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FFCP PHASE1:Mm9::chr17:56109874..56109908,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:56109874..56109908,+
|DHSsupport=NA
|short_description=p2@Shd
|DPIdataset=NA
|description=CAGE_peak_2_at_Shd_5end
|association_with_transcript=0bp_to_ENSMUST00000044216,NM_001159523,NM_009168,uc008dal.2,uc008dam.2_5end
|EntrezGene=20420
|EntrezGene=20420
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=O88834
|UniProt=O88834
|association_with_transcript=0bp_to_ENSMUST00000044216,NM_001159523,NM_009168,uc008dal.2,uc008dam.2_5end
|cluster_id=chr17:56109874..56109908,+
|description=CAGE_peak_2_at_Shd_5end
|id=chr17:56109874..56109908,+
|ontology_enrichment_celltype=CL:0000540!4.12e-16!33;CL:0000047!4.12e-16!33;CL:0000031!4.12e-16!33;CL:0000404!4.12e-16!33;CL:0000117!1.11e-15!23;CL:0000337!1.11e-15!23;CL:0000221!2.21e-12!44;CL:0000133!2.21e-12!44;CL:0002319!2.97e-12!43;CL:0000393!7.04e-11!39;CL:0000211!7.04e-11!39;CL:0000055!4.56e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.87e-19,23;CL:0000337,2.87e-19,23;CL:0000540,1.83e-18,33;CL:0000047,1.83e-18,33;CL:0000031,1.83e-18,33;CL:0000404,1.83e-18,33;CL:0000393,1.15e-13,39;CL:0000211,1.15e-13,39;CL:0000221,1.87e-11,44;CL:0000133,1.87e-11,44;CL:0002319,2.79e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.93e-23!73;UBERON:0005743!3.93e-23!73;UBERON:0000073!1.64e-22!75;UBERON:0001016!1.64e-22!75;UBERON:0002346!2.55e-21!71;UBERON:0003075!2.55e-21!71;UBERON:0007284!2.55e-21!71;UBERON:0001049!7.75e-20!52;UBERON:0005068!7.75e-20!52;UBERON:0006241!7.75e-20!52;UBERON:0007135!7.75e-20!52;UBERON:0004121!3.27e-19!102;UBERON:0000924!3.27e-19!102;UBERON:0006601!3.27e-19!102;UBERON:0000033!9.18e-19!63;UBERON:0003056!8.26e-18!49;UBERON:0002020!8.62e-18!34;UBERON:0000955!5.49e-17!50;UBERON:0006238!5.49e-17!50;UBERON:0002616!6.42e-17!49;UBERON:0003080!2.83e-15!40;UBERON:0002780!4.72e-15!39;UBERON:0001890!4.72e-15!39;UBERON:0006240!4.72e-15!39;UBERON:0002791!3.18e-14!29;UBERON:0003528!3.18e-14!29;UBERON:0001893!3.18e-14!29;UBERON:0000956!7.36e-10!21;UBERON:0001869!7.36e-10!21;UBERON:0000203!7.36e-10!21;UBERON:0000153!2.06e-09!94;UBERON:0007811!7.88e-08!86;UBERON:0000468!1.32e-07!333;UBERON:0002619!2.06e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.58e-26,64;UBERON:0003075,7.58e-26,64;UBERON:0007284,7.58e-26,64;UBERON:0001017,1.48e-24,73;UBERON:0001016,2.78e-23,75;UBERON:0000073,6.72e-23,54;UBERON:0001049,3.99e-22,52;UBERON:0005068,3.99e-22,52;UBERON:0006241,3.99e-22,52;UBERON:0007135,3.99e-22,52;UBERON:0010371,5.34e-22,73;UBERON:0002020,2.00e-21,34;UBERON:0004121,2.64e-21,95;UBERON:0000924,2.64e-21,95;UBERON:0006601,2.64e-21,95;UBERON:0003056,1.07e-20,49;UBERON:0003080,5.83e-18,40;UBERON:0002780,1.11e-17,39;UBERON:0001890,1.11e-17,39;UBERON:0006240,1.11e-17,39;UBERON:0000955,2.03e-17,47;UBERON:0006238,2.03e-17,47;UBERON:0002616,2.52e-17,46;UBERON:0003528,5.68e-17,29;UBERON:0002791,5.68e-17,29;UBERON:0001893,5.68e-17,29;UBERON:0010314,1.10e-13,92;UBERON:0000956,1.58e-11,21;UBERON:0001869,1.58e-11,21;UBERON:0000203,1.58e-11,21;UBERON:0002619,1.70e-08,17;UBERON:0002021,5.91e-07,10;UBERON:0000411,5.91e-07,10;UBERON:0001950,5.91e-07,10;UBERON:0002420,9.25e-07,8;UBERON:0007245,9.25e-07,8;UBERON:0010009,9.25e-07,8;UBERON:0010011,9.25e-07,8;UBERON:0000454,9.25e-07,8
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.659058548203415,0,0.419959264876088,0,0,0,0,0,0,0,44.5096213891115,44.4352422588508,32.9592329823213,0,0,0,0,0,0,0.768436610643109,22.7080250955566,35.3715558429029,22.7150958259493,26.2798905651499,26.9459619960969,27.5604298233647,27.2201137691791,26.6573448116906,2.20231761998777,3.57524546638526,4.45458946443106,37.0600468521845,31.0143111812169,31.7757156039624,6.70039197603314,5.06486349028512,4.73674568108111,33.2930301585245,25.0574158206421,40.0758808524396,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,2.04946557908083,2.09446706813455,0,0,0,0,2.54644086988199,1.83000241127451,14.7015591972051,5.38855392596057,2.30143911597297,4.57133698031032,2.59586020908412,0.305518091550949,0.248813941220186,0,0,4.68433594665733,5.28774840196988,4.86167750474443,3.46621081022145,4.55844544313897,6.02134485338794,4.59138450342671,0.776110112217047,5.17363183038821,8.50977360755187,8.09375171154165,5.04150184583422,3.05851974148158,1.0447564995665,0.411564272815887,1.99034266818493,0,0,0,0.414251545071004,1.64168241986767,0.36012412292203,0.946978942340841,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0.268412837520744,2.3131894342054,15.3327872445134,0,0,2.98603550749328,2.09013004674395,1.41754207454303,0.605050573870028,0.889512175379481,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,1.32767530667157,1.14248512609729,2.25415471346161,2.44381593414377,2.90928730751439,2.66516115583211,4.04713837595247,1.47610147979602,0.784993639206874,1.60416313098341,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,3.03186258832776,0.977789858652155,1.35796068620151,0.938760993154008,0.167506257441816,0,0.195133647857799,0.472905432318573,0.44292937929755,0.478364305972461,0,0,0,0,0,0,0,1.9266070798535,2.69586879162067,0,0.252470927204373,2.2085575359138,1.17131623288992,2.80050417052639,0.716906393857656,1.33679204449436,0.283076530788832,2.42886421004937,2.04579100537918,2.76701444562566,1.28528526568723,0.141940085208269,0.712262414669021,0.81443479676788,0.164970122972535,0,0.971122544619926,0.604647113929502,0.188605079755898,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,0,0,2.88097750450096,5.43306471887569,2.14337035031592,2.30542303734956,0.535106452806212,1.31639216481697,2.13125464380219,0,0,0,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0.291480836629851,4.26478194624172,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0,0,3.00519193902079,1.01659733563424,0.540026704109006,0.836353184057875,0.436725127492355,0.404593039154462,0.495920734352016,0.26175594198403,0,0,0,1.04661582230785,0.66183396182839,1.36115831840833,1.16243841129958,1.18269287843545,1.40828686374905,0.13020438484395,0.314578033277133,0,0,0,1.01362607645082,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0,0,0,0.214368379079066,0,5.64751842617067,6.90487854760765,12.0308057822273,6.8741272937475,3.42541259885321,8.3093328712867,4.05013500139084,4.95353323546643,2.26571204492102,3.10656187051092,4.15149390336707,9.57659696162474,9.04888110496911,5.10524105843418,5.44994222832754,4.59608771125035,4.4449345560323,3.09052585858341,3.53011130550997,2.52697211763797,4.56262739802432,4.33840585187975,3.37109426891577,3.45735822986294,3.9056118889817,5.23923060411381,3.82418275618023,4.43691207066522,5.76920261124629,3.38557516309114,4.11443102862498,1.77475806159337,3.57654284920981,3.0522747492789,4.04670335785922,3.63842813934209,3.29270351170991,2.89376682581627,4.07412341537585,3.36685362994643,3.32178050747688,2.85662998889134,5.32000356120596,3.09873682371932,2.89359916471712,5.9954538705107,1.87145286756327,2.79332370262788,2.10417165275728,0.882365676478062,0.695603506861264
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.659058548203415,0,0.419959264876088,0,0,0,0,0,0,0,44.5096213891115,44.4352422588508,32.9592329823213,0,0,0,0,0,0,0.768436610643109,22.7080250955566,35.3715558429029,22.7150958259493,26.2798905651499,26.9459619960969,27.5604298233647,27.2201137691791,26.6573448116906,2.20231761998777,3.57524546638526,4.45458946443106,37.0600468521845,31.0143111812169,31.7757156039624,6.70039197603314,5.06486349028512,4.73674568108111,33.2930301585245,25.0574158206421,40.0758808524396,0.075726193333184,0.226714680320357,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.304465478312141,0.230615497256059,0.301445281105245,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,2.04946557908083,2.09446706813455,0,0,0,0,2.54644086988199,1.83000241127451,14.7015591972051,5.38855392596057,2.30143911597297,4.57133698031032,2.59586020908412,0.305518091550949,0.248813941220186,0,0,4.68433594665733,5.28774840196988,4.86167750474443,3.46621081022145,4.55844544313897,6.02134485338794,4.59138450342671,0.776110112217047,5.17363183038821,8.50977360755187,8.09375171154165,5.04150184583422,3.05851974148158,1.0447564995665,0.411564272815887,1.99034266818493,0,0,0,0.414251545071004,1.64168241986767,0.36012412292203,0.946978942340841,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0.268412837520744,2.3131894342054,15.3327872445134,0,0,2.98603550749328,2.09013004674395,1.41754207454303,0.605050573870028,0.889512175379481,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,1.32767530667157,1.14248512609729,2.25415471346161,2.44381593414377,2.90928730751439,2.66516115583211,4.04713837595247,1.47610147979602,0.784993639206874,1.60416313098341,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,3.03186258832776,0.977789858652155,1.35796068620151,0.938760993154008,0.167506257441816,0,0.195133647857799,0.472905432318573,0.44292937929755,0.478364305972461,0,0,0,0,0,0,0,1.9266070798535,2.69586879162067,0,0.252470927204373,2.2085575359138,1.17131623288992,2.80050417052639,0.716906393857656,1.33679204449436,0.283076530788832,2.42886421004937,2.04579100537918,2.76701444562566,1.28528526568723,0.141940085208269,0.712262414669021,0.81443479676788,0.164970122972535,0,0.971122544619926,0.604647113929502,0.188605079755898,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,0,0,2.88097750450096,5.43306471887569,2.14337035031592,2.30542303734956,0.535106452806212,1.31639216481697,2.13125464380219,0,0,0,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0.291480836629851,4.26478194624172,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0,0,3.00519193902079,1.01659733563424,0.540026704109006,0.836353184057875,0.436725127492355,0.404593039154462,0.495920734352016,0.26175594198403,0,0,0,1.04661582230785,0.66183396182839,1.36115831840833,1.16243841129958,1.18269287843545,1.40828686374905,0.13020438484395,0.314578033277133,0,0,0,1.01362607645082,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0,0,0,0.214368379079066,0,5.64751842617067,6.90487854760765,12.0308057822273,6.8741272937475,3.42541259885321,8.3093328712867,4.05013500139084,4.95353323546643,2.26571204492102,3.10656187051092,4.15149390336707,9.57659696162474,9.04888110496911,5.10524105843418,5.44994222832754,4.59608771125035,4.4449345560323,3.09052585858341,3.53011130550997,2.52697211763797,4.56262739802432,4.33840585187975,3.37109426891577,3.45735822986294,3.9056118889817,5.23923060411381,3.82418275618023,4.43691207066522,5.76920261124629,3.38557516309114,4.11443102862498,1.77475806159337,3.57654284920981,3.0522747492789,4.04670335785922,3.63842813934209,3.29270351170991,2.89376682581627,4.07412341537585,3.36685362994643,3.32178050747688,2.85662998889134,5.32000356120596,3.09873682371932,2.89359916471712,5.9954538705107,1.87145286756327,2.79332370262788,2.10417165275728,0.882365676478062,0.695603506861264
|short_description=p2@Shd
}}
}}

Latest revision as of 16:42, 26 September 2015

Short description:p2@Shd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shd_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000044216, NM_001159523, NM_009168, uc008dal.2, uc008dam.2_5end
EntrezGene:Shd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C344.51
Mouse Granule cells, donor2.CNhs12357.11731-123E344.44
Mouse Granule cells, donor3.CNhs12108.11636-122C732.96
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.71
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D437.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.06
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.08
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F114.70
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C64.68
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H28.51
forelimb, embryo E13.CNhs10589.384-1E28.09
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G115.33
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D54.05
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H29.05
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.87e-1923
neuroblast (sensu Vertebrata)2.87e-1923
neuron1.83e-1833
neuronal stem cell1.83e-1833
neuroblast1.83e-1833
electrically signaling cell1.83e-1833
electrically responsive cell1.15e-1339
electrically active cell1.15e-1339
ectodermal cell1.87e-1144
neurectodermal cell1.87e-1144
neural cell2.79e-1143

Uber anatomy
Ontology termp-valuen
neurectoderm7.58e-2664
neural plate7.58e-2664
presumptive neural plate7.58e-2664
central nervous system1.48e-2473
nervous system2.78e-2375
regional part of nervous system6.72e-2354
neural tube3.99e-2252
neural rod3.99e-2252
future spinal cord3.99e-2252
neural keel3.99e-2252
ecto-epithelium5.34e-2273
gray matter2.00e-2134
ectoderm-derived structure2.64e-2195
ectoderm2.64e-2195
presumptive ectoderm2.64e-2195
pre-chordal neural plate1.07e-2049
anterior neural tube5.83e-1840
regional part of forebrain1.11e-1739
forebrain1.11e-1739
future forebrain1.11e-1739
brain2.03e-1747
future brain2.03e-1747
regional part of brain2.52e-1746
brain grey matter5.68e-1729
regional part of telencephalon5.68e-1729
telencephalon5.68e-1729
structure with developmental contribution from neural crest1.10e-1392
cerebral cortex1.58e-1121
cerebral hemisphere1.58e-1121
pallium1.58e-1121
regional part of cerebral cortex1.70e-0817
occipital lobe5.91e-0710
visual cortex5.91e-0710
neocortex5.91e-0710
basal ganglion9.25e-078
nuclear complex of neuraxis9.25e-078
aggregate regional part of brain9.25e-078
collection of basal ganglia9.25e-078
cerebral subcortex9.25e-078
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