FFCP PHASE1:Mm9::chr17:70318531..70318542,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=224997|HGNC=|MCL_coexpression_id=1|UniProt=Q9D415|association_with_transcript=-43bp_to_ENSMUST00000060072_5end|description=CAGE_peak_11_at_Dlgap1_5end|id=chr17:70318531..70318542,+|ontology_enrichment_celltype=CL:0000117!9.12e-17!23;CL:0000337!9.12e-17!23;CL:0000540!1.23e-12!33;CL:0000047!1.23e-12!33;CL:0000031!1.23e-12!33;CL:0000404!1.23e-12!33;CL:0000393!1.61e-09!39;CL:0000211!1.61e-09!39;CL:0002319!5.76e-08!43;CL:0000221!1.26e-07!44;CL:0000133!1.26e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-13,23;CL:0000337,1.16e-13,23;CL:0000540,1.14e-08,33;CL:0000047,1.14e-08,33;CL:0000031,1.14e-08,33;CL:0000404,1.14e-08,33;CL:0002610,8.17e-08,3;CL:0002612,1.24e-07,3;CL:0000393,6.38e-07,39;CL:0000211,6.38e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.88e-27!52;UBERON:0005068!9.88e-27!52;UBERON:0006241!9.88e-27!52;UBERON:0007135!9.88e-27!52;UBERON:0002020!1.85e-26!34;UBERON:0001017!3.65e-26!73;UBERON:0005743!3.65e-26!73;UBERON:0000033!1.55e-25!63;UBERON:0000955!3.18e-25!50;UBERON:0006238!3.18e-25!50;UBERON:0000073!5.30e-25!75;UBERON:0001016!5.30e-25!75;UBERON:0002346!1.97e-24!71;UBERON:0003075!1.97e-24!71;UBERON:0007284!1.97e-24!71;UBERON:0002616!4.36e-24!49;UBERON:0002791!1.41e-21!29;UBERON:0003528!1.41e-21!29;UBERON:0001893!1.41e-21!29;UBERON:0004121!5.19e-21!102;UBERON:0000924!5.19e-21!102;UBERON:0006601!5.19e-21!102;UBERON:0003056!1.89e-20!49;UBERON:0003080!1.04e-18!40;UBERON:0002780!8.31e-18!39;UBERON:0001890!8.31e-18!39;UBERON:0006240!8.31e-18!39;UBERON:0000956!1.30e-14!21;UBERON:0001869!1.30e-14!21;UBERON:0000203!1.30e-14!21;UBERON:0007811!1.39e-14!86;UBERON:0002619!3.23e-13!17;UBERON:0000153!4.14e-12!94;UBERON:0002021!1.11e-11!10;UBERON:0000411!1.11e-11!10;UBERON:0001950!1.11e-11!10;UBERON:0003076!1.35e-08!12;UBERON:0003057!1.35e-08!12;UBERON:0002420!3.44e-08!8;UBERON:0007245!3.44e-08!8;UBERON:0010009!3.44e-08!8;UBERON:0010011!3.44e-08!8;UBERON:0000454!3.44e-08!8;UBERON:0002240!5.48e-07!6;UBERON:0005174!5.48e-07!6;UBERON:0001137!5.48e-07!6;UBERON:0002298!6.50e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-40,54;UBERON:0001017,9.51e-37,73;UBERON:0001049,1.31e-36,52;UBERON:0005068,1.31e-36,52;UBERON:0006241,1.31e-36,52;UBERON:0007135,1.31e-36,52;UBERON:0001016,1.45e-35,75;UBERON:0002020,3.06e-31,34;UBERON:0002346,2.10e-30,64;UBERON:0003075,2.10e-30,64;UBERON:0007284,2.10e-30,64;UBERON:0000955,2.44e-28,47;UBERON:0006238,2.44e-28,47;UBERON:0004121,4.11e-28,95;UBERON:0000924,4.11e-28,95;UBERON:0006601,4.11e-28,95;UBERON:0002616,2.07e-26,46;UBERON:0010371,9.01e-26,73;UBERON:0002021,1.86e-22,10;UBERON:0000411,1.86e-22,10;UBERON:0001950,1.86e-22,10;UBERON:0003528,1.87e-22,29;UBERON:0002791,1.87e-22,29;UBERON:0001893,1.87e-22,29;UBERON:0003080,4.18e-21,40;UBERON:0002780,1.44e-19,39;UBERON:0001890,1.44e-19,39;UBERON:0006240,1.44e-19,39;UBERON:0010314,5.79e-19,92;UBERON:0003056,6.12e-18,49;UBERON:0002619,6.31e-18,17;UBERON:0003076,4.07e-17,12;UBERON:0003057,4.07e-17,12;UBERON:0000956,9.85e-17,21;UBERON:0001869,9.85e-17,21;UBERON:0000203,9.85e-17,21;UBERON:0000025,7.36e-13,114;UBERON:0002240,8.98e-13,6;UBERON:0005174,8.98e-13,6;UBERON:0001137,8.98e-13,6;UBERON:0004111,1.49e-11,122;UBERON:0001948,6.43e-11,5;UBERON:0002315,6.43e-11,5;UBERON:0011216,5.81e-09,194;UBERON:0004684,8.17e-08,3;UBERON:0002275,8.17e-08,3;UBERON:0002257,1.24e-07,3;UBERON:0002420,7.43e-07,8;UBERON:0007245,7.43e-07,8;UBERON:0010009,7.43e-07,8;UBERON:0010011,7.43e-07,8;UBERON:0000454,7.43e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0,0.420649922702764,1.14260393761521,1.54607978666129,0.734944795289724,0.575072826109418,0.919218786610021,4.40463523997555,2.93680877595932,2.4577045320999,0.923204014111357,1.55528994124096,0.52091337055676,2.79182999001381,0.56276261003168,3.20876320331301,3.53554302568401,1.99320353118744,3.16879057903011,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,8.49064311333487,2.72280718857492,0,0,0,0,2.24685959107234,4.11750542536764,1.13088916901578,6.08385120672968,6.13717097592793,2.28566849015516,1.94689515681309,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.748401490664606,0.512454881139399,0.749613796477831,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99101804543684,1.44066457330998,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.34423373184406,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0,8.35435422696698,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,1.84130094602871,1.71868654031819,4.46818274093588,2.05524755931193,5.2877572817279,4.72515750162264,4.5032120322422,3.62513927187364,3.10656187051092,0,0,0.341467211508268,0,0.419226325255965,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0.342869252385415,0.887379030796687,0.953744759789284,0.436039249896986,0.376437521661322,0.338458431566706,0,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.464810523557898,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0,0,0|short_description=p11@Dlgap1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224997 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D415 | |||
|association_with_transcript=-43bp_to_ENSMUST00000060072_5end | |||
|cluster_id=chr17:70318531..70318542,+ | |||
|description=CAGE_peak_11_at_Dlgap1_5end | |||
|id=chr17:70318531..70318542,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.12e-17!23;CL:0000337!9.12e-17!23;CL:0000540!1.23e-12!33;CL:0000047!1.23e-12!33;CL:0000031!1.23e-12!33;CL:0000404!1.23e-12!33;CL:0000393!1.61e-09!39;CL:0000211!1.61e-09!39;CL:0002319!5.76e-08!43;CL:0000221!1.26e-07!44;CL:0000133!1.26e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-13,23;CL:0000337,1.16e-13,23;CL:0000540,1.14e-08,33;CL:0000047,1.14e-08,33;CL:0000031,1.14e-08,33;CL:0000404,1.14e-08,33;CL:0002610,8.17e-08,3;CL:0002612,1.24e-07,3;CL:0000393,6.38e-07,39;CL:0000211,6.38e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.88e-27!52;UBERON:0005068!9.88e-27!52;UBERON:0006241!9.88e-27!52;UBERON:0007135!9.88e-27!52;UBERON:0002020!1.85e-26!34;UBERON:0001017!3.65e-26!73;UBERON:0005743!3.65e-26!73;UBERON:0000033!1.55e-25!63;UBERON:0000955!3.18e-25!50;UBERON:0006238!3.18e-25!50;UBERON:0000073!5.30e-25!75;UBERON:0001016!5.30e-25!75;UBERON:0002346!1.97e-24!71;UBERON:0003075!1.97e-24!71;UBERON:0007284!1.97e-24!71;UBERON:0002616!4.36e-24!49;UBERON:0002791!1.41e-21!29;UBERON:0003528!1.41e-21!29;UBERON:0001893!1.41e-21!29;UBERON:0004121!5.19e-21!102;UBERON:0000924!5.19e-21!102;UBERON:0006601!5.19e-21!102;UBERON:0003056!1.89e-20!49;UBERON:0003080!1.04e-18!40;UBERON:0002780!8.31e-18!39;UBERON:0001890!8.31e-18!39;UBERON:0006240!8.31e-18!39;UBERON:0000956!1.30e-14!21;UBERON:0001869!1.30e-14!21;UBERON:0000203!1.30e-14!21;UBERON:0007811!1.39e-14!86;UBERON:0002619!3.23e-13!17;UBERON:0000153!4.14e-12!94;UBERON:0002021!1.11e-11!10;UBERON:0000411!1.11e-11!10;UBERON:0001950!1.11e-11!10;UBERON:0003076!1.35e-08!12;UBERON:0003057!1.35e-08!12;UBERON:0002420!3.44e-08!8;UBERON:0007245!3.44e-08!8;UBERON:0010009!3.44e-08!8;UBERON:0010011!3.44e-08!8;UBERON:0000454!3.44e-08!8;UBERON:0002240!5.48e-07!6;UBERON:0005174!5.48e-07!6;UBERON:0001137!5.48e-07!6;UBERON:0002298!6.50e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.28e-40,54;UBERON:0001017,9.51e-37,73;UBERON:0001049,1.31e-36,52;UBERON:0005068,1.31e-36,52;UBERON:0006241,1.31e-36,52;UBERON:0007135,1.31e-36,52;UBERON:0001016,1.45e-35,75;UBERON:0002020,3.06e-31,34;UBERON:0002346,2.10e-30,64;UBERON:0003075,2.10e-30,64;UBERON:0007284,2.10e-30,64;UBERON:0000955,2.44e-28,47;UBERON:0006238,2.44e-28,47;UBERON:0004121,4.11e-28,95;UBERON:0000924,4.11e-28,95;UBERON:0006601,4.11e-28,95;UBERON:0002616,2.07e-26,46;UBERON:0010371,9.01e-26,73;UBERON:0002021,1.86e-22,10;UBERON:0000411,1.86e-22,10;UBERON:0001950,1.86e-22,10;UBERON:0003528,1.87e-22,29;UBERON:0002791,1.87e-22,29;UBERON:0001893,1.87e-22,29;UBERON:0003080,4.18e-21,40;UBERON:0002780,1.44e-19,39;UBERON:0001890,1.44e-19,39;UBERON:0006240,1.44e-19,39;UBERON:0010314,5.79e-19,92;UBERON:0003056,6.12e-18,49;UBERON:0002619,6.31e-18,17;UBERON:0003076,4.07e-17,12;UBERON:0003057,4.07e-17,12;UBERON:0000956,9.85e-17,21;UBERON:0001869,9.85e-17,21;UBERON:0000203,9.85e-17,21;UBERON:0000025,7.36e-13,114;UBERON:0002240,8.98e-13,6;UBERON:0005174,8.98e-13,6;UBERON:0001137,8.98e-13,6;UBERON:0004111,1.49e-11,122;UBERON:0001948,6.43e-11,5;UBERON:0002315,6.43e-11,5;UBERON:0011216,5.81e-09,194;UBERON:0004684,8.17e-08,3;UBERON:0002275,8.17e-08,3;UBERON:0002257,1.24e-07,3;UBERON:0002420,7.43e-07,8;UBERON:0007245,7.43e-07,8;UBERON:0010009,7.43e-07,8;UBERON:0010011,7.43e-07,8;UBERON:0000454,7.43e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0,0,0.829516898467821,0,0.420649922702764,1.14260393761521,1.54607978666129,0.734944795289724,0.575072826109418,0.919218786610021,4.40463523997555,2.93680877595932,2.4577045320999,0.923204014111357,1.55528994124096,0.52091337055676,2.79182999001381,0.56276261003168,3.20876320331301,3.53554302568401,1.99320353118744,3.16879057903011,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,8.49064311333487,2.72280718857492,0,0,0,0,2.24685959107234,4.11750542536764,1.13088916901578,6.08385120672968,6.13717097592793,2.28566849015516,1.94689515681309,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.748401490664606,0.512454881139399,0.749613796477831,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99101804543684,1.44066457330998,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,2.34423373184406,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0,8.35435422696698,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,1.84130094602871,1.71868654031819,4.46818274093588,2.05524755931193,5.2877572817279,4.72515750162264,4.5032120322422,3.62513927187364,3.10656187051092,0,0,0.341467211508268,0,0.419226325255965,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0,0.463537303779422,0.192909220463705,0,0.147198920134397,0.342869252385415,0.887379030796687,0.953744759789284,0.436039249896986,0.376437521661322,0.338458431566706,0,0,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.464810523557898,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p11@Dlgap1 | |||
}} |
Latest revision as of 19:53, 26 September 2015
Short description: | p11@Dlgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Dlgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -43bp_to_ENSMUST00000060072_5end |
EntrezGene: | Dlgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.16e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-13 | 23 |
neuron | 1.14e-08 | 33 |
neuronal stem cell | 1.14e-08 | 33 |
neuroblast | 1.14e-08 | 33 |
electrically signaling cell | 1.14e-08 | 33 |
raphe nuclei neuron | 8.17e-08 | 3 |
neuron of the ventral spinal cord | 1.24e-07 | 3 |
electrically responsive cell | 6.38e-07 | 39 |
electrically active cell | 6.38e-07 | 39 |