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FFCP PHASE1:Mm9::chr7:51697393..51697408,+: Difference between revisions

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(Created page with "{{FFCP |id=chr7:51697393..51697408,+ |short_description=p2@Lrrc4b |description=CAGE_peak_2_at_Lrrc4b_5end |association_with_transcript=-446bp_to_ENSMUST00000058667_5end |...")
 
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{{FFCP
{{FFCP
|id=chr7:51697393..51697408,+
|DHSsupport=NA
|short_description=p2@Lrrc4b
|DPIdataset=NA
|description=CAGE_peak_2_at_Lrrc4b_5end
|association_with_transcript=-446bp_to_ENSMUST00000058667_5end
|EntrezGene=272381
|EntrezGene=272381
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=P0C192
|UniProt=P0C192
|association_with_transcript=-446bp_to_ENSMUST00000058667_5end
|cluster_id=chr7:51697393..51697408,+
|description=CAGE_peak_2_at_Lrrc4b_5end
|id=chr7:51697393..51697408,+
|ontology_enrichment_celltype=CL:0000540!9.07e-22!33;CL:0000047!9.07e-22!33;CL:0000031!9.07e-22!33;CL:0000404!9.07e-22!33;CL:0000221!1.57e-19!44;CL:0000133!1.57e-19!44;CL:0002319!3.89e-19!43;CL:0000117!1.61e-17!23;CL:0000337!1.61e-17!23;CL:0000393!4.71e-16!39;CL:0000211!4.71e-16!39;CL:0000055!4.88e-14!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.71e-27,33;CL:0000047,1.71e-27,33;CL:0000031,1.71e-27,33;CL:0000404,1.71e-27,33;CL:0000221,1.45e-22,44;CL:0000133,1.45e-22,44;CL:0002319,4.61e-22,43;CL:0000117,4.93e-22,23;CL:0000337,4.93e-22,23;CL:0000393,5.31e-21,39;CL:0000211,5.31e-21,39;CL:0002321,7.43e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.39e-34!73;UBERON:0005743!7.39e-34!73;UBERON:0000073!1.51e-32!75;UBERON:0001016!1.51e-32!75;UBERON:0004121!5.10e-28!102;UBERON:0000924!5.10e-28!102;UBERON:0006601!5.10e-28!102;UBERON:0002346!2.18e-25!71;UBERON:0003075!2.18e-25!71;UBERON:0007284!2.18e-25!71;UBERON:0001049!7.01e-23!52;UBERON:0005068!7.01e-23!52;UBERON:0006241!7.01e-23!52;UBERON:0007135!7.01e-23!52;UBERON:0000033!5.02e-22!63;UBERON:0000955!2.24e-21!50;UBERON:0006238!2.24e-21!50;UBERON:0002616!8.14e-21!49;UBERON:0002020!9.97e-19!34;UBERON:0003056!4.83e-18!49;UBERON:0003080!1.41e-16!40;UBERON:0002780!4.47e-16!39;UBERON:0001890!4.47e-16!39;UBERON:0006240!4.47e-16!39;UBERON:0002791!3.38e-15!29;UBERON:0003528!3.38e-15!29;UBERON:0001893!3.38e-15!29;UBERON:0000025!2.31e-10!114;UBERON:0007811!3.20e-10!86;UBERON:0000956!8.89e-10!21;UBERON:0001869!8.89e-10!21;UBERON:0000203!8.89e-10!21;UBERON:0004111!2.79e-09!122;UBERON:0000153!2.16e-08!94;UBERON:0002619!1.72e-07!17;UBERON:0003076!5.53e-07!12;UBERON:0003057!5.53e-07!12;UBERON:0002420!6.72e-07!8;UBERON:0007245!6.72e-07!8;UBERON:0010009!6.72e-07!8;UBERON:0010011!6.72e-07!8;UBERON:0000454!6.72e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.33e-40,73;UBERON:0001016,4.26e-38,75;UBERON:0010314,5.94e-34,92;UBERON:0004121,1.07e-32,95;UBERON:0000924,1.07e-32,95;UBERON:0006601,1.07e-32,95;UBERON:0002346,5.97e-29,64;UBERON:0003075,5.97e-29,64;UBERON:0007284,5.97e-29,64;UBERON:0000073,1.60e-28,54;UBERON:0001049,1.67e-26,52;UBERON:0005068,1.67e-26,52;UBERON:0006241,1.67e-26,52;UBERON:0007135,1.67e-26,52;UBERON:0010371,5.75e-25,73;UBERON:0002020,4.28e-22,34;UBERON:0000955,7.62e-22,47;UBERON:0006238,7.62e-22,47;UBERON:0002616,3.69e-21,46;UBERON:0003056,6.02e-19,49;UBERON:0003080,2.70e-18,40;UBERON:0002780,1.15e-17,39;UBERON:0001890,1.15e-17,39;UBERON:0006240,1.15e-17,39;UBERON:0003528,1.26e-17,29;UBERON:0002791,1.26e-17,29;UBERON:0001893,1.26e-17,29;UBERON:0000025,1.96e-12,114;UBERON:0004111,1.60e-11,122;UBERON:0000956,8.03e-11,21;UBERON:0001869,8.03e-11,21;UBERON:0000203,8.03e-11,21;UBERON:0003076,7.80e-09,12;UBERON:0003057,7.80e-09,12;UBERON:0002420,2.06e-08,8;UBERON:0007245,2.06e-08,8;UBERON:0010009,2.06e-08,8;UBERON:0010011,2.06e-08,8;UBERON:0000454,2.06e-08,8;UBERON:0002619,5.61e-08,17
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0.878744730937887,0.388859798148567,0.55994568650145,0,0,0,0,0,0.286533439938757,0,17.1968991730658,14.2827564403449,24.719424736741,0,0,0,0,0,5.99200221036809,11.9107674649682,10.0578923939223,11.7455166348571,11.567872874326,14.568200204594,15.4607978666129,12.2490799214954,14.3768206527355,16.5459381589804,12.1127469099328,16.2162919368188,18.5863905240055,18.0684214190366,20.9506703849518,14.5855743755893,15.0758819460746,12.9435400307286,17.5717984943332,13.258286346315,12.386336229522,12.1159639786445,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,3.23939865486365,0,0,0,0,0,0,0.11418387971906,0,0,1.56136794089522,1.82679286987285,1.15307748628029,0.60289056221049,0.587943535678524,0.125666591329675,0,0,0,0,0,0,1.86391761218122,8.78342391034641,10.4723353406728,0,0,0,0,6.74057877321702,9.15001205637253,7.91622418311046,9.03886464999838,9.2057564638919,5.61027720310812,10.707923362472,0,0,0,0.420883711772948,1.17108398666433,0.459804208866946,1.80062129805349,2.10986744970001,1.83698547708585,1.5373646434182,2.43624483855295,1.55222022443409,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,2.89976081549703,2.57978665979206,3.6012412292203,4.26140524053378,4.9191057936851,5.707883176833,6.74348439776183,4.56064782379353,2.21854150497622,6.91151369636618,4.26835406605648,1.70244500046297,2.92399974850665,2.63460138349261,1.74468344388483,7.14985825118033,7.20332286654991,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.685491075658373,0,1.01825663922657,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,1.18821560042632,0.469380496577004,0.335012514883631,0.238043640886014,0,0.315270288212382,1.32878813789265,0.797273843287435,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,9.9541365792431,14.8858841972098,0,0.504941854408746,2.83957397474631,3.90438744296638,6.03185513651837,6.93009514062401,6.46116154838943,6.51076020814315,3.64329631507405,11.6902343164525,5.13874111330481,7.06906896127976,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0,0,0,0,2.34079422240703,1.81102157295856,1.71469628025274,0.354680467284547,0.891844088010353,1.48094118541909,1.522324745573,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0.291480836629851,12.0526446306831,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.86404272657441,0.627264888043406,0.655087691238533,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.39061315453185,0.314578033277133,0,0,0,0.810900861160657,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.34177395402186,6.90487854760765,4.58316410751517,7.56154002312225,7.53590771747707,0,7.42524750254986,4.5032120322422,6.34399372577886,7.24864436452548,1.24544817101012,3.59122386060928,2.73173769206615,0.972426868273176,1.46729213839588,1.83843508450014,1.77797382241292,0.824140228955577,0.962757628775446,1.51618327058278,2.5347929989024,1.69763707247469,1.49826411951812,1.34452820050225,1.78049953762401,0.952587382566147,1.27472758539341,1.54327376370964,2.06042950401653,1.17759136107518,2.05721551431249,1.77475806159337,1.66905332963125,1.16277133305863,2.1645157495526,0.930760686808441,1.28049581010941,1.31534855718921,2.17286582153379,0,2.01679530811096,1.57607171800902,2.04615521584845,1.54936841185966,1.54325288784913,3.49734809113124,1.16965804222704,1.07435527024149,0.57386499620653,0.220591419119515,0
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,0.878744730937887,0.388859798148567,0.55994568650145,0,0,0,0,0,0.286533439938757,0,17.1968991730658,14.2827564403449,24.719424736741,0,0,0,0,0,5.99200221036809,11.9107674649682,10.0578923939223,11.7455166348571,11.567872874326,14.568200204594,15.4607978666129,12.2490799214954,14.3768206527355,16.5459381589804,12.1127469099328,16.2162919368188,18.5863905240055,18.0684214190366,20.9506703849518,14.5855743755893,15.0758819460746,12.9435400307286,17.5717984943332,13.258286346315,12.386336229522,12.1159639786445,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,3.23939865486365,0,0,0,0,0,0,0.11418387971906,0,0,1.56136794089522,1.82679286987285,1.15307748628029,0.60289056221049,0.587943535678524,0.125666591329675,0,0,0,0,0,0,1.86391761218122,8.78342391034641,10.4723353406728,0,0,0,0,6.74057877321702,9.15001205637253,7.91622418311046,9.03886464999838,9.2057564638919,5.61027720310812,10.707923362472,0,0,0,0.420883711772948,1.17108398666433,0.459804208866946,1.80062129805349,2.10986744970001,1.83698547708585,1.5373646434182,2.43624483855295,1.55222022443409,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,2.89976081549703,2.57978665979206,3.6012412292203,4.26140524053378,4.9191057936851,5.707883176833,6.74348439776183,4.56064782379353,2.21854150497622,6.91151369636618,4.26835406605648,1.70244500046297,2.92399974850665,2.63460138349261,1.74468344388483,7.14985825118033,7.20332286654991,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.685491075658373,0,1.01825663922657,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,1.18821560042632,0.469380496577004,0.335012514883631,0.238043640886014,0,0.315270288212382,1.32878813789265,0.797273843287435,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,9.9541365792431,14.8858841972098,0,0.504941854408746,2.83957397474631,3.90438744296638,6.03185513651837,6.93009514062401,6.46116154838943,6.51076020814315,3.64329631507405,11.6902343164525,5.13874111330481,7.06906896127976,0,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0,0,0,0,2.34079422240703,1.81102157295856,1.71469628025274,0.354680467284547,0.891844088010353,1.48094118541909,1.522324745573,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0.291480836629851,12.0526446306831,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.86404272657441,0.627264888043406,0.655087691238533,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.39061315453185,0.314578033277133,0,0,0,0.810900861160657,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.34177395402186,6.90487854760765,4.58316410751517,7.56154002312225,7.53590771747707,0,7.42524750254986,4.5032120322422,6.34399372577886,7.24864436452548,1.24544817101012,3.59122386060928,2.73173769206615,0.972426868273176,1.46729213839588,1.83843508450014,1.77797382241292,0.824140228955577,0.962757628775446,1.51618327058278,2.5347929989024,1.69763707247469,1.49826411951812,1.34452820050225,1.78049953762401,0.952587382566147,1.27472758539341,1.54327376370964,2.06042950401653,1.17759136107518,2.05721551431249,1.77475806159337,1.66905332963125,1.16277133305863,2.1645157495526,0.930760686808441,1.28049581010941,1.31534855718921,2.17286582153379,0,2.01679530811096,1.57607171800902,2.04615521584845,1.54936841185966,1.54325288784913,3.49734809113124,1.16965804222704,1.07435527024149,0.57386499620653,0.220591419119515,0
|short_description=p2@Lrrc4b
}}
}}

Latest revision as of 19:14, 26 September 2015

Short description:p2@Lrrc4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrc4b_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -446bp_to_ENSMUST00000058667_5end
EntrezGene:Lrrc4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrrc4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C317.20
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C724.72
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.95
medulla oblongata, neonate N30.CNhs11200.1396-42A314.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.71e-2733
neuronal stem cell1.71e-2733
neuroblast1.71e-2733
electrically signaling cell1.71e-2733
ectodermal cell1.45e-2244
neurectodermal cell1.45e-2244
neural cell4.61e-2243
CNS neuron (sensu Vertebrata)4.93e-2223
neuroblast (sensu Vertebrata)4.93e-2223
electrically responsive cell5.31e-2139
electrically active cell5.31e-2139
embryonic cell7.43e-0970

Uber anatomy
Ontology termp-valuen
central nervous system7.33e-4073
nervous system4.26e-3875
structure with developmental contribution from neural crest5.94e-3492
ectoderm-derived structure1.07e-3295
ectoderm1.07e-3295
presumptive ectoderm1.07e-3295
neurectoderm5.97e-2964
neural plate5.97e-2964
presumptive neural plate5.97e-2964
regional part of nervous system1.60e-2854
neural tube1.67e-2652
neural rod1.67e-2652
future spinal cord1.67e-2652
neural keel1.67e-2652
ecto-epithelium5.75e-2573
gray matter4.28e-2234
brain7.62e-2247
future brain7.62e-2247
regional part of brain3.69e-2146
pre-chordal neural plate6.02e-1949
anterior neural tube2.70e-1840
regional part of forebrain1.15e-1739
forebrain1.15e-1739
future forebrain1.15e-1739
brain grey matter1.26e-1729
regional part of telencephalon1.26e-1729
telencephalon1.26e-1729
tube1.96e-12114
anatomical conduit1.60e-11122
cerebral cortex8.03e-1121
cerebral hemisphere8.03e-1121
pallium8.03e-1121
posterior neural tube7.80e-0912
chordal neural plate7.80e-0912
basal ganglion2.06e-088
nuclear complex of neuraxis2.06e-088
aggregate regional part of brain2.06e-088
collection of basal ganglia2.06e-088
cerebral subcortex2.06e-088
regional part of cerebral cortex5.61e-0817
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