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FFCP PHASE1:Mm9::chr15:39029653..39029669,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:39029653..39029669,+
|DHSsupport=NA
|short_description=p5@Rims2
|DPIdataset=NA
|description=CAGE_peak_5_at_Rims2_5end
|association_with_transcript=-208bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end
|EntrezGene=116838
|EntrezGene=116838
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81
|UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81
|association_with_transcript=-208bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end
|cluster_id=chr15:39029653..39029669,+
|description=CAGE_peak_5_at_Rims2_5end
|id=chr15:39029653..39029669,+
|ontology_enrichment_celltype=CL:0000540!7.38e-12!33;CL:0000047!7.38e-12!33;CL:0000031!7.38e-12!33;CL:0000404!7.38e-12!33;CL:0000117!1.47e-11!23;CL:0000337!1.47e-11!23;CL:0000393!6.80e-08!39;CL:0000211!6.80e-08!39;CL:0000221!1.29e-07!44;CL:0000133!1.29e-07!44;CL:0002319!2.56e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.98e-16,23;CL:0000337,2.98e-16,23;CL:0000540,2.80e-13,33;CL:0000047,2.80e-13,33;CL:0000031,2.80e-13,33;CL:0000404,2.80e-13,33;CL:0000393,3.00e-10,39;CL:0000211,3.00e-10,39;CL:0000221,3.31e-09,44;CL:0000133,3.31e-09,44;CL:0002319,1.01e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.52e-30!71;UBERON:0003075!3.52e-30!71;UBERON:0007284!3.52e-30!71;UBERON:0000033!1.29e-27!63;UBERON:0001017!2.36e-26!73;UBERON:0005743!2.36e-26!73;UBERON:0004121!2.70e-26!102;UBERON:0000924!2.70e-26!102;UBERON:0006601!2.70e-26!102;UBERON:0000073!3.33e-25!75;UBERON:0001016!3.33e-25!75;UBERON:0001049!8.45e-25!52;UBERON:0005068!8.45e-25!52;UBERON:0006241!8.45e-25!52;UBERON:0007135!8.45e-25!52;UBERON:0000955!3.32e-24!50;UBERON:0006238!3.32e-24!50;UBERON:0003056!7.02e-24!49;UBERON:0002616!2.27e-23!49;UBERON:0003080!1.28e-19!40;UBERON:0002780!6.05e-19!39;UBERON:0001890!6.05e-19!39;UBERON:0006240!6.05e-19!39;UBERON:0002020!5.15e-17!34;UBERON:0002791!2.62e-14!29;UBERON:0003528!2.62e-14!29;UBERON:0001893!2.62e-14!29;UBERON:0007811!3.45e-12!86;UBERON:0000956!4.33e-10!21;UBERON:0001869!4.33e-10!21;UBERON:0000203!4.33e-10!21;UBERON:0000153!2.42e-09!94;UBERON:0002619!6.75e-09!17;UBERON:0002021!5.99e-08!10;UBERON:0000411!5.99e-08!10;UBERON:0001950!5.99e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.57e-41,54;UBERON:0002346,8.43e-41,64;UBERON:0003075,8.43e-41,64;UBERON:0007284,8.43e-41,64;UBERON:0001017,1.80e-39,73;UBERON:0001049,2.62e-38,52;UBERON:0005068,2.62e-38,52;UBERON:0006241,2.62e-38,52;UBERON:0007135,2.62e-38,52;UBERON:0004121,4.49e-38,95;UBERON:0000924,4.49e-38,95;UBERON:0006601,4.49e-38,95;UBERON:0001016,5.42e-38,75;UBERON:0010371,7.12e-37,73;UBERON:0003056,5.60e-34,49;UBERON:0000955,1.41e-33,47;UBERON:0006238,1.41e-33,47;UBERON:0002616,3.88e-32,46;UBERON:0003080,3.86e-29,40;UBERON:0010314,1.37e-28,92;UBERON:0002780,6.04e-28,39;UBERON:0001890,6.04e-28,39;UBERON:0006240,6.04e-28,39;UBERON:0002020,6.43e-26,34;UBERON:0003528,4.83e-21,29;UBERON:0002791,4.83e-21,29;UBERON:0001893,4.83e-21,29;UBERON:0002619,7.36e-15,17;UBERON:0000956,1.43e-14,21;UBERON:0001869,1.43e-14,21;UBERON:0000203,1.43e-14,21;UBERON:0002021,2.56e-13,10;UBERON:0000411,2.56e-13,10;UBERON:0001950,2.56e-13,10;UBERON:0000025,2.23e-10,114;UBERON:0004111,3.75e-10,122;UBERON:0003076,3.53e-09,12;UBERON:0003057,3.53e-09,12;UBERON:0000483,1.59e-08,174;UBERON:0000119,2.90e-08,176;UBERON:0011216,6.77e-08,194;UBERON:0001894,1.14e-07,10;UBERON:0006222,1.14e-07,10;UBERON:0002420,1.14e-07,8;UBERON:0007245,1.14e-07,8;UBERON:0010009,1.14e-07,8;UBERON:0010011,1.14e-07,8;UBERON:0000454,1.14e-07,8;UBERON:0000369,5.09e-07,5;UBERON:0002435,5.09e-07,5;UBERON:0000204,5.09e-07,5;UBERON:0010082,5.09e-07,5;UBERON:0002240,7.17e-07,6;UBERON:0005174,7.17e-07,6;UBERON:0001137,7.17e-07,6
|phase1_expression=1.44133962394315,0.697950815278722,1.36499771816861,0.90739263392049,0.500895729946347,2.35030980676646,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.639969691173627,0,1.14846392823004,1.29228598847722,0.646413698057667,0.760093677825496,0.756090389279792,1.10865255327652,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,0.630974884054146,1.71390590642282,1.32521124570968,1.22490799214954,1.34183659425531,3.67687514644008,4.40463523997555,3.57524546638526,1.99688493233117,3.03338461779446,1.9212405156506,2.6045668527838,3.62937898701795,0.56276261003168,1.83357897332172,2.65165726926301,2.56269025438385,4.10078780815661,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0,0,0.45673551887624,0,1.63286352971307,0.520455980298408,0.913396434936424,0.461230994512117,0.904335843315735,1.41106448562846,0.502666365318702,0.741584903203122,0,0,0,0,0,0,5.85561594023094,5.44561437714983,0.255457055208591,0,0,0,3.59497534571574,5.94750783664214,4.39790232395025,3.65031072403781,2.55715457330331,3.74018480207208,4.05603157669394,0.101839363850316,0.124406970610093,0.758168275301024,1.26265113531884,0.650602214813519,0.919608417733892,1.44049703844279,1.50704817835715,2.99360596265843,2.43416068541215,2.52994656311268,3.10444044886819,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,1.13195073617213,0.330418782983798,0,0.213288250535234,0.232236671860439,0.257734922644187,1.00841762311671,0,0,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0.252946148497029,0,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,2.56880943980467,3.04750385139728,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0.566153061577665,0.809621403349789,1.46127928955656,1.97643888973262,10.2822821254978,0.567760340833074,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,1.78248689192361,0.316036757935816,0,0,9.87274856685985,0.36012218806262,0.258717367565509,1.71469628025274,3.54680467284547,3.56737635204141,4.11372551505302,1.2178597964584,0.23467170806371,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0.129614973291793,0,2.81846469342095,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0,6.7770221114048,5.06357760157895,5.15605962095457,4.29632955859219,4.11049511862385,3.0215755895588,2.02506750069542,4.5032120322422,2.71885445390523,3.10656187051092,0.62272408550506,1.19707462020309,0.512200817262403,0.972426868273176,0,0.551530525350042,0.888986911206461,0.618105171716683,1.60459604795908,0.758091635291392,0.50695859978048,0.943131706930381,0.936415074698824,0.704276676453562,0.631790158511746,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,1.1921809497366,0.436039249896986,0.470546902076653,0.676916863133412,0.548783918618318,0.263069711437843,0.814824683075171,0,0.830445126869219,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0.644613162144895,0.191288332068843,0,0
|phase1_expression=1.44133962394315,0.697950815278722,1.36499771816861,0.90739263392049,0.500895729946347,2.35030980676646,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.639969691173627,0,1.14846392823004,1.29228598847722,0.646413698057667,0.760093677825496,0.756090389279792,1.10865255327652,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.388859798148567,0,0,0,0,0,0,0,0,1.82084814773638,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,0.630974884054146,1.71390590642282,1.32521124570968,1.22490799214954,1.34183659425531,3.67687514644008,4.40463523997555,3.57524546638526,1.99688493233117,3.03338461779446,1.9212405156506,2.6045668527838,3.62937898701795,0.56276261003168,1.83357897332172,2.65165726926301,2.56269025438385,4.10078780815661,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0,0,0.45673551887624,0,1.63286352971307,0.520455980298408,0.913396434936424,0.461230994512117,0.904335843315735,1.41106448562846,0.502666365318702,0.741584903203122,0,0,0,0,0,0,5.85561594023094,5.44561437714983,0.255457055208591,0,0,0,3.59497534571574,5.94750783664214,4.39790232395025,3.65031072403781,2.55715457330331,3.74018480207208,4.05603157669394,0.101839363850316,0.124406970610093,0.758168275301024,1.26265113531884,0.650602214813519,0.919608417733892,1.44049703844279,1.50704817835715,2.99360596265843,2.43416068541215,2.52994656311268,3.10444044886819,0,0,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,1.13195073617213,0.330418782983798,0,0.213288250535234,0.232236671860439,0.257734922644187,1.00841762311671,0,0,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0.252946148497029,0,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,2.56880943980467,3.04750385139728,0,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.445597348164788,0.566153061577665,0.809621403349789,1.46127928955656,1.97643888973262,10.2822821254978,0.567760340833074,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,1.78248689192361,0.316036757935816,0,0,9.87274856685985,0.36012218806262,0.258717367565509,1.71469628025274,3.54680467284547,3.56737635204141,4.11372551505302,1.2178597964584,0.23467170806371,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0,0.539457385539283,0.247960367176008,0.26175594198403,0.129614973291793,0,2.81846469342095,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0,6.7770221114048,5.06357760157895,5.15605962095457,4.29632955859219,4.11049511862385,3.0215755895588,2.02506750069542,4.5032120322422,2.71885445390523,3.10656187051092,0.62272408550506,1.19707462020309,0.512200817262403,0.972426868273176,0,0.551530525350042,0.888986911206461,0.618105171716683,1.60459604795908,0.758091635291392,0.50695859978048,0.943131706930381,0.936415074698824,0.704276676453562,0.631790158511746,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,1.1921809497366,0.436039249896986,0.470546902076653,0.676916863133412,0.548783918618318,0.263069711437843,0.814824683075171,0,0.830445126869219,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,0.467863216890817,0.644613162144895,0.191288332068843,0,0
|short_description=p5@Rims2
}}
}}

Latest revision as of 18:42, 26 September 2015

Short description:p5@Rims2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Rims2_5end
Coexpression cluster:NA
Association with transcript: -208bp_to_ENSMUST00000082054, ENSMUST00000110312, ENSMUST00000167407, NM_053271, uc007vod.1, uc007voe.1, uc011zsk.1_5end
EntrezGene:Rims2
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Rims2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F14.40
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.98e-1623
neuroblast (sensu Vertebrata)2.98e-1623
neuron2.80e-1333
neuronal stem cell2.80e-1333
neuroblast2.80e-1333
electrically signaling cell2.80e-1333
electrically responsive cell3.00e-1039
electrically active cell3.00e-1039
ectodermal cell3.31e-0944
neurectodermal cell3.31e-0944
neural cell1.01e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.57e-4154
neurectoderm8.43e-4164
neural plate8.43e-4164
presumptive neural plate8.43e-4164
central nervous system1.80e-3973
neural tube2.62e-3852
neural rod2.62e-3852
future spinal cord2.62e-3852
neural keel2.62e-3852
ectoderm-derived structure4.49e-3895
ectoderm4.49e-3895
presumptive ectoderm4.49e-3895
nervous system5.42e-3875
ecto-epithelium7.12e-3773
pre-chordal neural plate5.60e-3449
brain1.41e-3347
future brain1.41e-3347
regional part of brain3.88e-3246
anterior neural tube3.86e-2940
structure with developmental contribution from neural crest1.37e-2892
regional part of forebrain6.04e-2839
forebrain6.04e-2839
future forebrain6.04e-2839
gray matter6.43e-2634
brain grey matter4.83e-2129
regional part of telencephalon4.83e-2129
telencephalon4.83e-2129
regional part of cerebral cortex7.36e-1517
cerebral cortex1.43e-1421
cerebral hemisphere1.43e-1421
pallium1.43e-1421
occipital lobe2.56e-1310
visual cortex2.56e-1310
neocortex2.56e-1310
tube2.23e-10114
anatomical conduit3.75e-10122
posterior neural tube3.53e-0912
chordal neural plate3.53e-0912
epithelium1.59e-08174
cell layer2.90e-08176
organ system subdivision6.77e-08194
diencephalon1.14e-0710
future diencephalon1.14e-0710
basal ganglion1.14e-078
nuclear complex of neuraxis1.14e-078
aggregate regional part of brain1.14e-078
collection of basal ganglia1.14e-078
cerebral subcortex1.14e-078
corpus striatum5.09e-075
striatum5.09e-075
ventral part of telencephalon5.09e-075
future corpus striatum5.09e-075
spinal cord7.17e-076
dorsal region element7.17e-076
dorsum7.17e-076
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