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FFCP PHASE1:Mm9::chr15:39029607..39029621,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:39029607..39029621,+
|DHSsupport=NA
|short_description=p3@Rims2
|DPIdataset=NA
|description=CAGE_peak_3_at_Rims2_5end
|association_with_transcript=-256bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end
|EntrezGene=116838
|EntrezGene=116838
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81
|UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81
|association_with_transcript=-256bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end
|cluster_id=chr15:39029607..39029621,+
|description=CAGE_peak_3_at_Rims2_5end
|id=chr15:39029607..39029621,+
|ontology_enrichment_celltype=CL:0000117!1.38e-09!23;CL:0000337!1.38e-09!23;CL:0000540!2.27e-09!33;CL:0000047!2.27e-09!33;CL:0000031!2.27e-09!33;CL:0000404!2.27e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-12,23;CL:0000337,2.53e-12,23;CL:0000540,5.55e-08,33;CL:0000047,5.55e-08,33;CL:0000031,5.55e-08,33;CL:0000404,5.55e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.43e-28!71;UBERON:0003075!3.43e-28!71;UBERON:0007284!3.43e-28!71;UBERON:0004121!4.35e-24!102;UBERON:0000924!4.35e-24!102;UBERON:0006601!4.35e-24!102;UBERON:0000033!3.89e-23!63;UBERON:0001017!8.67e-23!73;UBERON:0005743!8.67e-23!73;UBERON:0000073!2.69e-22!75;UBERON:0001016!2.69e-22!75;UBERON:0001049!5.50e-22!52;UBERON:0005068!5.50e-22!52;UBERON:0006241!5.50e-22!52;UBERON:0007135!5.50e-22!52;UBERON:0000955!2.62e-21!50;UBERON:0006238!2.62e-21!50;UBERON:0002616!1.31e-20!49;UBERON:0003056!4.46e-20!49;UBERON:0003080!1.79e-16!40;UBERON:0002780!9.22e-16!39;UBERON:0001890!9.22e-16!39;UBERON:0006240!9.22e-16!39;UBERON:0002020!9.11e-14!34;UBERON:0002791!2.60e-11!29;UBERON:0003528!2.60e-11!29;UBERON:0001893!2.60e-11!29;UBERON:0007811!6.26e-10!86;UBERON:0000956!2.25e-07!21;UBERON:0001869!2.25e-07!21;UBERON:0000203!2.25e-07!21;UBERON:0000153!3.09e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.54e-32,64;UBERON:0003075,2.54e-32,64;UBERON:0007284,2.54e-32,64;UBERON:0000073,4.72e-32,54;UBERON:0001049,4.59e-30,52;UBERON:0005068,4.59e-30,52;UBERON:0006241,4.59e-30,52;UBERON:0007135,4.59e-30,52;UBERON:0001017,6.91e-28,73;UBERON:0001016,1.32e-26,75;UBERON:0000955,4.38e-26,47;UBERON:0006238,4.38e-26,47;UBERON:0010371,6.90e-26,73;UBERON:0002616,4.31e-25,46;UBERON:0003056,7.74e-25,49;UBERON:0004121,1.58e-24,95;UBERON:0000924,1.58e-24,95;UBERON:0006601,1.58e-24,95;UBERON:0003080,1.80e-21,40;UBERON:0010314,3.10e-21,92;UBERON:0002780,1.90e-20,39;UBERON:0001890,1.90e-20,39;UBERON:0006240,1.90e-20,39;UBERON:0002020,2.86e-18,34;UBERON:0003528,1.06e-14,29;UBERON:0002791,1.06e-14,29;UBERON:0001893,1.06e-14,29;UBERON:0000956,4.94e-09,21;UBERON:0001869,4.94e-09,21;UBERON:0000203,4.94e-09,21;UBERON:0002021,5.46e-09,10;UBERON:0000411,5.46e-09,10;UBERON:0001950,5.46e-09,10;UBERON:0003076,5.61e-09,12;UBERON:0003057,5.61e-09,12;UBERON:0002619,3.25e-08,17;UBERON:0002420,2.66e-07,8;UBERON:0007245,2.66e-07,8;UBERON:0010009,2.66e-07,8;UBERON:0010011,2.66e-07,8;UBERON:0000454,2.66e-07,8;UBERON:0001894,9.65e-07,10;UBERON:0006222,9.65e-07,10
|phase1_expression=0.960893082628764,5.23463111459042,5.0049916332849,1.20985684522732,4.50806156951712,4.19698179779725,3.03696432774183,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,2.55129870453209,0,0,1.59992422793407,1.37645568640302,2.29692785646008,2.15380998079537,1.07735616342945,0.570070258369122,1.51218077855958,1.33038306393183,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.194429899074283,0,0,0,0,0,0,0,0,4.45096213891115,4.23192783417626,0,0,0,0,0,0,0,1.92109152660777,1.65903379693564,1.21505344498522,0.420649922702764,1.99955689082663,2.42955395046775,1.83736198822431,1.62937300731002,0.919218786610021,4.40463523997555,5.61824287574826,4.76180253094355,4.2203612073662,3.20206752608434,3.64639359389732,3.62937898701795,1.68828783009504,5.34793867218835,4.71405736757868,2.70506193518296,4.28718725398191,0.454357159999104,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0.91347103775248,0,2.82040064223167,1.04091196059682,0.913396434936424,0.461230994512117,1.80867168663147,2.4693628498498,1.63366568728578,0.494389935468748,0,0,0,0.220841518460394,0,0,7.31951992528868,8.16842156572475,0.510914110417183,0,0,0,6.29120685500255,4.57500602818627,2.38743269014442,4.51943232499919,3.06858548796397,5.81806524766768,4.38051410282946,0.305518091550949,0.124406970610093,1.26361379216837,4.20883711772948,0.910843100738926,0.689706313300419,1.26043490863744,1.80845781402858,2.99360596265843,3.71529788826064,3.27956035959051,5.17406741478031,0,0,0,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.94405927989778,1.85228302282712,1.32167513193519,0.264450566663544,0,0.232236671860439,0.515469845288373,0.403367049246685,0.667134131534611,0.570676878337677,0,0.329397909448022,0,0.596869416123452,0.19496408711912,3.59527763461689,0.864552199498777,0.995706366271836,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0.442655759869801,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0.449724224769707,0.202860121388503,0.241177159752417,0,0.863088412352432,0.324270453550071,0.549122826376163,2.87536413054709,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0.554259570499814,0,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,4.65596710964597,5.62616095642575,0,0,0.631016438832513,0.780877488593277,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,5.14114106274891,1.13552068166615,0,0.488660878060728,0.329940245945071,0,0.971122544619926,0.604647113929502,0,0.885905678642318,1.53717573971964,1.29214146584111,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,0,11.5749465956288,1.44048875225048,0.517434735131018,1.92903331528433,3.72414490648775,1.96205699362278,4.11372551505302,2.43571959291679,0,0.63549621259146,0.220528398054962,0,0,0.120625849856312,0.358117032009409,0.328281799490123,0.291480836629851,5.56275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.972048067396211,1.04544148007234,0,0.404593039154462,0.330613822901344,0,0,0,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0.387479470433193,0.506868376472335,0,0.39061315453185,0.419437377702843,1.93267296660805,2.01621004380506,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.549454872801795,0.214368379079066,0,7.34177395402186,3.22227665555024,4.01026859407578,2.57779773515531,6.16574267793578,3.0215755895588,2.70009000092722,4.5032120322422,2.71885445390523,2.5888015587591,0.518936737920883,0.798049746802062,0.341467211508268,1.21553358534147,1.04806581313991,1.10306105070008,0.222246727801615,0.412070114477788,1.28367683836726,1.26348605881899,0.25347929989024,1.50901073108861,0.655490552289177,1.28050304809739,1.60819313075717,1.90517476513229,0.811190281613988,1.15745532278223,0.824171801606613,1.47198920134397,0.342869252385415,0.887379030796687,0.715308569841963,1.30811774969096,0.376437521661322,1.18460451048347,0.548783918618318,0.789209134313529,1.22223702461276,0.561142271657738,1.30498519936592,0.985044823755635,0.818462086339379,0.464810523557898,1.15743966588685,1.99848462350357,0.467863216890817,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843
|phase1_expression=0.960893082628764,5.23463111459042,5.0049916332849,1.20985684522732,4.50806156951712,4.19698179779725,3.03696432774183,0,0,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0,0,0,2.55129870453209,0,0,1.59992422793407,1.37645568640302,2.29692785646008,2.15380998079537,1.07735616342945,0.570070258369122,1.51218077855958,1.33038306393183,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0.194429899074283,0,0,0,0,0,0,0,0,4.45096213891115,4.23192783417626,0,0,0,0,0,0,0,1.92109152660777,1.65903379693564,1.21505344498522,0.420649922702764,1.99955689082663,2.42955395046775,1.83736198822431,1.62937300731002,0.919218786610021,4.40463523997555,5.61824287574826,4.76180253094355,4.2203612073662,3.20206752608434,3.64639359389732,3.62937898701795,1.68828783009504,5.34793867218835,4.71405736757868,2.70506193518296,4.28718725398191,0.454357159999104,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0,0.91347103775248,0,2.82040064223167,1.04091196059682,0.913396434936424,0.461230994512117,1.80867168663147,2.4693628498498,1.63366568728578,0.494389935468748,0,0,0,0.220841518460394,0,0,7.31951992528868,8.16842156572475,0.510914110417183,0,0,0,6.29120685500255,4.57500602818627,2.38743269014442,4.51943232499919,3.06858548796397,5.81806524766768,4.38051410282946,0.305518091550949,0.124406970610093,1.26361379216837,4.20883711772948,0.910843100738926,0.689706313300419,1.26043490863744,1.80845781402858,2.99360596265843,3.71529788826064,3.27956035959051,5.17406741478031,0,0,0,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,2.94405927989778,1.85228302282712,1.32167513193519,0.264450566663544,0,0.232236671860439,0.515469845288373,0.403367049246685,0.667134131534611,0.570676878337677,0,0.329397909448022,0,0.596869416123452,0.19496408711912,3.59527763461689,0.864552199498777,0.995706366271836,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0.442655759869801,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0.449724224769707,0.202860121388503,0.241177159752417,0,0.863088412352432,0.324270453550071,0.549122826376163,2.87536413054709,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0.554259570499814,0,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0,4.65596710964597,5.62616095642575,0,0,0.631016438832513,0.780877488593277,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,5.14114106274891,1.13552068166615,0,0.488660878060728,0.329940245945071,0,0.971122544619926,0.604647113929502,0,0.885905678642318,1.53717573971964,1.29214146584111,1.45413491791002,1.06949213515416,0.316036757935816,1.05418608574999,0,11.5749465956288,1.44048875225048,0.517434735131018,1.92903331528433,3.72414490648775,1.96205699362278,4.11372551505302,2.43571959291679,0,0.63549621259146,0.220528398054962,0,0,0.120625849856312,0.358117032009409,0.328281799490123,0.291480836629851,5.56275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.972048067396211,1.04544148007234,0,0.404593039154462,0.330613822901344,0,0,0,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0.387479470433193,0.506868376472335,0,0.39061315453185,0.419437377702843,1.93267296660805,2.01621004380506,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.549454872801795,0.214368379079066,0,7.34177395402186,3.22227665555024,4.01026859407578,2.57779773515531,6.16574267793578,3.0215755895588,2.70009000092722,4.5032120322422,2.71885445390523,2.5888015587591,0.518936737920883,0.798049746802062,0.341467211508268,1.21553358534147,1.04806581313991,1.10306105070008,0.222246727801615,0.412070114477788,1.28367683836726,1.26348605881899,0.25347929989024,1.50901073108861,0.655490552289177,1.28050304809739,1.60819313075717,1.90517476513229,0.811190281613988,1.15745532278223,0.824171801606613,1.47198920134397,0.342869252385415,0.887379030796687,0.715308569841963,1.30811774969096,0.376437521661322,1.18460451048347,0.548783918618318,0.789209134313529,1.22223702461276,0.561142271657738,1.30498519936592,0.985044823755635,0.818462086339379,0.464810523557898,1.15743966588685,1.99848462350357,0.467863216890817,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843
|short_description=p3@Rims2
}}
}}

Latest revision as of 18:42, 26 September 2015

Short description:p3@Rims2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rims2_5end
Coexpression cluster:NA
Association with transcript: -256bp_to_ENSMUST00000082054, ENSMUST00000110312, ENSMUST00000167407, NM_053271, uc007vod.1, uc007voe.1, uc011zsk.1_5end
EntrezGene:Rims2
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Rims2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.53e-1223
neuroblast (sensu Vertebrata)2.53e-1223
neuron5.55e-0833
neuronal stem cell5.55e-0833
neuroblast5.55e-0833
electrically signaling cell5.55e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm2.54e-3264
neural plate2.54e-3264
presumptive neural plate2.54e-3264
regional part of nervous system4.72e-3254
neural tube4.59e-3052
neural rod4.59e-3052
future spinal cord4.59e-3052
neural keel4.59e-3052
central nervous system6.91e-2873
nervous system1.32e-2675
brain4.38e-2647
future brain4.38e-2647
ecto-epithelium6.90e-2673
regional part of brain4.31e-2546
pre-chordal neural plate7.74e-2549
ectoderm-derived structure1.58e-2495
ectoderm1.58e-2495
presumptive ectoderm1.58e-2495
anterior neural tube1.80e-2140
structure with developmental contribution from neural crest3.10e-2192
regional part of forebrain1.90e-2039
forebrain1.90e-2039
future forebrain1.90e-2039
gray matter2.86e-1834
brain grey matter1.06e-1429
regional part of telencephalon1.06e-1429
telencephalon1.06e-1429
cerebral cortex4.94e-0921
cerebral hemisphere4.94e-0921
pallium4.94e-0921
occipital lobe5.46e-0910
visual cortex5.46e-0910
neocortex5.46e-0910
posterior neural tube5.61e-0912
chordal neural plate5.61e-0912
regional part of cerebral cortex3.25e-0817
basal ganglion2.66e-078
nuclear complex of neuraxis2.66e-078
aggregate regional part of brain2.66e-078
collection of basal ganglia2.66e-078
cerebral subcortex2.66e-078
diencephalon9.65e-0710
future diencephalon9.65e-0710
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