346,3.00e-36,64;UBERON:0003075,3.00e-36,64;UBERON:0007284,3.00e-36,64;UBERON:0003080,1.26e-34,40;UBERON:0002780,1.04e-33,39;UBERON:0001890,1.04e-33,39;UBERON:0006240,1.04e-33,39;UBERON:0004121,1.56e-33,95;UBERON:0000924,1.56e-33,95;UBERON:0006601,1.56e-33,95;UBERON:0003528,1.09e-32,29;UBERON:0002791,1.09e-32,29;UBERON:0001893,1.09e-32,29;UBERON:0010371,4.71e-30,73;UBERON:0003056,1.63e-29,49;UBERON:0000956,7.37e-23,21;UBERON:0001869,7.37e-23,21;UBERON:0000203,7.37e-23,21;UBERON:0010314,4.54e-22,92;UBERON:0002619,2.04e-19,17;UBERON:0002021,4.93e-15,10;UBERON:0000411,4.93e-15,10;UBERON:0001950,4.93e-15,10;UBERON:0000025,1.70e-13,114;UBERON:0004111,8.91e-12,122;UBERON:0002420,9.77e-11,8;UBERON:0007245,9.77e-11,8;UBERON:0010009,9.77e-11,8;UBERON:0010011,9.77e-11,8;UBERON:0000454,9.77e-11,8;UBERON:0003076,5.14e-09,12;UBERON:0003057,5.14e-09,12;UBERON:0011216,5.28e-08,194;UBERON:0001948,2.06e-07,5;UBERON:0002315,2.06e-07,5;UBERON:0000369,2.26e-07,5;UBERON:0002435,2.26e-07,5;UBERON:0000204,2.26e-07,5;UBERON:0010082,2.26e-07,5|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,1.97717564461025,1.74986909166855,0.419959264876088,1.43752564364972,0,0,0,0,0,0,1.61853168687678,1.5869729378161,3.1691570175309,1.0165335962074,0,0,0,0,1.79760066311043,2.30530983192933,1.24427534770173,1.21505344498522,1.26194976810829,5.42736870367227,6.40518768759679,1.22490799214954,0.766763768145891,2.75765635983006,1.10115880999389,2.042997409363,2.30409799884365,1.71452174049252,3.20206752608434,4.68822033501084,2.23346399201105,4.50210088025344,2.75036845998258,2.65165726926301,2.70506193518296,2.05039390407831,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.578397427679647,0,1.45590164952668,0.662524555381181,0,0,1.75668478206928,1.04723353406728,0,0,0,0,1.3481157546434,5.94750783664214,3.01570445070875,4.86708096538374,5.11430914660661,1.87009240103604,2.75810147215188,0,0,0,0.631325567659422,0.260240885925407,0,1.26043490863744,0,0.340182495756639,0.512454881139399,0.468508622798644,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0.828503090142008,1.17263029990548,0.900310307305074,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.804820204198858,0.350296027101508,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0.134206418760372,5.46753866266731,1.74937841044784,0,0,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58200 | |||
|HGNC= | |||
|MCL_coexpression_id=2960 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ERT9 | |||
|association_with_transcript=-29bp_to_ENSMUST00000023133,NM_021391,uc007xyj.1_5end | |||
|cluster_id=chr15:103368452..103368463,- | |||
|description=CAGE_peak_2_at_Ppp1r1a_5end | |||
|id=chr15:103368452..103368463,- | |||
|ontology_enrichment_celltype=CL:0000117!6.69e-14!23;CL:0000337!6.69e-14!23;CL:0000221!1.06e-12!44;CL:0000133!1.06e-12!44;CL:0002319!1.18e-12!43;CL:0000540!4.05e-10!33;CL:0000047!4.05e-10!33;CL:0000031!4.05e-10!33;CL:0000404!4.05e-10!33;CL:0000055!9.64e-09!50;CL:0000393!8.31e-07!39;CL:0000211!8.31e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-22,23;CL:0000337,1.77e-22,23;CL:0002319,1.86e-16,43;CL:0000221,6.76e-16,44;CL:0000133,6.76e-16,44;CL:0000540,1.15e-13,33;CL:0000047,1.15e-13,33;CL:0000031,1.15e-13,33;CL:0000404,1.15e-13,33;CL:0000393,1.33e-10,39;CL:0000211,1.33e-10,39;CL:0002321,3.67e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.62e-30!75;UBERON:0001016!3.62e-30!75;UBERON:0001017!3.63e-30!73;UBERON:0005743!3.63e-30!73;UBERON:0001049!1.83e-27!52;UBERON:0005068!1.83e-27!52;UBERON:0006241!1.83e-27!52;UBERON:0007135!1.83e-27!52;UBERON:0000955!4.77e-26!50;UBERON:0006238!4.77e-26!50;UBERON:0004121!1.88e-25!102;UBERON:0000924!1.88e-25!102;UBERON:0006601!1.88e-25!102;UBERON:0002616!2.52e-25!49;UBERON:0000033!2.28e-24!63;UBERON:0002346!2.92e-24!71;UBERON:0003075!2.92e-24!71;UBERON:0007284!2.92e-24!71;UBERON:0002020!4.63e-23!34;UBERON:0003080!4.42e-22!40;UBERON:0003056!1.27e-21!49;UBERON:0002780!1.41e-21!39;UBERON:0001890!1.41e-21!39;UBERON:0006240!1.41e-21!39;UBERON:0002791!1.58e-19!29;UBERON:0003528!1.58e-19!29;UBERON:0001893!1.58e-19!29;UBERON:0000956!3.71e-14!21;UBERON:0001869!3.71e-14!21;UBERON:0000203!3.71e-14!21;UBERON:0002619!2.66e-12!17;UBERON:0007811!2.82e-12!86;UBERON:0000153!2.81e-09!94;UBERON:0000025!3.44e-09!114;UBERON:0002021!6.51e-09!10;UBERON:0000411!6.51e-09!10;UBERON:0001950!6.51e-09!10;UBERON:0004111!7.30e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.38e-48,54;UBERON:0001017,9.04e-45,73;UBERON:0001049,1.04e-43,52;UBERON:0005068,1.04e-43,52;UBERON:0006241,1.04e-43,52;UBERON:0007135,1.04e-43,52;UBERON:0001016,3.69e-43,75;UBERON:0000955,1.82e-39,47;UBERON:0006238,1.82e-39,47;UBERON:0002020,3.62e-39,34;UBERON:0002616,3.49e-38,46;UBERON:0002346,3.00e-36,64;UBERON:0003075,3.00e-36,64;UBERON:0007284,3.00e-36,64;UBERON:0003080,1.26e-34,40;UBERON:0002780,1.04e-33,39;UBERON:0001890,1.04e-33,39;UBERON:0006240,1.04e-33,39;UBERON:0004121,1.56e-33,95;UBERON:0000924,1.56e-33,95;UBERON:0006601,1.56e-33,95;UBERON:0003528,1.09e-32,29;UBERON:0002791,1.09e-32,29;UBERON:0001893,1.09e-32,29;UBERON:0010371,4.71e-30,73;UBERON:0003056,1.63e-29,49;UBERON:0000956,7.37e-23,21;UBERON:0001869,7.37e-23,21;UBERON:0000203,7.37e-23,21;UBERON:0010314,4.54e-22,92;UBERON:0002619,2.04e-19,17;UBERON:0002021,4.93e-15,10;UBERON:0000411,4.93e-15,10;UBERON:0001950,4.93e-15,10;UBERON:0000025,1.70e-13,114;UBERON:0004111,8.91e-12,122;UBERON:0002420,9.77e-11,8;UBERON:0007245,9.77e-11,8;UBERON:0010009,9.77e-11,8;UBERON:0010011,9.77e-11,8;UBERON:0000454,9.77e-11,8;UBERON:0003076,5.14e-09,12;UBERON:0003057,5.14e-09,12;UBERON:0011216,5.28e-08,194;UBERON:0001948,2.06e-07,5;UBERON:0002315,2.06e-07,5;UBERON:0000369,2.26e-07,5;UBERON:0002435,2.26e-07,5;UBERON:0000204,2.26e-07,5;UBERON:0010082,2.26e-07,5 | |||
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|short_description=p2@Ppp1r1a | |||
}} |
Latest revision as of 15:14, 26 September 2015
Short description: | p2@Ppp1r1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ppp1r1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2960 |
Association with transcript: | -29bp_to_ENSMUST00000023133, NM_021391, uc007xyj.1_5end |
EntrezGene: | Ppp1r1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.77e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-22 | 23 |
neural cell | 1.86e-16 | 43 |
ectodermal cell | 6.76e-16 | 44 |
neurectodermal cell | 6.76e-16 | 44 |
neuron | 1.15e-13 | 33 |
neuronal stem cell | 1.15e-13 | 33 |
neuroblast | 1.15e-13 | 33 |
electrically signaling cell | 1.15e-13 | 33 |
electrically responsive cell | 1.33e-10 | 39 |
electrically active cell | 1.33e-10 | 39 |
embryonic cell | 3.67e-07 | 70 |