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FFCP PHASE1:Mm9::chr12:62624099..62624171,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=238205
|EntrezGene=238205
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000130887,ENSMUST00000138980_5end
|association_with_transcript=0bp_to_ENSMUST00000130887,ENSMUST00000138980_5end
|cluster_id=chr12:62624099..62624171,+
|description=CAGE_peak_1_at_Lrfn5_5end
|description=CAGE_peak_1_at_Lrfn5_5end
|id=chr12:62624099..62624171,+
|id=chr12:62624099..62624171,+
|ontology_enrichment_celltype=CL:0000117!2.32e-15!23;CL:0000337!2.32e-15!23;CL:0000540!1.92e-08!33;CL:0000047!1.92e-08!33;CL:0000031!1.92e-08!33;CL:0000404!1.92e-08!33
|ontology_enrichment_celltype=CL:0000117!2.32e-15!23;CL:0000337!2.32e-15!23;CL:0000540!1.92e-08!33;CL:0000047!1.92e-08!33;CL:0000031!1.92e-08!33;CL:0000404!1.92e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.96e-21,23;CL:0000337,2.96e-21,23;CL:0000540,1.26e-13,33;CL:0000047,1.26e-13,33;CL:0000031,1.26e-13,33;CL:0000404,1.26e-13,33;CL:0000393,2.58e-10,39;CL:0000211,2.58e-10,39;CL:0000221,5.26e-09,44;CL:0000133,5.26e-09,44;CL:0002319,1.17e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.25e-25!52;UBERON:0005068!1.25e-25!52;UBERON:0006241!1.25e-25!52;UBERON:0007135!1.25e-25!52;UBERON:0000033!1.86e-24!63;UBERON:0000955!2.60e-24!50;UBERON:0006238!2.60e-24!50;UBERON:0002616!1.13e-23!49;UBERON:0002346!2.84e-22!71;UBERON:0003075!2.84e-22!71;UBERON:0007284!2.84e-22!71;UBERON:0003056!1.94e-21!49;UBERON:0000073!5.42e-21!75;UBERON:0001016!5.42e-21!75;UBERON:0002020!7.53e-21!34;UBERON:0001017!7.62e-21!73;UBERON:0005743!7.62e-21!73;UBERON:0003080!1.02e-20!40;UBERON:0002780!5.88e-20!39;UBERON:0001890!5.88e-20!39;UBERON:0006240!5.88e-20!39;UBERON:0004121!1.09e-18!102;UBERON:0000924!1.09e-18!102;UBERON:0006601!1.09e-18!102;UBERON:0002791!2.09e-17!29;UBERON:0003528!2.09e-17!29;UBERON:0001893!2.09e-17!29;UBERON:0000956!3.36e-12!21;UBERON:0001869!3.36e-12!21;UBERON:0000203!3.36e-12!21;UBERON:0007811!5.68e-12!86;UBERON:0000153!8.61e-12!94;UBERON:0002619!8.87e-10!17;UBERON:0002021!1.91e-09!10;UBERON:0000411!1.91e-09!10;UBERON:0001950!1.91e-09!10
|ontology_enrichment_uberon=UBERON:0001049!1.25e-25!52;UBERON:0005068!1.25e-25!52;UBERON:0006241!1.25e-25!52;UBERON:0007135!1.25e-25!52;UBERON:0000033!1.86e-24!63;UBERON:0000955!2.60e-24!50;UBERON:0006238!2.60e-24!50;UBERON:0002616!1.13e-23!49;UBERON:0002346!2.84e-22!71;UBERON:0003075!2.84e-22!71;UBERON:0007284!2.84e-22!71;UBERON:0003056!1.94e-21!49;UBERON:0000073!5.42e-21!75;UBERON:0001016!5.42e-21!75;UBERON:0002020!7.53e-21!34;UBERON:0001017!7.62e-21!73;UBERON:0005743!7.62e-21!73;UBERON:0003080!1.02e-20!40;UBERON:0002780!5.88e-20!39;UBERON:0001890!5.88e-20!39;UBERON:0006240!5.88e-20!39;UBERON:0004121!1.09e-18!102;UBERON:0000924!1.09e-18!102;UBERON:0006601!1.09e-18!102;UBERON:0002791!2.09e-17!29;UBERON:0003528!2.09e-17!29;UBERON:0001893!2.09e-17!29;UBERON:0000956!3.36e-12!21;UBERON:0001869!3.36e-12!21;UBERON:0000203!3.36e-12!21;UBERON:0007811!5.68e-12!86;UBERON:0000153!8.61e-12!94;UBERON:0002619!8.87e-10!17;UBERON:0002021!1.91e-09!10;UBERON:0000411!1.91e-09!10;UBERON:0001950!1.91e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-32,54;UBERON:0001049,2.54e-30,52;UBERON:0005068,2.54e-30,52;UBERON:0006241,2.54e-30,52;UBERON:0007135,2.54e-30,52;UBERON:0002020,6.84e-30,34;UBERON:0001017,3.50e-28,73;UBERON:0001016,5.88e-27,75;UBERON:0002346,1.34e-26,64;UBERON:0003075,1.34e-26,64;UBERON:0007284,1.34e-26,64;UBERON:0000955,2.49e-25,47;UBERON:0006238,2.49e-25,47;UBERON:0003528,6.05e-25,29;UBERON:0002791,6.05e-25,29;UBERON:0001893,6.05e-25,29;UBERON:0002616,1.78e-24,46;UBERON:0010371,1.57e-23,73;UBERON:0003080,1.02e-22,40;UBERON:0004121,3.11e-22,95;UBERON:0000924,3.11e-22,95;UBERON:0006601,3.11e-22,95;UBERON:0002780,1.07e-21,39;UBERON:0001890,1.07e-21,39;UBERON:0006240,1.07e-21,39;UBERON:0003056,4.12e-21,49;UBERON:0000956,1.80e-17,21;UBERON:0001869,1.80e-17,21;UBERON:0000203,1.80e-17,21;UBERON:0010314,2.35e-15,92;UBERON:0002619,5.34e-14,17;UBERON:0002021,8.26e-13,10;UBERON:0000411,8.26e-13,10;UBERON:0001950,8.26e-13,10;UBERON:0002420,1.44e-08,8;UBERON:0007245,1.44e-08,8;UBERON:0010009,1.44e-08,8;UBERON:0010011,1.44e-08,8;UBERON:0000454,1.44e-08,8;UBERON:0003076,6.04e-08,12;UBERON:0003057,6.04e-08,12;UBERON:0002240,6.08e-07,6;UBERON:0005174,6.08e-07,6;UBERON:0001137,6.08e-07,6;UBERON:0000025,7.96e-07,114
|phase1_expression=2.88267924788629,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,4.7609188134483,11.4089652631112,0,0,0,0,0,0,0,5.28817022773236,6.75029691658453,4.83747411108179,9.71213346972932,9.49734726091938,4.40966877173835,2.68367318851062,3.67687514644008,18.7196997698961,16.4716666129892,14.2854075928306,7.78129097608144,6.67859798297591,8.85552729946492,10.3297709630511,11.8180148106653,14.6686317865738,11.7851434189467,12.2439645487229,10.4383689662168,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.79928715803342,0,0,0.693941307064543,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,3.22058876712702,5.65506108396329,0,0,0,0,16.3271796951257,13.7250180845588,9.1727677042391,22.2495129846114,27.6172693916757,15.9996794310861,16.8730913590468,0.611036183101898,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0.540186389416048,2.26057226753573,1.2246569847239,0.640568601424249,1.3118241438362,3.10444044886819,0,0.189106080167819,0.703804496655795,0.43839146485515,1.39023624612799,0.348252166522167,0,1.79130840136644,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,19.9775451135921,8.84979666461846,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,11.7201930691088,9.25972324078405,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,1.06404140185364,0.891844088010353,1.15184314421485,0.608929898229199,0,0,0,0,0.645857706783622,0.301564624640779,0.238744688006273,0,0,10.7546675166096,0,0.412773735926445,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,1.49516546043979,0.992750942742586,2.13896307178452,2.71235629303235,2.53434188236167,1.5256441023948,0.5208175393758,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,23.1548255472997,28.540164663445,18.3326564300607,25.7779773515531,33.5690434687615,23.4172108190807,27.0009000092722,23.4167025676595,19.4851235863208,30.0300980816056,0.103787347584177,1.19707462020309,1.02440163452481,1.21553358534147,0.838452650511929,1.2869045591501,2.22246727801615,1.64828045791115,1.92551525755089,3.53776096469316,3.04175159868288,1.69763707247469,0.936415074698824,2.43295579138503,2.1825478203133,4.28664322154766,2.54945517078682,1.73618298417335,0.824171801606613,2.79677948255355,1.02860775715625,1.59728225543404,2.14592570952589,2.18019624948493,2.1645157495526,2.28459441307527,1.82927972872773,1.05227884575137,1.90125759384206,5.05028044491965,1.77952527186261,2.36410757701352,0.818462086339379,1.08455788830176,1.35034627686799,4.49659040288303,1.40358965067245,0.644613162144895,0.956441660344217,0.220591419119515,0.231867835620421
|phase1_expression=2.88267924788629,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,4.7609188134483,11.4089652631112,0,0,0,0,0,0,0,5.28817022773236,6.75029691658453,4.83747411108179,9.71213346972932,9.49734726091938,4.40966877173835,2.68367318851062,3.67687514644008,18.7196997698961,16.4716666129892,14.2854075928306,7.78129097608144,6.67859798297591,8.85552729946492,10.3297709630511,11.8180148106653,14.6686317865738,11.7851434189467,12.2439645487229,10.4383689662168,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,1.12674735821344,0,0,0,0,0,0,0.79928715803342,0,0,0.693941307064543,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,3.22058876712702,5.65506108396329,0,0,0,0,16.3271796951257,13.7250180845588,9.1727677042391,22.2495129846114,27.6172693916757,15.9996794310861,16.8730913590468,0.611036183101898,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0.540186389416048,2.26057226753573,1.2246569847239,0.640568601424249,1.3118241438362,3.10444044886819,0,0.189106080167819,0.703804496655795,0.43839146485515,1.39023624612799,0.348252166522167,0,1.79130840136644,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,19.9775451135921,8.84979666461846,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,11.7201930691088,9.25972324078405,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,1.06404140185364,0.891844088010353,1.15184314421485,0.608929898229199,0,0,0,0,0.645857706783622,0.301564624640779,0.238744688006273,0,0,10.7546675166096,0,0.412773735926445,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,1.49516546043979,0.992750942742586,2.13896307178452,2.71235629303235,2.53434188236167,1.5256441023948,0.5208175393758,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,23.1548255472997,28.540164663445,18.3326564300607,25.7779773515531,33.5690434687615,23.4172108190807,27.0009000092722,23.4167025676595,19.4851235863208,30.0300980816056,0.103787347584177,1.19707462020309,1.02440163452481,1.21553358534147,0.838452650511929,1.2869045591501,2.22246727801615,1.64828045791115,1.92551525755089,3.53776096469316,3.04175159868288,1.69763707247469,0.936415074698824,2.43295579138503,2.1825478203133,4.28664322154766,2.54945517078682,1.73618298417335,0.824171801606613,2.79677948255355,1.02860775715625,1.59728225543404,2.14592570952589,2.18019624948493,2.1645157495526,2.28459441307527,1.82927972872773,1.05227884575137,1.90125759384206,5.05028044491965,1.77952527186261,2.36410757701352,0.818462086339379,1.08455788830176,1.35034627686799,4.49659040288303,1.40358965067245,0.644613162144895,0.956441660344217,0.220591419119515,0.231867835620421
|short_description=p1@Lrfn5
|short_description=p1@Lrfn5
}}
}}

Latest revision as of 17:10, 26 September 2015

Short description:p1@Lrfn5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrfn5_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000130887, ENSMUST00000138980_5end
EntrezGene:Lrfn5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrfn5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.33
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F19.17
cortex, adult.CNhs10473.12-14D522.25
cortex, neonate N30.CNhs11107.1392-42F227.62
diencephalon, adult.CNhs10482.20-12F216.00
diencephalon, neonate N30.CNhs11201.1388-42B216.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.98
hippocampus, neonate N00.CNhs11228.627-43G18.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.72
medulla oblongata, neonate N30.CNhs11200.1396-42A39.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A523.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.03
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.96e-2123
neuroblast (sensu Vertebrata)2.96e-2123
neuron1.26e-1333
neuronal stem cell1.26e-1333
neuroblast1.26e-1333
electrically signaling cell1.26e-1333
electrically responsive cell2.58e-1039
electrically active cell2.58e-1039
ectodermal cell5.26e-0944
neurectodermal cell5.26e-0944
neural cell1.17e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.28e-3254
neural tube2.54e-3052
neural rod2.54e-3052
future spinal cord2.54e-3052
neural keel2.54e-3052
gray matter6.84e-3034
central nervous system3.50e-2873
nervous system5.88e-2775
neurectoderm1.34e-2664
neural plate1.34e-2664
presumptive neural plate1.34e-2664
brain2.49e-2547
future brain2.49e-2547
brain grey matter6.05e-2529
regional part of telencephalon6.05e-2529
telencephalon6.05e-2529
regional part of brain1.78e-2446
ecto-epithelium1.57e-2373
anterior neural tube1.02e-2240
ectoderm-derived structure3.11e-2295
ectoderm3.11e-2295
presumptive ectoderm3.11e-2295
regional part of forebrain1.07e-2139
forebrain1.07e-2139
future forebrain1.07e-2139
pre-chordal neural plate4.12e-2149
cerebral cortex1.80e-1721
cerebral hemisphere1.80e-1721
pallium1.80e-1721
structure with developmental contribution from neural crest2.35e-1592
regional part of cerebral cortex5.34e-1417
occipital lobe8.26e-1310
visual cortex8.26e-1310
neocortex8.26e-1310
basal ganglion1.44e-088
nuclear complex of neuraxis1.44e-088
aggregate regional part of brain1.44e-088
collection of basal ganglia1.44e-088
cerebral subcortex1.44e-088
posterior neural tube6.04e-0812
chordal neural plate6.04e-0812
spinal cord6.08e-076
dorsal region element6.08e-076
dorsum6.08e-076
tube7.96e-07114
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