FFCP PHASE1:Mm9::chr2:65506810..65506826,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110876 | |EntrezGene=110876 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc008jwn.2_5end | |association_with_transcript=28bp_to_uc008jwn.2_5end | ||
|cluster_id=chr2:65506810..65506826,+ | |||
|description=CAGE_peak_3_at_Scn2a1_5end | |description=CAGE_peak_3_at_Scn2a1_5end | ||
|id=chr2:65506810..65506826,+ | |id=chr2:65506810..65506826,+ | ||
|ontology_enrichment_celltype=CL:0000393!5.67e-10!39;CL:0000211!5.67e-10!39;CL:0000540!1.81e-08!33;CL:0000047!1.81e-08!33;CL:0000031!1.81e-08!33;CL:0000404!1.81e-08!33;CL:0000117!2.53e-08!23;CL:0000337!2.53e-08!23;CL:0000055!3.16e-08!50;CL:0002319!3.14e-07!43;CL:0000221!3.57e-07!44;CL:0000133!3.57e-07!44 | |ontology_enrichment_celltype=CL:0000393!5.67e-10!39;CL:0000211!5.67e-10!39;CL:0000540!1.81e-08!33;CL:0000047!1.81e-08!33;CL:0000031!1.81e-08!33;CL:0000404!1.81e-08!33;CL:0000117!2.53e-08!23;CL:0000337!2.53e-08!23;CL:0000055!3.16e-08!50;CL:0002319!3.14e-07!43;CL:0000221!3.57e-07!44;CL:0000133!3.57e-07!44 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.69e-24!73;UBERON:0005743!5.69e-24!73;UBERON:0000073!1.62e-22!75;UBERON:0001016!1.62e-22!75;UBERON:0000033!8.02e-22!63;UBERON:0001049!2.86e-21!52;UBERON:0005068!2.86e-21!52;UBERON:0006241!2.86e-21!52;UBERON:0007135!2.86e-21!52;UBERON:0000955!1.15e-20!50;UBERON:0006238!1.15e-20!50;UBERON:0002616!5.33e-20!49;UBERON:0002346!6.69e-20!71;UBERON:0003075!6.69e-20!71;UBERON:0007284!6.69e-20!71;UBERON:0004121!3.85e-18!102;UBERON:0000924!3.85e-18!102;UBERON:0006601!3.85e-18!102;UBERON:0003056!2.15e-16!49;UBERON:0002020!5.46e-16!34;UBERON:0003080!7.65e-15!40;UBERON:0002780!3.29e-14!39;UBERON:0001890!3.29e-14!39;UBERON:0006240!3.29e-14!39;UBERON:0002791!2.11e-13!29;UBERON:0003528!2.11e-13!29;UBERON:0001893!2.11e-13!29;UBERON:0007811!1.31e-10!86;UBERON:0000153!3.61e-10!94;UBERON:0002619!3.74e-09!17;UBERON:0000956!4.00e-09!21;UBERON:0001869!4.00e-09!21;UBERON:0000203!4.00e-09!21;UBERON:0002021!4.27e-09!10;UBERON:0000411!4.27e-09!10;UBERON:0001950!4.27e-09!10;UBERON:0003076!3.03e-07!12;UBERON:0003057!3.03e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!5.69e-24!73;UBERON:0005743!5.69e-24!73;UBERON:0000073!1.62e-22!75;UBERON:0001016!1.62e-22!75;UBERON:0000033!8.02e-22!63;UBERON:0001049!2.86e-21!52;UBERON:0005068!2.86e-21!52;UBERON:0006241!2.86e-21!52;UBERON:0007135!2.86e-21!52;UBERON:0000955!1.15e-20!50;UBERON:0006238!1.15e-20!50;UBERON:0002616!5.33e-20!49;UBERON:0002346!6.69e-20!71;UBERON:0003075!6.69e-20!71;UBERON:0007284!6.69e-20!71;UBERON:0004121!3.85e-18!102;UBERON:0000924!3.85e-18!102;UBERON:0006601!3.85e-18!102;UBERON:0003056!2.15e-16!49;UBERON:0002020!5.46e-16!34;UBERON:0003080!7.65e-15!40;UBERON:0002780!3.29e-14!39;UBERON:0001890!3.29e-14!39;UBERON:0006240!3.29e-14!39;UBERON:0002791!2.11e-13!29;UBERON:0003528!2.11e-13!29;UBERON:0001893!2.11e-13!29;UBERON:0007811!1.31e-10!86;UBERON:0000153!3.61e-10!94;UBERON:0002619!3.74e-09!17;UBERON:0000956!4.00e-09!21;UBERON:0001869!4.00e-09!21;UBERON:0000203!4.00e-09!21;UBERON:0002021!4.27e-09!10;UBERON:0000411!4.27e-09!10;UBERON:0001950!4.27e-09!10;UBERON:0003076!3.03e-07!12;UBERON:0003057!3.03e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.27e-31,54;UBERON:0001049,3.68e-28,52;UBERON:0005068,3.68e-28,52;UBERON:0006241,3.68e-28,52;UBERON:0007135,3.68e-28,52;UBERON:0001017,1.03e-25,73;UBERON:0000955,1.83e-25,47;UBERON:0006238,1.83e-25,47;UBERON:0001016,8.67e-25,75;UBERON:0002616,4.48e-24,46;UBERON:0002020,6.61e-24,34;UBERON:0002346,4.45e-23,64;UBERON:0003075,4.45e-23,64;UBERON:0007284,4.45e-23,64;UBERON:0003528,2.87e-21,29;UBERON:0002791,2.87e-21,29;UBERON:0001893,2.87e-21,29;UBERON:0002021,7.36e-21,10;UBERON:0000411,7.36e-21,10;UBERON:0001950,7.36e-21,10;UBERON:0003080,1.39e-19,40;UBERON:0010371,3.15e-19,73;UBERON:0004121,5.11e-19,95;UBERON:0000924,5.11e-19,95;UBERON:0006601,5.11e-19,95;UBERON:0002780,2.99e-18,39;UBERON:0001890,2.99e-18,39;UBERON:0006240,2.99e-18,39;UBERON:0003056,1.87e-16,49;UBERON:0002619,4.95e-16,17;UBERON:0000956,1.02e-14,21;UBERON:0001869,1.02e-14,21;UBERON:0000203,1.02e-14,21;UBERON:0010314,1.23e-14,92;UBERON:0000025,2.26e-09,114;UBERON:0003076,4.17e-09,12;UBERON:0003057,4.17e-09,12;UBERON:0004111,2.94e-08,122;UBERON:0002420,9.65e-08,8;UBERON:0007245,9.65e-08,8;UBERON:0010009,9.65e-08,8;UBERON:0010011,9.65e-08,8;UBERON:0000454,9.65e-08,8;UBERON:0002950,1.04e-07,4;UBERON:0001891,1.04e-07,4;UBERON:0009616,1.04e-07,4;UBERON:0010286,1.04e-07,4 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.183546752161682,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,1.02903774414379,0.85960031981627,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0,1.71390590642282,0.441737081903227,0.489963196859816,0.479227355091182,0,2.20231761998777,4.59674417106676,5.52983519722476,0.923204014111357,1.18933936683133,0.52091337055676,1.3959149950069,4.50210088025344,3.20876320331301,5.00868595305235,4.9830088279686,0.931997229126503,0,0,0,0,0,0,0,0,0.421333260395256,0.681721290312231,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0.86759614151947,0,0.161766849947409,0.220841518460394,0,0,22.2513405728776,22.8296910426666,0,0,0,0,4.19413790333504,10.5225138648284,2.01046963380583,18.4253779403813,17.6443665557928,7.06479351502504,10.058958310201,0.407357455401265,0,0,0.210441855886474,0.390361328888111,0.689706313300419,0,0.30140963567143,0.884474488967262,0.512454881139399,0.843315521037559,2.58703370739016,0.215567992932842,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.402619256281115,7.36014819974445,1.9551876352064,0,0,0,0.232236671860439,0,0,0,0.570676878337677,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.339490171550376,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,2.88991061978026,3.5163505977661,1.47541450839008,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0,1.18586333383957,2.89189184779626,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0.604647113929502,0.377210159511796,0,0,0,0.727067458955011,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0.582961673259701,1.11255181206306,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.335769232728157,0.772758376128762,0.187682475451182,0.36630324853453,0,0,33.3203587144069,24.8575627713876,17.7597609166213,25.2624178045221,24.6629707117431,22.661816921691,23.6257875081132,14.8605997063993,21.7508356312418,17.0860902878101,0.415149390336707,0,0.512200817262403,0.486213434136588,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,1.28367683836726,0.505394423527595,1.2673964994512,1.13175804831646,0.655490552289177,0.576226371643824,0.689225627467359,0,0.927074607558844,0.578727661391115,0.824171801606613,0.883193520806384,1.02860775715625,1.06485483695602,1.1921809497366,0.581385666529314,0.941093804153306,0.507687647350059,0.548783918618318,1.31534855718921,0.950628796921032,1.68342681497322,0.355905054372522,0.886540341380071,0,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.183546752161682,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,1.02903774414379,0.85960031981627,0.515672092277442,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0,1.71390590642282,0.441737081903227,0.489963196859816,0.479227355091182,0,2.20231761998777,4.59674417106676,5.52983519722476,0.923204014111357,1.18933936683133,0.52091337055676,1.3959149950069,4.50210088025344,3.20876320331301,5.00868595305235,4.9830088279686,0.931997229126503,0,0,0,0,0,0,0,0,0.421333260395256,0.681721290312231,0,0,0.14084341977668,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0.86759614151947,0,0.161766849947409,0.220841518460394,0,0,22.2513405728776,22.8296910426666,0,0,0,0,4.19413790333504,10.5225138648284,2.01046963380583,18.4253779403813,17.6443665557928,7.06479351502504,10.058958310201,0.407357455401265,0,0,0.210441855886474,0.390361328888111,0.689706313300419,0,0.30140963567143,0.884474488967262,0.512454881139399,0.843315521037559,2.58703370739016,0.215567992932842,0,0.703804496655795,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.402619256281115,7.36014819974445,1.9551876352064,0,0,0,0.232236671860439,0,0,0,0.570676878337677,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.339490171550376,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,2.88991061978026,3.5163505977661,1.47541450839008,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0,1.18586333383957,2.89189184779626,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0.604647113929502,0.377210159511796,0,0,0,0.727067458955011,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0.582961673259701,1.11255181206306,0,0.412773735926445,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.335769232728157,0.772758376128762,0.187682475451182,0.36630324853453,0,0,33.3203587144069,24.8575627713876,17.7597609166213,25.2624178045221,24.6629707117431,22.661816921691,23.6257875081132,14.8605997063993,21.7508356312418,17.0860902878101,0.415149390336707,0,0.512200817262403,0.486213434136588,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,1.28367683836726,0.505394423527595,1.2673964994512,1.13175804831646,0.655490552289177,0.576226371643824,0.689225627467359,0,0.927074607558844,0.578727661391115,0.824171801606613,0.883193520806384,1.02860775715625,1.06485483695602,1.1921809497366,0.581385666529314,0.941093804153306,0.507687647350059,0.548783918618318,1.31534855718921,0.950628796921032,1.68342681497322,0.355905054372522,0.886540341380071,0,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,0 | ||
|short_description=p3@Scn2a1 | |short_description=p3@Scn2a1 | ||
}} | }} |
Latest revision as of 20:47, 26 September 2015
Short description: | p3@Scn2a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Scn2a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 28bp_to_uc008jwn.2_5end |
EntrezGene: | Scn2a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data