FFCP PHASE1:Mm9::chr12:73509921..73509932,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104001 | |EntrezGene=104001 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q4FJL2,Q8K0T0 | |UniProt=Q4FJL2,Q8K0T0 | ||
|association_with_transcript=0bp_to_NM_153457,uc007nvk.1_5end | |association_with_transcript=0bp_to_NM_153457,uc007nvk.1_5end | ||
|cluster_id=chr12:73509921..73509932,- | |||
|description=CAGE_peak_6_at_Rtn1_5end | |description=CAGE_peak_6_at_Rtn1_5end | ||
|id=chr12:73509921..73509932,- | |id=chr12:73509921..73509932,- | ||
|ontology_enrichment_celltype=CL:0000117!2.65e-16!23;CL:0000337!2.65e-16!23;CL:0000221!1.53e-11!44;CL:0000133!1.53e-11!44;CL:0002319!3.34e-11!43;CL:0000540!9.92e-11!33;CL:0000047!9.92e-11!33;CL:0000031!9.92e-11!33;CL:0000404!9.92e-11!33;CL:0000055!2.62e-08!50;CL:0000393!7.18e-08!39;CL:0000211!7.18e-08!39 | |ontology_enrichment_celltype=CL:0000117!2.65e-16!23;CL:0000337!2.65e-16!23;CL:0000221!1.53e-11!44;CL:0000133!1.53e-11!44;CL:0002319!3.34e-11!43;CL:0000540!9.92e-11!33;CL:0000047!9.92e-11!33;CL:0000031!9.92e-11!33;CL:0000404!9.92e-11!33;CL:0000055!2.62e-08!50;CL:0000393!7.18e-08!39;CL:0000211!7.18e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.71e-20,23;CL:0000337,2.71e-20,23;CL:0000540,8.19e-13,33;CL:0000047,8.19e-13,33;CL:0000031,8.19e-13,33;CL:0000404,8.19e-13,33;CL:0000393,3.44e-10,39;CL:0000211,3.44e-10,39;CL:0002319,5.40e-10,43;CL:0000221,1.15e-09,44;CL:0000133,1.15e-09,44;CL:0002612,4.08e-07,3;CL:0002613,7.68e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.40e-29!73;UBERON:0005743!1.40e-29!73;UBERON:0001049!1.78e-28!52;UBERON:0005068!1.78e-28!52;UBERON:0006241!1.78e-28!52;UBERON:0007135!1.78e-28!52;UBERON:0000073!3.15e-28!75;UBERON:0001016!3.15e-28!75;UBERON:0002020!2.21e-26!34;UBERON:0000955!5.26e-26!50;UBERON:0006238!5.26e-26!50;UBERON:0002346!2.76e-25!71;UBERON:0003075!2.76e-25!71;UBERON:0007284!2.76e-25!71;UBERON:0002616!4.46e-25!49;UBERON:0000033!8.05e-24!63;UBERON:0004121!6.53e-23!102;UBERON:0000924!6.53e-23!102;UBERON:0006601!6.53e-23!102;UBERON:0002791!2.63e-21!29;UBERON:0003528!2.63e-21!29;UBERON:0001893!2.63e-21!29;UBERON:0003080!1.76e-19!40;UBERON:0003056!4.97e-19!49;UBERON:0002780!1.47e-18!39;UBERON:0001890!1.47e-18!39;UBERON:0006240!1.47e-18!39;UBERON:0000956!3.05e-14!21;UBERON:0001869!3.05e-14!21;UBERON:0000203!3.05e-14!21;UBERON:0007811!6.64e-13!86;UBERON:0002619!1.64e-12!17;UBERON:0000153!1.77e-10!94;UBERON:0002021!7.58e-10!10;UBERON:0000411!7.58e-10!10;UBERON:0001950!7.58e-10!10;UBERON:0003076!1.46e-09!12;UBERON:0003057!1.46e-09!12;UBERON:0002420!2.52e-08!8;UBERON:0007245!2.52e-08!8;UBERON:0010009!2.52e-08!8;UBERON:0010011!2.52e-08!8;UBERON:0000454!2.52e-08!8;UBERON:0002240!5.08e-07!6;UBERON:0005174!5.08e-07!6;UBERON:0001137!5.08e-07!6;UBERON:0000025!7.50e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!1.40e-29!73;UBERON:0005743!1.40e-29!73;UBERON:0001049!1.78e-28!52;UBERON:0005068!1.78e-28!52;UBERON:0006241!1.78e-28!52;UBERON:0007135!1.78e-28!52;UBERON:0000073!3.15e-28!75;UBERON:0001016!3.15e-28!75;UBERON:0002020!2.21e-26!34;UBERON:0000955!5.26e-26!50;UBERON:0006238!5.26e-26!50;UBERON:0002346!2.76e-25!71;UBERON:0003075!2.76e-25!71;UBERON:0007284!2.76e-25!71;UBERON:0002616!4.46e-25!49;UBERON:0000033!8.05e-24!63;UBERON:0004121!6.53e-23!102;UBERON:0000924!6.53e-23!102;UBERON:0006601!6.53e-23!102;UBERON:0002791!2.63e-21!29;UBERON:0003528!2.63e-21!29;UBERON:0001893!2.63e-21!29;UBERON:0003080!1.76e-19!40;UBERON:0003056!4.97e-19!49;UBERON:0002780!1.47e-18!39;UBERON:0001890!1.47e-18!39;UBERON:0006240!1.47e-18!39;UBERON:0000956!3.05e-14!21;UBERON:0001869!3.05e-14!21;UBERON:0000203!3.05e-14!21;UBERON:0007811!6.64e-13!86;UBERON:0002619!1.64e-12!17;UBERON:0000153!1.77e-10!94;UBERON:0002021!7.58e-10!10;UBERON:0000411!7.58e-10!10;UBERON:0001950!7.58e-10!10;UBERON:0003076!1.46e-09!12;UBERON:0003057!1.46e-09!12;UBERON:0002420!2.52e-08!8;UBERON:0007245!2.52e-08!8;UBERON:0010009!2.52e-08!8;UBERON:0010011!2.52e-08!8;UBERON:0000454!2.52e-08!8;UBERON:0002240!5.08e-07!6;UBERON:0005174!5.08e-07!6;UBERON:0001137!5.08e-07!6;UBERON:0000025!7.50e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.22e-42,54;UBERON:0001049,4.06e-39,52;UBERON:0005068,4.06e-39,52;UBERON:0006241,4.06e-39,52;UBERON:0007135,4.06e-39,52;UBERON:0001017,9.20e-39,73;UBERON:0001016,1.81e-37,75;UBERON:0002020,6.70e-34,34;UBERON:0000955,1.33e-30,47;UBERON:0006238,1.33e-30,47;UBERON:0002346,4.12e-30,64;UBERON:0003075,4.12e-30,64;UBERON:0007284,4.12e-30,64;UBERON:0002616,4.91e-29,46;UBERON:0004121,1.64e-27,95;UBERON:0000924,1.64e-27,95;UBERON:0006601,1.64e-27,95;UBERON:0010371,2.66e-25,73;UBERON:0003528,5.60e-25,29;UBERON:0002791,5.60e-25,29;UBERON:0001893,5.60e-25,29;UBERON:0003080,6.50e-23,40;UBERON:0002780,2.21e-21,39;UBERON:0001890,2.21e-21,39;UBERON:0006240,2.21e-21,39;UBERON:0010314,3.02e-18,92;UBERON:0003076,1.39e-17,12;UBERON:0003057,1.39e-17,12;UBERON:0002021,1.40e-17,10;UBERON:0000411,1.40e-17,10;UBERON:0001950,1.40e-17,10;UBERON:0003056,1.62e-17,49;UBERON:0002420,1.22e-14,8;UBERON:0007245,1.22e-14,8;UBERON:0010009,1.22e-14,8;UBERON:0010011,1.22e-14,8;UBERON:0000454,1.22e-14,8;UBERON:0002619,4.03e-14,17;UBERON:0000025,4.94e-13,114;UBERON:0000956,5.06e-13,21;UBERON:0001869,5.06e-13,21;UBERON:0000203,5.06e-13,21;UBERON:0002240,3.97e-12,6;UBERON:0005174,3.97e-12,6;UBERON:0001137,3.97e-12,6;UBERON:0004111,1.31e-11,122;UBERON:0001948,9.35e-11,5;UBERON:0002315,9.35e-11,5;UBERON:0000369,1.75e-10,5;UBERON:0002435,1.75e-10,5;UBERON:0000204,1.75e-10,5;UBERON:0010082,1.75e-10,5;UBERON:0011216,2.02e-08,194;UBERON:0002950,1.45e-07,4;UBERON:0001891,1.45e-07,4;UBERON:0009616,1.45e-07,4;UBERON:0010286,1.45e-07,4;UBERON:0004733,2.57e-07,6;UBERON:0004732,2.57e-07,6;UBERON:0002028,2.57e-07,6;UBERON:0007277,2.57e-07,6;UBERON:0002257,4.08e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,1.05798195854407,3.80298842103708,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,3.71346279724945,4.8591079009355,0.61245399607477,0.479227355091182,0,2.20231761998777,2.55374676170375,1.53606533256243,3.69281605644543,4.11694396210843,3.64639359389732,1.3959149950069,1.68828783009504,3.20876320331301,5.89257170947335,5.69486723196412,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.452167921657868,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,4.39171195517321,2.72280718857492,0,0,0,0,3.89455662452539,6.40500843946077,3.26701315493447,3.82413504423008,5.62574006126727,3.94797284663164,4.70499662896497,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0.544291993210623,0.512454881139399,0.655912071918102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04246778825747,2.98423375899925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.64096361229084,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,3.53453448063988,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,5.06357760157895,2.29158205375759,2.40594455281163,3.42541259885321,3.7769694869485,4.05013500139084,3.15224842256954,2.71885445390523,2.5888015587591,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0.44449345560323,1.03017528619447,0.962757628775446,0.505394423527595,1.2673964994512,0.754505365544305,0.280924522409647,0.832326981263301,0.861532034334199,0,0.927074607558844,1.15745532278223,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0.436039249896986,0.846984423737976,0.507687647350059,0.548783918618318,1.05227884575137,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0.409231043169689,0.154936841185966,0.385813221962283,1.99848462350357,1.63752125911786,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,1.05798195854407,3.80298842103708,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,3.71346279724945,4.8591079009355,0.61245399607477,0.479227355091182,0,2.20231761998777,2.55374676170375,1.53606533256243,3.69281605644543,4.11694396210843,3.64639359389732,1.3959149950069,1.68828783009504,3.20876320331301,5.89257170947335,5.69486723196412,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0.452167921657868,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,4.39171195517321,2.72280718857492,0,0,0,0,3.89455662452539,6.40500843946077,3.26701315493447,3.82413504423008,5.62574006126727,3.94797284663164,4.70499662896497,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0.544291993210623,0.512454881139399,0.655912071918102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04246778825747,2.98423375899925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.64096361229084,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,3.53453448063988,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,5.06357760157895,2.29158205375759,2.40594455281163,3.42541259885321,3.7769694869485,4.05013500139084,3.15224842256954,2.71885445390523,2.5888015587591,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0.44449345560323,1.03017528619447,0.962757628775446,0.505394423527595,1.2673964994512,0.754505365544305,0.280924522409647,0.832326981263301,0.861532034334199,0,0.927074607558844,1.15745532278223,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0.436039249896986,0.846984423737976,0.507687647350059,0.548783918618318,1.05227884575137,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0.409231043169689,0.154936841185966,0.385813221962283,1.99848462350357,1.63752125911786,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p6@Rtn1 | |short_description=p6@Rtn1 | ||
}} | }} |
Latest revision as of 18:18, 26 September 2015
Short description: | p6@Rtn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rtn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_153457, uc007nvk.1_5end |
EntrezGene: | Rtn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.71e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.71e-20 | 23 |
neuron | 8.19e-13 | 33 |
neuronal stem cell | 8.19e-13 | 33 |
neuroblast | 8.19e-13 | 33 |
electrically signaling cell | 8.19e-13 | 33 |
electrically responsive cell | 3.44e-10 | 39 |
electrically active cell | 3.44e-10 | 39 |
neural cell | 5.40e-10 | 43 |
ectodermal cell | 1.15e-09 | 44 |
neurectodermal cell | 1.15e-09 | 44 |
neuron of the ventral spinal cord | 4.08e-07 | 3 |
striatum neuron | 7.68e-07 | 3 |