FFCP PHASE1:Mm9::chr7:51697393..51697408,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=272381 | |EntrezGene=272381 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=P0C192 | |UniProt=P0C192 | ||
|association_with_transcript=-446bp_to_ENSMUST00000058667_5end | |association_with_transcript=-446bp_to_ENSMUST00000058667_5end | ||
|cluster_id=chr7:51697393..51697408,+ | |||
|description=CAGE_peak_2_at_Lrrc4b_5end | |description=CAGE_peak_2_at_Lrrc4b_5end | ||
|id=chr7:51697393..51697408,+ | |id=chr7:51697393..51697408,+ | ||
|ontology_enrichment_celltype=CL:0000540!9.07e-22!33;CL:0000047!9.07e-22!33;CL:0000031!9.07e-22!33;CL:0000404!9.07e-22!33;CL:0000221!1.57e-19!44;CL:0000133!1.57e-19!44;CL:0002319!3.89e-19!43;CL:0000117!1.61e-17!23;CL:0000337!1.61e-17!23;CL:0000393!4.71e-16!39;CL:0000211!4.71e-16!39;CL:0000055!4.88e-14!50 | |ontology_enrichment_celltype=CL:0000540!9.07e-22!33;CL:0000047!9.07e-22!33;CL:0000031!9.07e-22!33;CL:0000404!9.07e-22!33;CL:0000221!1.57e-19!44;CL:0000133!1.57e-19!44;CL:0002319!3.89e-19!43;CL:0000117!1.61e-17!23;CL:0000337!1.61e-17!23;CL:0000393!4.71e-16!39;CL:0000211!4.71e-16!39;CL:0000055!4.88e-14!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.71e-27,33;CL:0000047,1.71e-27,33;CL:0000031,1.71e-27,33;CL:0000404,1.71e-27,33;CL:0000221,1.45e-22,44;CL:0000133,1.45e-22,44;CL:0002319,4.61e-22,43;CL:0000117,4.93e-22,23;CL:0000337,4.93e-22,23;CL:0000393,5.31e-21,39;CL:0000211,5.31e-21,39;CL:0002321,7.43e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.39e-34!73;UBERON:0005743!7.39e-34!73;UBERON:0000073!1.51e-32!75;UBERON:0001016!1.51e-32!75;UBERON:0004121!5.10e-28!102;UBERON:0000924!5.10e-28!102;UBERON:0006601!5.10e-28!102;UBERON:0002346!2.18e-25!71;UBERON:0003075!2.18e-25!71;UBERON:0007284!2.18e-25!71;UBERON:0001049!7.01e-23!52;UBERON:0005068!7.01e-23!52;UBERON:0006241!7.01e-23!52;UBERON:0007135!7.01e-23!52;UBERON:0000033!5.02e-22!63;UBERON:0000955!2.24e-21!50;UBERON:0006238!2.24e-21!50;UBERON:0002616!8.14e-21!49;UBERON:0002020!9.97e-19!34;UBERON:0003056!4.83e-18!49;UBERON:0003080!1.41e-16!40;UBERON:0002780!4.47e-16!39;UBERON:0001890!4.47e-16!39;UBERON:0006240!4.47e-16!39;UBERON:0002791!3.38e-15!29;UBERON:0003528!3.38e-15!29;UBERON:0001893!3.38e-15!29;UBERON:0000025!2.31e-10!114;UBERON:0007811!3.20e-10!86;UBERON:0000956!8.89e-10!21;UBERON:0001869!8.89e-10!21;UBERON:0000203!8.89e-10!21;UBERON:0004111!2.79e-09!122;UBERON:0000153!2.16e-08!94;UBERON:0002619!1.72e-07!17;UBERON:0003076!5.53e-07!12;UBERON:0003057!5.53e-07!12;UBERON:0002420!6.72e-07!8;UBERON:0007245!6.72e-07!8;UBERON:0010009!6.72e-07!8;UBERON:0010011!6.72e-07!8;UBERON:0000454!6.72e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!7.39e-34!73;UBERON:0005743!7.39e-34!73;UBERON:0000073!1.51e-32!75;UBERON:0001016!1.51e-32!75;UBERON:0004121!5.10e-28!102;UBERON:0000924!5.10e-28!102;UBERON:0006601!5.10e-28!102;UBERON:0002346!2.18e-25!71;UBERON:0003075!2.18e-25!71;UBERON:0007284!2.18e-25!71;UBERON:0001049!7.01e-23!52;UBERON:0005068!7.01e-23!52;UBERON:0006241!7.01e-23!52;UBERON:0007135!7.01e-23!52;UBERON:0000033!5.02e-22!63;UBERON:0000955!2.24e-21!50;UBERON:0006238!2.24e-21!50;UBERON:0002616!8.14e-21!49;UBERON:0002020!9.97e-19!34;UBERON:0003056!4.83e-18!49;UBERON:0003080!1.41e-16!40;UBERON:0002780!4.47e-16!39;UBERON:0001890!4.47e-16!39;UBERON:0006240!4.47e-16!39;UBERON:0002791!3.38e-15!29;UBERON:0003528!3.38e-15!29;UBERON:0001893!3.38e-15!29;UBERON:0000025!2.31e-10!114;UBERON:0007811!3.20e-10!86;UBERON:0000956!8.89e-10!21;UBERON:0001869!8.89e-10!21;UBERON:0000203!8.89e-10!21;UBERON:0004111!2.79e-09!122;UBERON:0000153!2.16e-08!94;UBERON:0002619!1.72e-07!17;UBERON:0003076!5.53e-07!12;UBERON:0003057!5.53e-07!12;UBERON:0002420!6.72e-07!8;UBERON:0007245!6.72e-07!8;UBERON:0010009!6.72e-07!8;UBERON:0010011!6.72e-07!8;UBERON:0000454!6.72e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.33e-40,73;UBERON:0001016,4.26e-38,75;UBERON:0010314,5.94e-34,92;UBERON:0004121,1.07e-32,95;UBERON:0000924,1.07e-32,95;UBERON:0006601,1.07e-32,95;UBERON:0002346,5.97e-29,64;UBERON:0003075,5.97e-29,64;UBERON:0007284,5.97e-29,64;UBERON:0000073,1.60e-28,54;UBERON:0001049,1.67e-26,52;UBERON:0005068,1.67e-26,52;UBERON:0006241,1.67e-26,52;UBERON:0007135,1.67e-26,52;UBERON:0010371,5.75e-25,73;UBERON:0002020,4.28e-22,34;UBERON:0000955,7.62e-22,47;UBERON:0006238,7.62e-22,47;UBERON:0002616,3.69e-21,46;UBERON:0003056,6.02e-19,49;UBERON:0003080,2.70e-18,40;UBERON:0002780,1.15e-17,39;UBERON:0001890,1.15e-17,39;UBERON:0006240,1.15e-17,39;UBERON:0003528,1.26e-17,29;UBERON:0002791,1.26e-17,29;UBERON:0001893,1.26e-17,29;UBERON:0000025,1.96e-12,114;UBERON:0004111,1.60e-11,122;UBERON:0000956,8.03e-11,21;UBERON:0001869,8.03e-11,21;UBERON:0000203,8.03e-11,21;UBERON:0003076,7.80e-09,12;UBERON:0003057,7.80e-09,12;UBERON:0002420,2.06e-08,8;UBERON:0007245,2.06e-08,8;UBERON:0010009,2.06e-08,8;UBERON:0010011,2.06e-08,8;UBERON:0000454,2.06e-08,8;UBERON:0002619,5.61e-08,17 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0.878744730937887,0.388859798148567,0.55994568650145,0,0,0,0,0,0.286533439938757,0,17.1968991730658,14.2827564403449,24.719424736741,0,0,0,0,0,5.99200221036809,11.9107674649682,10.0578923939223,11.7455166348571,11.567872874326,14.568200204594,15.4607978666129,12.2490799214954,14.3768206527355,16.5459381589804,12.1127469099328,16.2162919368188,18.5863905240055,18.0684214190366,20.9506703849518,14.5855743755893,15.0758819460746,12.9435400307286,17.5717984943332,13.258286346315,12.386336229522,12.1159639786445,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,3.23939865486365,0,0,0,0,0,0,0.11418387971906,0,0,1.56136794089522,1.82679286987285,1.15307748628029,0.60289056221049,0.587943535678524,0.125666591329675,0,0,0,0,0,0,1.86391761218122,8.78342391034641,10.4723353406728,0,0,0,0,6.74057877321702,9.15001205637253,7.91622418311046,9.03886464999838,9.2057564638919,5.61027720310812,10.707923362472,0,0,0,0.420883711772948,1.17108398666433,0.459804208866946,1.80062129805349,2.10986744970001,1.83698547708585,1.5373646434182,2.43624483855295,1.55222022443409,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,2.89976081549703,2.57978665979206,3.6012412292203,4.26140524053378,4.9191057936851,5.707883176833,6.74348439776183,4.56064782379353,2.21854150497622,6.91151369636618,4.26835406605648,1.70244500046297,2.92399974850665,2.63460138349261,1.74468344388483,7.14985825118033,7.20332286654991,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.685491075658373,0,1.01825663922657,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,1.18821560042632,0.469380496577004,0.335012514883631,0.238043640886014,0,0.315270288212382,1.32878813789265,0.797273843287435,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,9.9541365792431,14.8858841972098,0,0.504941854408746,2.83957397474631,3.90438744296638,6.03185513651837,6.93009514062401,6.46116154838943,6.51076020814315,3.64329631507405,11.6902343164525,5.13874111330481,7.06906896127976,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0,0,0,0,2.34079422240703,1.81102157295856,1.71469628025274,0.354680467284547,0.891844088010353,1.48094118541909,1.522324745573,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0.291480836629851,12.0526446306831,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.86404272657441,0.627264888043406,0.655087691238533,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.39061315453185,0.314578033277133,0,0,0,0.810900861160657,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.34177395402186,6.90487854760765,4.58316410751517,7.56154002312225,7.53590771747707,0,7.42524750254986,4.5032120322422,6.34399372577886,7.24864436452548,1.24544817101012,3.59122386060928,2.73173769206615,0.972426868273176,1.46729213839588,1.83843508450014,1.77797382241292,0.824140228955577,0.962757628775446,1.51618327058278,2.5347929989024,1.69763707247469,1.49826411951812,1.34452820050225,1.78049953762401,0.952587382566147,1.27472758539341,1.54327376370964,2.06042950401653,1.17759136107518,2.05721551431249,1.77475806159337,1.66905332963125,1.16277133305863,2.1645157495526,0.930760686808441,1.28049581010941,1.31534855718921,2.17286582153379,0,2.01679530811096,1.57607171800902,2.04615521584845,1.54936841185966,1.54325288784913,3.49734809113124,1.16965804222704,1.07435527024149,0.57386499620653,0.220591419119515,0 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|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0.878744730937887,0.388859798148567,0.55994568650145,0,0,0,0,0,0.286533439938757,0,17.1968991730658,14.2827564403449,24.719424736741,0,0,0,0,0,5.99200221036809,11.9107674649682,10.0578923939223,11.7455166348571,11.567872874326,14.568200204594,15.4607978666129,12.2490799214954,14.3768206527355,16.5459381589804,12.1127469099328,16.2162919368188,18.5863905240055,18.0684214190366,20.9506703849518,14.5855743755893,15.0758819460746,12.9435400307286,17.5717984943332,13.258286346315,12.386336229522,12.1159639786445,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,3.23939865486365,0,0,0,0,0,0,0.11418387971906,0,0,1.56136794089522,1.82679286987285,1.15307748628029,0.60289056221049,0.587943535678524,0.125666591329675,0,0,0,0,0,0,1.86391761218122,8.78342391034641,10.4723353406728,0,0,0,0,6.74057877321702,9.15001205637253,7.91622418311046,9.03886464999838,9.2057564638919,5.61027720310812,10.707923362472,0,0,0,0.420883711772948,1.17108398666433,0.459804208866946,1.80062129805349,2.10986744970001,1.83698547708585,1.5373646434182,2.43624483855295,1.55222022443409,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,2.89976081549703,2.57978665979206,3.6012412292203,4.26140524053378,4.9191057936851,5.707883176833,6.74348439776183,4.56064782379353,2.21854150497622,6.91151369636618,4.26835406605648,1.70244500046297,2.92399974850665,2.63460138349261,1.74468344388483,7.14985825118033,7.20332286654991,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.685491075658373,0,1.01825663922657,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,1.18821560042632,0.469380496577004,0.335012514883631,0.238043640886014,0,0.315270288212382,1.32878813789265,0.797273843287435,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,9.9541365792431,14.8858841972098,0,0.504941854408746,2.83957397474631,3.90438744296638,6.03185513651837,6.93009514062401,6.46116154838943,6.51076020814315,3.64329631507405,11.6902343164525,5.13874111330481,7.06906896127976,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0,0,0,0,2.34079422240703,1.81102157295856,1.71469628025274,0.354680467284547,0.891844088010353,1.48094118541909,1.522324745573,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0.291480836629851,12.0526446306831,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.86404272657441,0.627264888043406,0.655087691238533,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.39061315453185,0.314578033277133,0,0,0,0.810900861160657,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.34177395402186,6.90487854760765,4.58316410751517,7.56154002312225,7.53590771747707,0,7.42524750254986,4.5032120322422,6.34399372577886,7.24864436452548,1.24544817101012,3.59122386060928,2.73173769206615,0.972426868273176,1.46729213839588,1.83843508450014,1.77797382241292,0.824140228955577,0.962757628775446,1.51618327058278,2.5347929989024,1.69763707247469,1.49826411951812,1.34452820050225,1.78049953762401,0.952587382566147,1.27472758539341,1.54327376370964,2.06042950401653,1.17759136107518,2.05721551431249,1.77475806159337,1.66905332963125,1.16277133305863,2.1645157495526,0.930760686808441,1.28049581010941,1.31534855718921,2.17286582153379,0,2.01679530811096,1.57607171800902,2.04615521584845,1.54936841185966,1.54325288784913,3.49734809113124,1.16965804222704,1.07435527024149,0.57386499620653,0.220591419119515,0 | ||
|short_description=p2@Lrrc4b | |short_description=p2@Lrrc4b | ||
}} | }} |
Latest revision as of 19:14, 26 September 2015
Short description: | p2@Lrrc4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrrc4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -446bp_to_ENSMUST00000058667_5end |
EntrezGene: | Lrrc4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.71e-27 | 33 |
neuronal stem cell | 1.71e-27 | 33 |
neuroblast | 1.71e-27 | 33 |
electrically signaling cell | 1.71e-27 | 33 |
ectodermal cell | 1.45e-22 | 44 |
neurectodermal cell | 1.45e-22 | 44 |
neural cell | 4.61e-22 | 43 |
CNS neuron (sensu Vertebrata) | 4.93e-22 | 23 |
neuroblast (sensu Vertebrata) | 4.93e-22 | 23 |
electrically responsive cell | 5.31e-21 | 39 |
electrically active cell | 5.31e-21 | 39 |
embryonic cell | 7.43e-09 | 70 |