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FFCP PHASE1:Mm9::chr12:77923723..77923744,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104886
|EntrezGene=104886
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3TYH2
|UniProt=Q3TYH2
|association_with_transcript=-183bp_to_ENSMUST00000021459_5end
|association_with_transcript=-183bp_to_ENSMUST00000021459_5end
|cluster_id=chr12:77923723..77923744,-
|description=CAGE_peak_4_at_Rab15_5end
|description=CAGE_peak_4_at_Rab15_5end
|id=chr12:77923723..77923744,-
|id=chr12:77923723..77923744,-
|ontology_enrichment_celltype=CL:0000117!9.18e-14!23;CL:0000337!9.18e-14!23;CL:0000540!9.04e-10!33;CL:0000047!9.04e-10!33;CL:0000031!9.04e-10!33;CL:0000404!9.04e-10!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.47e-22,23;CL:0000337,2.47e-22,23;CL:0000540,1.43e-14,33;CL:0000047,1.43e-14,33;CL:0000031,1.43e-14,33;CL:0000404,1.43e-14,33;CL:0000393,3.96e-11,39;CL:0000211,3.96e-11,39;CL:0002319,2.11e-09,43;CL:0000221,5.05e-09,44;CL:0000133,5.05e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.53e-21!52;UBERON:0005068!1.53e-21!52;UBERON:0006241!1.53e-21!52;UBERON:0007135!1.53e-21!52;UBERON:0000955!1.86e-20!50;UBERON:0006238!1.86e-20!50;UBERON:0001017!2.24e-20!73;UBERON:0005743!2.24e-20!73;UBERON:0002616!6.02e-20!49;UBERON:0000073!9.19e-20!75;UBERON:0001016!9.19e-20!75;UBERON:0000033!9.87e-20!63;UBERON:0004121!1.57e-18!102;UBERON:0000924!1.57e-18!102;UBERON:0006601!1.57e-18!102;UBERON:0002020!2.13e-18!34;UBERON:0003080!1.69e-17!40;UBERON:0002780!6.28e-17!39;UBERON:0001890!6.28e-17!39;UBERON:0006240!6.28e-17!39;UBERON:0002346!1.26e-16!71;UBERON:0003075!1.26e-16!71;UBERON:0007284!1.26e-16!71;UBERON:0003056!3.56e-16!49;UBERON:0002791!1.59e-15!29;UBERON:0003528!1.59e-15!29;UBERON:0001893!1.59e-15!29;UBERON:0000153!7.92e-12!94;UBERON:0007811!5.30e-11!86;UBERON:0000956!1.60e-10!21;UBERON:0001869!1.60e-10!21;UBERON:0000203!1.60e-10!21;UBERON:0002619!2.02e-08!17;UBERON:0002021!2.69e-08!10;UBERON:0000411!2.69e-08!10;UBERON:0001950!2.69e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.23e-38,54;UBERON:0001049,8.79e-36,52;UBERON:0005068,8.79e-36,52;UBERON:0006241,8.79e-36,52;UBERON:0007135,8.79e-36,52;UBERON:0001017,4.59e-33,73;UBERON:0002020,6.90e-32,34;UBERON:0001016,1.04e-31,75;UBERON:0000955,5.00e-31,47;UBERON:0006238,5.00e-31,47;UBERON:0002616,3.59e-30,46;UBERON:0002346,1.24e-28,64;UBERON:0003075,1.24e-28,64;UBERON:0007284,1.24e-28,64;UBERON:0003080,2.07e-28,40;UBERON:0002780,1.94e-27,39;UBERON:0001890,1.94e-27,39;UBERON:0006240,1.94e-27,39;UBERON:0003528,6.00e-27,29;UBERON:0002791,6.00e-27,29;UBERON:0001893,6.00e-27,29;UBERON:0010371,9.36e-26,73;UBERON:0004121,1.44e-25,95;UBERON:0000924,1.44e-25,95;UBERON:0006601,1.44e-25,95;UBERON:0003056,2.14e-23,49;UBERON:0000956,2.56e-18,21;UBERON:0001869,2.56e-18,21;UBERON:0000203,2.56e-18,21;UBERON:0010314,2.98e-16,92;UBERON:0002619,1.04e-14,17;UBERON:0002021,5.02e-13,10;UBERON:0000411,5.02e-13,10;UBERON:0001950,5.02e-13,10;UBERON:0004111,1.15e-10,122;UBERON:0002420,1.00e-09,8;UBERON:0007245,1.00e-09,8;UBERON:0010009,1.00e-09,8;UBERON:0010011,1.00e-09,8;UBERON:0000454,1.00e-09,8;UBERON:0000025,4.99e-09,114;UBERON:0003076,1.27e-07,12;UBERON:0003057,1.27e-07,12;UBERON:0000369,4.74e-07,5;UBERON:0002435,4.74e-07,5;UBERON:0000204,4.74e-07,5;UBERON:0010082,4.74e-07,5
|phase1_expression=2.5623815536767,0,0,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.380046838912748,0.756090389279792,1.99557459589774,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,3.64169629547276,5.28990979272033,3.1691570175309,1.35537812827653,0,0,0,0,0.599200221036809,0,2.59224030771194,3.37514845829227,2.3135745748652,3.71346279724945,3.09215957332259,2.9397791811589,1.91690942036473,2.75765635983006,2.20231761998777,2.80912143787413,3.84016333140609,3.69281605644543,3.84248103130121,5.2091337055676,2.51264699101243,3.37657566019008,3.97275444219706,2.94628585473668,2.56269025438385,3.91438836233131,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.22836775943812,0,0.148442139064825,0.867426633830679,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,2.63502717310392,3.56059401582874,0.255457055208591,0,0,0,3.14560342750128,11.4375150704657,10.178002521142,4.17178368461463,8.18289463457058,3.94797284663164,6.48965052271031,1.01839363850316,0.248813941220186,0,0,0.390361328888111,1.14951052216736,0.720248519221397,0.60281927134286,0.544291993210623,1.0249097622788,0.655912071918102,0,0.215567992932842,0.567318240503458,1.40760899331159,2.84954452155847,0.834141747676794,1.39300866608867,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,3.78521907415429,4.42489833230923,0,0,0.853153002140936,0.464473343720877,0.77320476793256,0.80673409849337,0.667134131534611,0.570676878337677,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.631222379012867,0.316182685621286,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.757965647081939,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.491589944147214,0,0.289298117163023,0,0,0.491764273019036,1.37968373152366,2.0871576698413,3.16471553798949,0,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0,2.24924921495265,0.425820255624806,0.890328018336276,1.14020871547503,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,1.26042765821917,2.19909762430683,1.50035924522115,0.177340233642274,0.891844088010353,1.31639216481697,0.608929898229199,0.938686832254841,1.27099242518292,1.10264199027481,0.16488625294148,0.968786560175433,0.904693873922338,0.954978752025092,0.656563598980245,0.582961673259701,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0.954670618015114,0.790839983952838,1.42323626988794,0.972048067396211,0,0.218362563746178,0.674321731924103,0.909188012978695,0,0.388844919875379,1.86401793926078,0,0.448549638131936,0.330916980914195,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,1.41907650703115,1.23253148597793,0.649604114888975,0,0.39736270956253,0.360586348559907,0,0.302899349844443,0.228620419965,0.100826185136841,0,0,0.233753804363138,0,0.443971906748129,0.448569283047378,0.503653849092235,1.15913756419314,0,0.183151624267265,0.857473516316263,3.00943262421218,4.51801474093653,12.889106622201,4.58316410751517,6.70227411140382,6.16574267793578,8.3093328712867,4.05013500139084,8.10578165803597,7.25027854374727,6.73088405277366,0.726511433089237,0,0.512200817262403,0.972426868273176,0.838452650511929,1.10306105070008,0.44449345560323,1.23621034343337,1.60459604795908,1.01078884705519,0.25347929989024,0.565879024158229,1.12369808963859,1.34452820050225,1.14870937911227,0.952587382566147,0.811190281613988,0.38581844092741,0.824171801606613,1.03039244094078,0.685738504770831,0.887379030796687,0.715308569841963,1.0174249164263,1.2234219453993,1.26921911837515,1.28049581010941,0.526139422875686,0.543216455383447,1.12228454331548,0.593175090620871,1.28055827088233,1.63692417267876,0.929621047115796,1.73615949883027,1.74867404556562,0.935726433781634,0.859484216193193,0.765153328275374,0.882365676478062,0.231867835620421
|phase1_expression=2.5623815536767,0,0,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.380046838912748,0.756090389279792,1.99557459589774,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0,3.64169629547276,5.28990979272033,3.1691570175309,1.35537812827653,0,0,0,0,0.599200221036809,0,2.59224030771194,3.37514845829227,2.3135745748652,3.71346279724945,3.09215957332259,2.9397791811589,1.91690942036473,2.75765635983006,2.20231761998777,2.80912143787413,3.84016333140609,3.69281605644543,3.84248103130121,5.2091337055676,2.51264699101243,3.37657566019008,3.97275444219706,2.94628585473668,2.56269025438385,3.91438836233131,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.22836775943812,0,0.148442139064825,0.867426633830679,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,2.63502717310392,3.56059401582874,0.255457055208591,0,0,0,3.14560342750128,11.4375150704657,10.178002521142,4.17178368461463,8.18289463457058,3.94797284663164,6.48965052271031,1.01839363850316,0.248813941220186,0,0,0.390361328888111,1.14951052216736,0.720248519221397,0.60281927134286,0.544291993210623,1.0249097622788,0.655912071918102,0,0.215567992932842,0.567318240503458,1.40760899331159,2.84954452155847,0.834141747676794,1.39300866608867,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,3.78521907415429,4.42489833230923,0,0,0.853153002140936,0.464473343720877,0.77320476793256,0.80673409849337,0.667134131534611,0.570676878337677,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.631222379012867,0.316182685621286,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.757965647081939,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.491589944147214,0,0.289298117163023,0,0,0.491764273019036,1.37968373152366,2.0871576698413,3.16471553798949,0,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0,0.292255857911312,0,2.24924921495265,0.425820255624806,0.890328018336276,1.14020871547503,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,1.26042765821917,2.19909762430683,1.50035924522115,0.177340233642274,0.891844088010353,1.31639216481697,0.608929898229199,0.938686832254841,1.27099242518292,1.10264199027481,0.16488625294148,0.968786560175433,0.904693873922338,0.954978752025092,0.656563598980245,0.582961673259701,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0.954670618015114,0.790839983952838,1.42323626988794,0.972048067396211,0,0.218362563746178,0.674321731924103,0.909188012978695,0,0.388844919875379,1.86401793926078,0,0.448549638131936,0.330916980914195,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,1.41907650703115,1.23253148597793,0.649604114888975,0,0.39736270956253,0.360586348559907,0,0.302899349844443,0.228620419965,0.100826185136841,0,0,0.233753804363138,0,0.443971906748129,0.448569283047378,0.503653849092235,1.15913756419314,0,0.183151624267265,0.857473516316263,3.00943262421218,4.51801474093653,12.889106622201,4.58316410751517,6.70227411140382,6.16574267793578,8.3093328712867,4.05013500139084,8.10578165803597,7.25027854374727,6.73088405277366,0.726511433089237,0,0.512200817262403,0.972426868273176,0.838452650511929,1.10306105070008,0.44449345560323,1.23621034343337,1.60459604795908,1.01078884705519,0.25347929989024,0.565879024158229,1.12369808963859,1.34452820050225,1.14870937911227,0.952587382566147,0.811190281613988,0.38581844092741,0.824171801606613,1.03039244094078,0.685738504770831,0.887379030796687,0.715308569841963,1.0174249164263,1.2234219453993,1.26921911837515,1.28049581010941,0.526139422875686,0.543216455383447,1.12228454331548,0.593175090620871,1.28055827088233,1.63692417267876,0.929621047115796,1.73615949883027,1.74867404556562,0.935726433781634,0.859484216193193,0.765153328275374,0.882365676478062,0.231867835620421
|short_description=p4@Rab15
|short_description=p4@Rab15
}}
}}

Latest revision as of 19:41, 26 September 2015

Short description:p4@Rab15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rab15_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -183bp_to_ENSMUST00000021459_5end
EntrezGene:Rab15
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rab15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F110.18
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G14.42
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.47e-2223
neuroblast (sensu Vertebrata)2.47e-2223
neuron1.43e-1433
neuronal stem cell1.43e-1433
neuroblast1.43e-1433
electrically signaling cell1.43e-1433
electrically responsive cell3.96e-1139
electrically active cell3.96e-1139
neural cell2.11e-0943
ectodermal cell5.05e-0944
neurectodermal cell5.05e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.23e-3854
neural tube8.79e-3652
neural rod8.79e-3652
future spinal cord8.79e-3652
neural keel8.79e-3652
central nervous system4.59e-3373
gray matter6.90e-3234
nervous system1.04e-3175
brain5.00e-3147
future brain5.00e-3147
regional part of brain3.59e-3046
neurectoderm1.24e-2864
neural plate1.24e-2864
presumptive neural plate1.24e-2864
anterior neural tube2.07e-2840
regional part of forebrain1.94e-2739
forebrain1.94e-2739
future forebrain1.94e-2739
brain grey matter6.00e-2729
regional part of telencephalon6.00e-2729
telencephalon6.00e-2729
ecto-epithelium9.36e-2673
ectoderm-derived structure1.44e-2595
ectoderm1.44e-2595
presumptive ectoderm1.44e-2595
pre-chordal neural plate2.14e-2349
cerebral cortex2.56e-1821
cerebral hemisphere2.56e-1821
pallium2.56e-1821
structure with developmental contribution from neural crest2.98e-1692
regional part of cerebral cortex1.04e-1417
occipital lobe5.02e-1310
visual cortex5.02e-1310
neocortex5.02e-1310
anatomical conduit1.15e-10122
basal ganglion1.00e-098
nuclear complex of neuraxis1.00e-098
aggregate regional part of brain1.00e-098
collection of basal ganglia1.00e-098
cerebral subcortex1.00e-098
tube4.99e-09114
posterior neural tube1.27e-0712
chordal neural plate1.27e-0712
corpus striatum4.74e-075
striatum4.74e-075
ventral part of telencephalon4.74e-075
future corpus striatum4.74e-075
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