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FFCP PHASE1:Mm9::chr7:52622138..52622210,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76787
|EntrezGene=76787
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=B8QI35
|UniProt=B8QI35
|association_with_transcript=-54bp_to_ENSMUST00000107779_5end
|association_with_transcript=-54bp_to_ENSMUST00000107779_5end
|cluster_id=chr7:52622138..52622210,-
|description=CAGE_peak_2_at_Ppfia3_5end
|description=CAGE_peak_2_at_Ppfia3_5end
|id=chr7:52622138..52622210,-
|id=chr7:52622138..52622210,-
|ontology_enrichment_celltype=CL:0000540!6.67e-14!33;CL:0000047!6.67e-14!33;CL:0000031!6.67e-14!33;CL:0000404!6.67e-14!33;CL:0000117!1.81e-12!23;CL:0000337!1.81e-12!23;CL:0002319!3.54e-11!43;CL:0000221!5.74e-11!44;CL:0000133!5.74e-11!44;CL:0000393!1.96e-09!39;CL:0000211!1.96e-09!39;CL:0000055!1.88e-07!50
|ontology_enrichment_celltype=CL:0000540!6.67e-14!33;CL:0000047!6.67e-14!33;CL:0000031!6.67e-14!33;CL:0000404!6.67e-14!33;CL:0000117!1.81e-12!23;CL:0000337!1.81e-12!23;CL:0002319!3.54e-11!43;CL:0000221!5.74e-11!44;CL:0000133!5.74e-11!44;CL:0000393!1.96e-09!39;CL:0000211!1.96e-09!39;CL:0000055!1.88e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.27e-17,23;CL:0000337,2.27e-17,23;CL:0000540,4.22e-15,33;CL:0000047,4.22e-15,33;CL:0000031,4.22e-15,33;CL:0000404,4.22e-15,33;CL:0000393,2.41e-11,39;CL:0000211,2.41e-11,39;CL:0002319,2.12e-10,43;CL:0000221,5.87e-10,44;CL:0000133,5.87e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.38e-35!102;UBERON:0000924!3.38e-35!102;UBERON:0006601!3.38e-35!102;UBERON:0001017!7.42e-31!73;UBERON:0005743!7.42e-31!73;UBERON:0002346!8.98e-31!71;UBERON:0003075!8.98e-31!71;UBERON:0007284!8.98e-31!71;UBERON:0000073!1.86e-30!75;UBERON:0001016!1.86e-30!75;UBERON:0000033!1.27e-28!63;UBERON:0001049!2.14e-26!52;UBERON:0005068!2.14e-26!52;UBERON:0006241!2.14e-26!52;UBERON:0007135!2.14e-26!52;UBERON:0000955!3.54e-25!50;UBERON:0006238!3.54e-25!50;UBERON:0002616!1.49e-24!49;UBERON:0003056!1.82e-23!49;UBERON:0003080!2.65e-20!40;UBERON:0002780!1.24e-19!39;UBERON:0001890!1.24e-19!39;UBERON:0006240!1.24e-19!39;UBERON:0002020!3.76e-19!34;UBERON:0002791!4.65e-16!29;UBERON:0003528!4.65e-16!29;UBERON:0001893!4.65e-16!29;UBERON:0000153!2.30e-15!94;UBERON:0007811!5.92e-15!86;UBERON:0000956!3.53e-11!21;UBERON:0001869!3.53e-11!21;UBERON:0000203!3.53e-11!21;UBERON:0002619!4.27e-09!17;UBERON:0002021!6.43e-09!10;UBERON:0000411!6.43e-09!10;UBERON:0001950!6.43e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.47e-39,95;UBERON:0000924,5.47e-39,95;UBERON:0006601,5.47e-39,95;UBERON:0002346,2.44e-38,64;UBERON:0003075,2.44e-38,64;UBERON:0007284,2.44e-38,64;UBERON:0010371,2.96e-38,73;UBERON:0000073,3.58e-37,54;UBERON:0001017,2.61e-36,73;UBERON:0001049,4.76e-35,52;UBERON:0005068,4.76e-35,52;UBERON:0006241,4.76e-35,52;UBERON:0007135,4.76e-35,52;UBERON:0001016,9.34e-35,75;UBERON:0000955,2.31e-30,47;UBERON:0006238,2.31e-30,47;UBERON:0002616,1.66e-29,46;UBERON:0003056,1.15e-28,49;UBERON:0003080,4.66e-26,40;UBERON:0002020,2.99e-25,34;UBERON:0002780,3.99e-25,39;UBERON:0001890,3.99e-25,39;UBERON:0006240,3.99e-25,39;UBERON:0010314,3.25e-22,92;UBERON:0003528,6.59e-21,29;UBERON:0002791,6.59e-21,29;UBERON:0001893,6.59e-21,29;UBERON:0000956,4.45e-14,21;UBERON:0001869,4.45e-14,21;UBERON:0000203,4.45e-14,21;UBERON:0002021,6.13e-12,10;UBERON:0000411,6.13e-12,10;UBERON:0001950,6.13e-12,10;UBERON:0002619,3.62e-11,17;UBERON:0003076,4.05e-09,12;UBERON:0003057,4.05e-09,12;UBERON:0002420,4.41e-08,8;UBERON:0007245,4.41e-08,8;UBERON:0010009,4.41e-08,8;UBERON:0010011,4.41e-08,8;UBERON:0000454,4.41e-08,8;UBERON:0000025,3.90e-07,114
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,7.08107613008592,7.40587370980846,7.60597684207415,0,0,0,0,0,0,0.384218305321555,3.62913643079672,2.8351247049655,3.36519938162211,14.2825492201902,15.6816664075646,2.9397791811589,3.25874601462004,0,15.4162233399144,18.1316020080967,16.4358990584181,8.83638127792299,8.96578907303615,8.33461392890816,22.0554569211091,11.8180148106653,17.2662019987795,11.1958862479994,9.96601765593721,7.64237727883732,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.842666520790511,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0.304465478312141,0.691846491768175,1.20578112442098,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,15.517382241612,17.5935233723302,0,0,0,0,15.5782264981016,21.5025283324754,5.78010019719176,26.7689453096106,32.2201476236216,18.2853479212413,23.0382593556216,0.101839363850316,0,0,1.68353484709179,0.390361328888111,0.689706313300419,1.98068342785884,2.56198190320716,2.65342346690179,2.17793324484245,3.46696380870997,5.43277078551933,0.431135985865684,0.756424320671277,0.175951124163949,0.219195732427575,1.66828349535359,1.39300866608867,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0,0.329119699826961,0,0,0,0.219550115291051,0,19.3466752678997,6.27718135513635,0.330418782983798,0,0.639864751605702,0.232236671860439,0.77320476793256,0,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.974820435595601,0.898819408654221,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.977789858652155,0.509235257325564,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,11.8807436590966,16.7612711826851,0,0,0.94652465824877,2.34263246577983,2.15423397732799,0.477937595905104,0.222798674082394,0.849229592366497,1.21443210502468,1.46127928955656,1.97643888973262,7.71171159412337,0,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,2.04263763452273,0.36012218806262,2.58717367565509,1.50035924522115,1.24138163549592,1.96205699362278,1.15184314421485,2.43571959291679,0,0,0,2.96795255294664,1.45317984026315,2.29189114726992,2.02932984805332,2.9545361954111,0.291480836629851,11.1255181206306,0,0,0,0.188368457004691,0,0,0,0,0,0,0.632671987162271,1.21991680276109,1.18805874903981,1.46361807210128,0.87345025498471,0.539457385539283,1.40510874733071,0.26175594198403,0.259229946583586,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0,0,1.58711268530648,0.221985953374065,0,0,0,0.187682475451182,0,1.92931541171159,0,41.7916363536629,32.2227665555024,36.092417346682,26.2935368985842,29.4585483501376,30.215755895588,29.7009900101995,35.1250538514892,33.9856806738153,32.6188996403647,0.93408612825759,2.79317411380722,1.02440163452481,2.18796045361465,1.25767897576789,0.919217542250071,1.33348036680969,1.03017528619447,1.92551525755089,2.52697211763797,0.760437899670719,0.943131706930381,1.03005658216871,2.11283002936069,1.09127391015665,1.90517476513229,1.62238056322798,1.73618298417335,0.824171801606613,1.03039244094078,1.02860775715625,1.06485483695602,1.66905332963125,0.581385666529314,1.31753132581463,1.18460451048347,0.914639864363863,1.05227884575137,2.17286582153379,0,1.54225523561426,1.37906275325789,0,1.23949472948773,0.964533054905707,4.49659040288303,1.40358965067245,1.07435527024149,0.956441660344217,0.661774257358546,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,5.10259740906419,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.439372365468944,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,7.08107613008592,7.40587370980846,7.60597684207415,0,0,0,0,0,0,0.384218305321555,3.62913643079672,2.8351247049655,3.36519938162211,14.2825492201902,15.6816664075646,2.9397791811589,3.25874601462004,0,15.4162233399144,18.1316020080967,16.4358990584181,8.83638127792299,8.96578907303615,8.33461392890816,22.0554569211091,11.8180148106653,17.2662019987795,11.1958862479994,9.96601765593721,7.64237727883732,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.842666520790511,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0.304465478312141,0.691846491768175,1.20578112442098,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,15.517382241612,17.5935233723302,0,0,0,0,15.5782264981016,21.5025283324754,5.78010019719176,26.7689453096106,32.2201476236216,18.2853479212413,23.0382593556216,0.101839363850316,0,0,1.68353484709179,0.390361328888111,0.689706313300419,1.98068342785884,2.56198190320716,2.65342346690179,2.17793324484245,3.46696380870997,5.43277078551933,0.431135985865684,0.756424320671277,0.175951124163949,0.219195732427575,1.66828349535359,1.39300866608867,0.61734640922383,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0,0.329119699826961,0,0,0,0.219550115291051,0,19.3466752678997,6.27718135513635,0.330418782983798,0,0.639864751605702,0.232236671860439,0.77320476793256,0,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.974820435595601,0.898819408654221,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.977789858652155,0.509235257325564,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,11.8807436590966,16.7612711826851,0,0,0.94652465824877,2.34263246577983,2.15423397732799,0.477937595905104,0.222798674082394,0.849229592366497,1.21443210502468,1.46127928955656,1.97643888973262,7.71171159412337,0,0.35613120733451,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,2.04263763452273,0.36012218806262,2.58717367565509,1.50035924522115,1.24138163549592,1.96205699362278,1.15184314421485,2.43571959291679,0,0,0,2.96795255294664,1.45317984026315,2.29189114726992,2.02932984805332,2.9545361954111,0.291480836629851,11.1255181206306,0,0,0,0.188368457004691,0,0,0,0,0,0,0.632671987162271,1.21991680276109,1.18805874903981,1.46361807210128,0.87345025498471,0.539457385539283,1.40510874733071,0.26175594198403,0.259229946583586,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0,0,1.58711268530648,0.221985953374065,0,0,0,0.187682475451182,0,1.92931541171159,0,41.7916363536629,32.2227665555024,36.092417346682,26.2935368985842,29.4585483501376,30.215755895588,29.7009900101995,35.1250538514892,33.9856806738153,32.6188996403647,0.93408612825759,2.79317411380722,1.02440163452481,2.18796045361465,1.25767897576789,0.919217542250071,1.33348036680969,1.03017528619447,1.92551525755089,2.52697211763797,0.760437899670719,0.943131706930381,1.03005658216871,2.11283002936069,1.09127391015665,1.90517476513229,1.62238056322798,1.73618298417335,0.824171801606613,1.03039244094078,1.02860775715625,1.06485483695602,1.66905332963125,0.581385666529314,1.31753132581463,1.18460451048347,0.914639864363863,1.05227884575137,2.17286582153379,0,1.54225523561426,1.37906275325789,0,1.23949472948773,0.964533054905707,4.49659040288303,1.40358965067245,1.07435527024149,0.956441660344217,0.661774257358546,0.231867835620421
|short_description=p2@Ppfia3
|short_description=p2@Ppfia3
}}
}}

Latest revision as of 21:07, 26 September 2015

Short description:p2@Ppfia3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ppfia3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -54bp_to_ENSMUST00000107779_5end
EntrezGene:Ppfia3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ppfia3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I217.59
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A415.58
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D526.77
cortex, neonate N30.CNhs11107.1392-42F232.22
diencephalon, adult.CNhs10482.20-12F218.29
diencephalon, neonate N30.CNhs11201.1388-42B223.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.88
medulla oblongata, neonate N30.CNhs11200.1396-42A316.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.79
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.09
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.62
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.27e-1723
neuroblast (sensu Vertebrata)2.27e-1723
neuron4.22e-1533
neuronal stem cell4.22e-1533
neuroblast4.22e-1533
electrically signaling cell4.22e-1533
electrically responsive cell2.41e-1139
electrically active cell2.41e-1139
neural cell2.12e-1043
ectodermal cell5.87e-1044
neurectodermal cell5.87e-1044

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure5.47e-3995
ectoderm5.47e-3995
presumptive ectoderm5.47e-3995
neurectoderm2.44e-3864
neural plate2.44e-3864
presumptive neural plate2.44e-3864
ecto-epithelium2.96e-3873
regional part of nervous system3.58e-3754
central nervous system2.61e-3673
neural tube4.76e-3552
neural rod4.76e-3552
future spinal cord4.76e-3552
neural keel4.76e-3552
nervous system9.34e-3575
brain2.31e-3047
future brain2.31e-3047
regional part of brain1.66e-2946
pre-chordal neural plate1.15e-2849
anterior neural tube4.66e-2640
gray matter2.99e-2534
regional part of forebrain3.99e-2539
forebrain3.99e-2539
future forebrain3.99e-2539
structure with developmental contribution from neural crest3.25e-2292
brain grey matter6.59e-2129
regional part of telencephalon6.59e-2129
telencephalon6.59e-2129
cerebral cortex4.45e-1421
cerebral hemisphere4.45e-1421
pallium4.45e-1421
occipital lobe6.13e-1210
visual cortex6.13e-1210
neocortex6.13e-1210
regional part of cerebral cortex3.62e-1117
posterior neural tube4.05e-0912
chordal neural plate4.05e-0912
basal ganglion4.41e-088
nuclear complex of neuraxis4.41e-088
aggregate regional part of brain4.41e-088
collection of basal ganglia4.41e-088
cerebral subcortex4.41e-088
tube3.90e-07114
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