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FFCP PHASE1:Mm9::chr7:51684160..51684186,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:51684160..51684186,+
|DHSsupport=NA
|short_description=p5@Lrrc4b
|DPIdataset=NA
|description=CAGE_peak_5_at_Lrrc4b_5end
|association_with_transcript=-201bp_to_ENSMUST00000127790_5end
|EntrezGene=272381
|EntrezGene=272381
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=D3YZP3
|UniProt=D3YZP3
|association_with_transcript=-201bp_to_ENSMUST00000127790_5end
|cluster_id=chr7:51684160..51684186,+
|description=CAGE_peak_5_at_Lrrc4b_5end
|id=chr7:51684160..51684186,+
|ontology_enrichment_celltype=CL:0000117!1.26e-14!23;CL:0000337!1.26e-14!23;CL:0000540!1.70e-12!33;CL:0000047!1.70e-12!33;CL:0000031!1.70e-12!33;CL:0000404!1.70e-12!33;CL:0002319!1.03e-11!43;CL:0000221!1.12e-11!44;CL:0000133!1.12e-11!44;CL:0000393!2.57e-08!39;CL:0000211!2.57e-08!39;CL:0000055!8.96e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-20,23;CL:0000337,1.29e-20,23;CL:0000540,1.03e-12,33;CL:0000047,1.03e-12,33;CL:0000031,1.03e-12,33;CL:0000404,1.03e-12,33;CL:0002319,1.58e-11,43;CL:0000221,4.73e-11,44;CL:0000133,4.73e-11,44;CL:0000393,1.71e-09,39;CL:0000211,1.71e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.45e-32!73;UBERON:0005743!6.45e-32!73;UBERON:0000073!1.52e-30!75;UBERON:0001016!1.52e-30!75;UBERON:0002346!3.61e-29!71;UBERON:0003075!3.61e-29!71;UBERON:0007284!3.61e-29!71;UBERON:0001049!1.69e-28!52;UBERON:0005068!1.69e-28!52;UBERON:0006241!1.69e-28!52;UBERON:0007135!1.69e-28!52;UBERON:0000033!9.14e-28!63;UBERON:0000955!3.81e-27!50;UBERON:0006238!3.81e-27!50;UBERON:0004121!5.57e-27!102;UBERON:0000924!5.57e-27!102;UBERON:0006601!5.57e-27!102;UBERON:0002616!2.69e-26!49;UBERON:0003056!5.94e-25!49;UBERON:0003080!3.96e-22!40;UBERON:0002780!2.37e-21!39;UBERON:0001890!2.37e-21!39;UBERON:0006240!2.37e-21!39;UBERON:0002020!2.45e-20!34;UBERON:0002791!4.26e-17!29;UBERON:0003528!4.26e-17!29;UBERON:0001893!4.26e-17!29;UBERON:0000153!9.17e-15!94;UBERON:0007811!1.92e-13!86;UBERON:0000956!6.65e-12!21;UBERON:0001869!6.65e-12!21;UBERON:0000203!6.65e-12!21;UBERON:0002619!9.99e-10!17;UBERON:0000468!5.24e-07!333;UBERON:0003076!7.75e-07!12;UBERON:0003057!7.75e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.61e-42,54;UBERON:0001049,3.15e-40,52;UBERON:0005068,3.15e-40,52;UBERON:0006241,3.15e-40,52;UBERON:0007135,3.15e-40,52;UBERON:0002346,1.24e-39,64;UBERON:0003075,1.24e-39,64;UBERON:0007284,1.24e-39,64;UBERON:0001017,1.05e-38,73;UBERON:0001016,4.34e-37,75;UBERON:0000955,2.52e-35,47;UBERON:0006238,2.52e-35,47;UBERON:0002616,4.14e-34,46;UBERON:0004121,5.19e-33,95;UBERON:0000924,5.19e-33,95;UBERON:0006601,5.19e-33,95;UBERON:0003056,1.71e-32,49;UBERON:0010371,3.42e-32,73;UBERON:0003080,2.07e-30,40;UBERON:0002780,2.77e-29,39;UBERON:0001890,2.77e-29,39;UBERON:0006240,2.77e-29,39;UBERON:0002020,9.25e-28,34;UBERON:0003528,4.77e-23,29;UBERON:0002791,4.77e-23,29;UBERON:0001893,4.77e-23,29;UBERON:0010314,3.21e-22,92;UBERON:0000956,1.58e-15,21;UBERON:0001869,1.58e-15,21;UBERON:0000203,1.58e-15,21;UBERON:0002619,2.23e-12,17;UBERON:0003076,9.89e-10,12;UBERON:0003057,9.89e-10,12;UBERON:0000025,1.59e-09,114;UBERON:0002420,1.00e-08,8;UBERON:0007245,1.00e-08,8;UBERON:0010009,1.00e-08,8;UBERON:0010011,1.00e-08,8;UBERON:0000454,1.00e-08,8;UBERON:0002021,1.43e-08,10;UBERON:0000411,1.43e-08,10;UBERON:0001950,1.43e-08,10;UBERON:0004111,6.43e-08,122;UBERON:0001894,4.58e-07,10;UBERON:0006222,4.58e-07,10;UBERON:0002240,9.67e-07,6;UBERON:0005174,9.67e-07,6;UBERON:0001137,9.67e-07,6
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.5378032791413,0.777719596297134,0.839918529752175,0,0,0,0,0,0,0,3.64169629547276,4.23192783417626,4.43681982454325,0.338844532069132,0,0,0,0,1.49800055259202,2.68952813725088,3.00699875694585,3.91517221161903,2.52389953621658,4.85606673486466,3.3130281142742,3.1847607795888,3.35459148563827,3.67687514644008,3.30347642998166,4.46905683298157,4.14737639791857,6.3305418110493,6.49562269577109,3.12548022334056,3.07101298901519,3.93933827022176,4.43114918552749,5.59794312399969,3.27454865837937,6.33758115806022,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,1.04091196059682,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.485300549842228,0.220841518460394,0,0,8.19786231632332,3.35114730901528,0,0,0,0,6.89036941262184,7.32000964509802,9.80103946480342,5.9100268865374,5.62574006126727,5.194701113989,6.48965052271031,0.611036183101898,0.124406970610093,0.252722758433675,0.631325567659422,1.82168620147785,0.689706313300419,1.0803727788321,1.50704817835715,1.7009124787832,2.8185018462667,2.90475346135159,1.29351685369508,1.07783996466421,1.51284864134255,1.58356011747554,2.19195732427575,0.834141747676794,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0,0.710234206755631,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.268412837520744,10.5144974282064,8.12946437796347,0,0,0.426576501070468,0.464473343720877,1.15980715189884,1.21010114774006,0,0.951128130562796,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.913988100877831,0,0.814605311381257,0.387904974335251,0.350679099451593,0.252946148497029,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,1.35796068620151,0.704070744865506,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0.433947175744535,0,0,0,0.275936746304732,6.42202359951168,4.21962071731931,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,0.222798674082394,1.13230612315533,0.809621403349789,0.876767573733936,0.395287777946524,9.96096080907602,0.425820255624806,1.6025904330053,1.30309567482861,0.494910368917606,0,0,0.906970670894253,0.188605079755898,1.47650946440386,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,1.62054984628179,1.68166288917581,1.28602221018955,2.12808280370728,1.24858172321449,1.48094118541909,3.04464949114599,0,0,0,0,0,0,0,0.328281799490123,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.972048067396211,0.627264888043406,0.436725127492355,0.539457385539283,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0,0.675824501963113,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0,0.405450430580328,0.410843828659309,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.665957860122194,0,0,0.579568782096571,0.375364950902364,1.09890974560359,0.643105137237198,0.501572104035363,7.90652579663893,3.22227665555024,6.30185064783336,3.60891682921744,1.37016503954128,1.5107877947794,4.72515750162264,2.70192721934532,1.35942722695261,4.14208249401456,0.31136204275253,1.19707462020309,1.36586884603307,1.21553358534147,1.46729213839588,0.919217542250071,1.55572709461131,1.03017528619447,0.962757628775446,1.76888048234658,1.01391719956096,1.88626341386076,0.749132059759059,1.53660365771686,1.26358031702349,1.42888107384922,1.50649623728312,0.77163688185482,0.824171801606613,2.06078488188156,0,1.24233064311536,1.1921809497366,0.436039249896986,1.41164070622996,1.18460451048347,1.09756783723664,1.05227884575137,1.90125759384206,0,1.54225523561426,0.985044823755635,1.22769312950907,1.08455788830176,0.385813221962283,3.74715866906919,1.16965804222704,0.859484216193193,0.765153328275374,1.10295709559758,0.463735671240843
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.5378032791413,0.777719596297134,0.839918529752175,0,0,0,0,0,0,0,3.64169629547276,4.23192783417626,4.43681982454325,0.338844532069132,0,0,0,0,1.49800055259202,2.68952813725088,3.00699875694585,3.91517221161903,2.52389953621658,4.85606673486466,3.3130281142742,3.1847607795888,3.35459148563827,3.67687514644008,3.30347642998166,4.46905683298157,4.14737639791857,6.3305418110493,6.49562269577109,3.12548022334056,3.07101298901519,3.93933827022176,4.43114918552749,5.59794312399969,3.27454865837937,6.33758115806022,0,0.0755715601067855,0,0,0,0.539703191637817,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,1.04091196059682,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.485300549842228,0.220841518460394,0,0,8.19786231632332,3.35114730901528,0,0,0,0,6.89036941262184,7.32000964509802,9.80103946480342,5.9100268865374,5.62574006126727,5.194701113989,6.48965052271031,0.611036183101898,0.124406970610093,0.252722758433675,0.631325567659422,1.82168620147785,0.689706313300419,1.0803727788321,1.50704817835715,1.7009124787832,2.8185018462667,2.90475346135159,1.29351685369508,1.07783996466421,1.51284864134255,1.58356011747554,2.19195732427575,0.834141747676794,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0.207125772535502,0,0,0.710234206755631,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.268412837520744,10.5144974282064,8.12946437796347,0,0,0.426576501070468,0.464473343720877,1.15980715189884,1.21010114774006,0,0.951128130562796,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.569003702859245,0.913988100877831,0,0.814605311381257,0.387904974335251,0.350679099451593,0.252946148497029,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,1.35796068620151,0.704070744865506,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0.433947175744535,0,0,0,0.275936746304732,6.42202359951168,4.21962071731931,0,0,0.315508219416257,0,0.861693590931196,0.238968797952552,0.222798674082394,1.13230612315533,0.809621403349789,0.876767573733936,0.395287777946524,9.96096080907602,0.425820255624806,1.6025904330053,1.30309567482861,0.494910368917606,0,0,0.906970670894253,0.188605079755898,1.47650946440386,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,1.62054984628179,1.68166288917581,1.28602221018955,2.12808280370728,1.24858172321449,1.48094118541909,3.04464949114599,0,0,0,0,0,0,0,0.328281799490123,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.972048067396211,0.627264888043406,0.436725127492355,0.539457385539283,0.330613822901344,0,0,0,0,0,0,0.194451188344048,0,0.675824501963113,0.352071715937262,0.2604087696879,0.209718688851422,0,0,0,0.405450430580328,0.410843828659309,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.665957860122194,0,0,0.579568782096571,0.375364950902364,1.09890974560359,0.643105137237198,0.501572104035363,7.90652579663893,3.22227665555024,6.30185064783336,3.60891682921744,1.37016503954128,1.5107877947794,4.72515750162264,2.70192721934532,1.35942722695261,4.14208249401456,0.31136204275253,1.19707462020309,1.36586884603307,1.21553358534147,1.46729213839588,0.919217542250071,1.55572709461131,1.03017528619447,0.962757628775446,1.76888048234658,1.01391719956096,1.88626341386076,0.749132059759059,1.53660365771686,1.26358031702349,1.42888107384922,1.50649623728312,0.77163688185482,0.824171801606613,2.06078488188156,0,1.24233064311536,1.1921809497366,0.436039249896986,1.41164070622996,1.18460451048347,1.09756783723664,1.05227884575137,1.90125759384206,0,1.54225523561426,0.985044823755635,1.22769312950907,1.08455788830176,0.385813221962283,3.74715866906919,1.16965804222704,0.859484216193193,0.765153328275374,1.10295709559758,0.463735671240843
|short_description=p5@Lrrc4b
}}
}}

Latest revision as of 19:12, 26 September 2015

Short description:p5@Lrrc4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lrrc4b_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -201bp_to_ENSMUST00000127790_5end
EntrezGene:Lrrc4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lrrc4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F19.80
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C26.42
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.29e-2023
neuroblast (sensu Vertebrata)1.29e-2023
neuron1.03e-1233
neuronal stem cell1.03e-1233
neuroblast1.03e-1233
electrically signaling cell1.03e-1233
neural cell1.58e-1143
ectodermal cell4.73e-1144
neurectodermal cell4.73e-1144
electrically responsive cell1.71e-0939
electrically active cell1.71e-0939

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.61e-4254
neural tube3.15e-4052
neural rod3.15e-4052
future spinal cord3.15e-4052
neural keel3.15e-4052
neurectoderm1.24e-3964
neural plate1.24e-3964
presumptive neural plate1.24e-3964
central nervous system1.05e-3873
nervous system4.34e-3775
brain2.52e-3547
future brain2.52e-3547
regional part of brain4.14e-3446
ectoderm-derived structure5.19e-3395
ectoderm5.19e-3395
presumptive ectoderm5.19e-3395
pre-chordal neural plate1.71e-3249
ecto-epithelium3.42e-3273
anterior neural tube2.07e-3040
regional part of forebrain2.77e-2939
forebrain2.77e-2939
future forebrain2.77e-2939
gray matter9.25e-2834
brain grey matter4.77e-2329
regional part of telencephalon4.77e-2329
telencephalon4.77e-2329
structure with developmental contribution from neural crest3.21e-2292
cerebral cortex1.58e-1521
cerebral hemisphere1.58e-1521
pallium1.58e-1521
regional part of cerebral cortex2.23e-1217
posterior neural tube9.89e-1012
chordal neural plate9.89e-1012
tube1.59e-09114
basal ganglion1.00e-088
nuclear complex of neuraxis1.00e-088
aggregate regional part of brain1.00e-088
collection of basal ganglia1.00e-088
cerebral subcortex1.00e-088
occipital lobe1.43e-0810
visual cortex1.43e-0810
neocortex1.43e-0810
anatomical conduit6.43e-08122
diencephalon4.58e-0710
future diencephalon4.58e-0710
spinal cord9.67e-076
dorsal region element9.67e-076
dorsum9.67e-076
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