Personal tools

FFCP PHASE1:Mm9::chr15:37721748..37721760,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=52589
|EntrezGene=52589
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3Z2Z8,Q91X97
|UniProt=D3Z2Z8,Q91X97
|association_with_transcript=0bp_to_ENSMUST00000148652,ENSMUST00000168992,NM_001170866,uc011zsg.1_5end
|association_with_transcript=0bp_to_ENSMUST00000148652,ENSMUST00000168992,NM_001170866,uc011zsg.1_5end
|cluster_id=chr15:37721748..37721760,-
|description=CAGE_peak_10_at_Ncald_5end
|description=CAGE_peak_10_at_Ncald_5end
|id=chr15:37721748..37721760,-
|id=chr15:37721748..37721760,-
|ontology_enrichment_celltype=CL:0000117!7.67e-07!23;CL:0000337!7.67e-07!23
|ontology_enrichment_celltype=CL:0000117!7.67e-07!23;CL:0000337!7.67e-07!23
|ontology_enrichment_celltype_v019_2=CL:0002610,3.15e-09,3;CL:0002614,3.36e-08,3;CL:0000117,2.10e-07,23;CL:0000337,2.10e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.15e-17!52;UBERON:0005068!4.15e-17!52;UBERON:0006241!4.15e-17!52;UBERON:0007135!4.15e-17!52;UBERON:0000955!1.96e-16!50;UBERON:0006238!1.96e-16!50;UBERON:0002616!8.52e-16!49;UBERON:0000033!9.01e-16!63;UBERON:0002346!1.80e-15!71;UBERON:0003075!1.80e-15!71;UBERON:0007284!1.80e-15!71;UBERON:0002020!1.89e-14!34;UBERON:0001017!6.15e-13!73;UBERON:0005743!6.15e-13!73;UBERON:0003056!7.58e-13!49;UBERON:0000025!5.07e-12!114;UBERON:0000073!5.29e-12!75;UBERON:0001016!5.29e-12!75;UBERON:0003080!8.94e-12!40;UBERON:0002791!1.26e-11!29;UBERON:0003528!1.26e-11!29;UBERON:0001893!1.26e-11!29;UBERON:0004121!2.98e-11!102;UBERON:0000924!2.98e-11!102;UBERON:0006601!2.98e-11!102;UBERON:0002780!4.05e-11!39;UBERON:0001890!4.05e-11!39;UBERON:0006240!4.05e-11!39;UBERON:0004111!8.02e-11!122;UBERON:0000153!5.64e-10!94;UBERON:0007811!1.03e-09!86;UBERON:0002021!1.26e-08!10;UBERON:0000411!1.26e-08!10;UBERON:0001950!1.26e-08!10;UBERON:0002619!2.12e-07!17;UBERON:0000956!3.12e-07!21;UBERON:0001869!3.12e-07!21;UBERON:0000203!3.12e-07!21;UBERON:0000477!4.85e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.05e-35,54;UBERON:0001049,1.77e-30,52;UBERON:0005068,1.77e-30,52;UBERON:0006241,1.77e-30,52;UBERON:0007135,1.77e-30,52;UBERON:0001017,3.34e-30,73;UBERON:0000955,3.16e-29,47;UBERON:0006238,3.16e-29,47;UBERON:0001016,3.19e-29,75;UBERON:0002616,1.91e-27,46;UBERON:0002021,4.41e-25,10;UBERON:0000411,4.41e-25,10;UBERON:0001950,4.41e-25,10;UBERON:0002346,1.21e-23,64;UBERON:0003075,1.21e-23,64;UBERON:0007284,1.21e-23,64;UBERON:0002020,3.76e-23,34;UBERON:0003528,2.75e-22,29;UBERON:0002791,2.75e-22,29;UBERON:0001893,2.75e-22,29;UBERON:0003080,7.34e-22,40;UBERON:0004121,1.09e-21,95;UBERON:0000924,1.09e-21,95;UBERON:0006601,1.09e-21,95;UBERON:0002780,4.85e-20,39;UBERON:0001890,4.85e-20,39;UBERON:0006240,4.85e-20,39;UBERON:0010371,5.42e-20,73;UBERON:0003056,5.56e-17,49;UBERON:0002619,8.77e-17,17;UBERON:0000956,6.04e-16,21;UBERON:0001869,6.04e-16,21;UBERON:0000203,6.04e-16,21;UBERON:0010314,1.26e-14,92;UBERON:0000025,8.82e-13,114;UBERON:0004111,1.57e-11,122;UBERON:0002950,1.26e-10,4;UBERON:0001891,1.26e-10,4;UBERON:0009616,1.26e-10,4;UBERON:0010286,1.26e-10,4;UBERON:0004684,3.15e-09,3;UBERON:0002275,3.15e-09,3;UBERON:0003076,5.68e-09,12;UBERON:0003057,5.68e-09,12;UBERON:0011216,9.78e-09,194;UBERON:0002038,3.36e-08,3;UBERON:0009663,3.36e-08,3;UBERON:0009661,3.36e-08,3;UBERON:0000125,3.36e-08,3;UBERON:0002308,3.36e-08,3;UBERON:0002420,1.78e-07,8;UBERON:0007245,1.78e-07,8;UBERON:0010009,1.78e-07,8;UBERON:0010011,1.78e-07,8;UBERON:0000454,1.78e-07,8;UBERON:0004733,9.50e-07,6;UBERON:0004732,9.50e-07,6;UBERON:0002028,9.50e-07,6;UBERON:0007277,9.50e-07,6
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0.55994568650145,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,1.14260393761521,1.98781686856452,0.244981598429908,0.191690942036473,0,6.60695285996332,4.97980618532232,5.68344173048101,0.659431438650969,0.640413505216868,1.04182674111352,3.35019598801657,3.93933827022176,2.59757021220577,0.883885756421003,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,1.46390398505774,1.67557365450764,0,0,0,0,4.6435098215495,3.20250421973039,0.502617408451458,7.12679712788333,4.60287823194595,5.61027720310812,3.73154905055843,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.468508622798644,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0.823128545631774,0,0,0,0.284163499395593,0.414251545071004,0,0.540186184383045,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.493679549740441,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.805238512562231,2.3131894342054,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.358794827043824,0,1.66277871149944,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.780534591431195,0.472905432318573,0.221464689648775,0.318909537314974,1.14704320301017,0.690739927463582,0.144649058581512,0,0,0,0,4.17431533968259,3.5163505977661,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.180938774784468,0.119372344003136,0,0.291480836629851,2.22510362412612,0.170870880797853,0.412773735926445,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0,0,0,0,6.21227026878773,4.60325236507177,1.71868654031819,3.95262319390481,1.37016503954128,6.0431511791176,3.37511250115903,4.05289082901798,4.98456649882625,8.28416498802912,0,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0,0.377252682772152,0.280924522409647,0.384150914429216,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0.55994568650145,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,1.14260393761521,1.98781686856452,0.244981598429908,0.191690942036473,0,6.60695285996332,4.97980618532232,5.68344173048101,0.659431438650969,0.640413505216868,1.04182674111352,3.35019598801657,3.93933827022176,2.59757021220577,0.883885756421003,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.247194967734374,0.433798070759735,0,0.323533699894818,0.220841518460394,0,0,1.46390398505774,1.67557365450764,0,0,0,0,4.6435098215495,3.20250421973039,0.502617408451458,7.12679712788333,4.60287823194595,5.61027720310812,3.73154905055843,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0.30140963567143,0.136072998302656,0.2562274405697,0.468508622798644,0.517406741478031,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0.823128545631774,0,0,0,0.284163499395593,0.414251545071004,0,0.540186184383045,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.493679549740441,0.32833492815819,0.0810688095458557,0.438599962275997,0.439100230582101,0.805238512562231,2.3131894342054,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.210407459670956,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.358794827043824,0,1.66277871149944,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.780534591431195,0.472905432318573,0.221464689648775,0.318909537314974,1.14704320301017,0.690739927463582,0.144649058581512,0,0,0,0,4.17431533968259,3.5163505977661,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0.354680467284547,0.178368817602071,0,0.608929898229199,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.180938774784468,0.119372344003136,0,0.291480836629851,2.22510362412612,0.170870880797853,0.412773735926445,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0,0,0,0,0,0,0.205421914329655,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0,0.167884616364078,0.19318959403219,0,0,0,0,6.21227026878773,4.60325236507177,1.71868654031819,3.95262319390481,1.37016503954128,6.0431511791176,3.37511250115903,4.05289082901798,4.98456649882625,8.28416498802912,0,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0,0.64183841918363,0,0,0.377252682772152,0.280924522409647,0.384150914429216,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,0.476872379894642,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0,0,0.464810523557898,0,0.499621155875892,0.233931608445408,0,0,0,0.695603506861264
|short_description=p10@Ncald
|short_description=p10@Ncald
}}
}}

Latest revision as of 18:29, 26 September 2015

Short description:p10@Ncald
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Ncald_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000148652, ENSMUST00000168992, NM_001170866, uc011zsg.1_5end
EntrezGene:Ncald
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p10@Ncald

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron3.15e-093
neuron of the substantia nigra3.36e-083
CNS neuron (sensu Vertebrata)2.10e-0723
neuroblast (sensu Vertebrata)2.10e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.05e-3554
neural tube1.77e-3052
neural rod1.77e-3052
future spinal cord1.77e-3052
neural keel1.77e-3052
central nervous system3.34e-3073
brain3.16e-2947
future brain3.16e-2947
nervous system3.19e-2975
regional part of brain1.91e-2746
occipital lobe4.41e-2510
visual cortex4.41e-2510
neocortex4.41e-2510
neurectoderm1.21e-2364
neural plate1.21e-2364
presumptive neural plate1.21e-2364
gray matter3.76e-2334
brain grey matter2.75e-2229
regional part of telencephalon2.75e-2229
telencephalon2.75e-2229
anterior neural tube7.34e-2240
ectoderm-derived structure1.09e-2195
ectoderm1.09e-2195
presumptive ectoderm1.09e-2195
regional part of forebrain4.85e-2039
forebrain4.85e-2039
future forebrain4.85e-2039
ecto-epithelium5.42e-2073
pre-chordal neural plate5.56e-1749
regional part of cerebral cortex8.77e-1717
cerebral cortex6.04e-1621
cerebral hemisphere6.04e-1621
pallium6.04e-1621
structure with developmental contribution from neural crest1.26e-1492
tube8.82e-13114
anatomical conduit1.57e-11122
regional part of midbrain1.26e-104
midbrain1.26e-104
presumptive midbrain1.26e-104
midbrain neural tube1.26e-104
raphe nuclei3.15e-093
reticular formation3.15e-093
posterior neural tube5.68e-0912
chordal neural plate5.68e-0912
organ system subdivision9.78e-09194
substantia nigra3.36e-083
telencephalic nucleus3.36e-083
midbrain nucleus3.36e-083
neural nucleus3.36e-083
nucleus of brain3.36e-083
basal ganglion1.78e-078
nuclear complex of neuraxis1.78e-078
aggregate regional part of brain1.78e-078
collection of basal ganglia1.78e-078
cerebral subcortex1.78e-078
segmental subdivision of hindbrain9.50e-076
segmental subdivision of nervous system9.50e-076
hindbrain9.50e-076
presumptive hindbrain9.50e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:37721748..37721760,-&oldid=4267853"