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FFCP PHASE1:Mm9::chr1:25285659..25285679,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=210933
|EntrezGene=210933
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BJ13
|UniProt=Q8BJ13
|association_with_transcript=0bp_to_ENSMUST00000126626,ENSMUST00000134022_5end
|association_with_transcript=0bp_to_ENSMUST00000126626,ENSMUST00000134022_5end
|cluster_id=chr1:25285659..25285679,-
|description=CAGE_peak_2_at_Bai3_5end
|description=CAGE_peak_2_at_Bai3_5end
|id=chr1:25285659..25285679,-
|id=chr1:25285659..25285679,-
|ontology_enrichment_celltype=CL:0000540!4.25e-17!33;CL:0000047!4.25e-17!33;CL:0000031!4.25e-17!33;CL:0000404!4.25e-17!33;CL:0000117!5.84e-17!23;CL:0000337!5.84e-17!23;CL:0000393!1.47e-12!39;CL:0000211!1.47e-12!39;CL:0000221!2.16e-10!44;CL:0000133!2.16e-10!44;CL:0002319!2.60e-10!43;CL:0000055!2.27e-07!50
|ontology_enrichment_celltype=CL:0000540!4.25e-17!33;CL:0000047!4.25e-17!33;CL:0000031!4.25e-17!33;CL:0000404!4.25e-17!33;CL:0000117!5.84e-17!23;CL:0000337!5.84e-17!23;CL:0000393!1.47e-12!39;CL:0000211!1.47e-12!39;CL:0000221!2.16e-10!44;CL:0000133!2.16e-10!44;CL:0002319!2.60e-10!43;CL:0000055!2.27e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.21e-22,23;CL:0000337,4.21e-22,23;CL:0000540,6.60e-17,33;CL:0000047,6.60e-17,33;CL:0000031,6.60e-17,33;CL:0000404,6.60e-17,33;CL:0000393,5.49e-13,39;CL:0000211,5.49e-13,39;CL:0002319,5.16e-11,43;CL:0000221,1.40e-10,44;CL:0000133,1.40e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.27e-31!73;UBERON:0005743!1.27e-31!73;UBERON:0002346!3.37e-30!71;UBERON:0003075!3.37e-30!71;UBERON:0007284!3.37e-30!71;UBERON:0000073!4.47e-30!75;UBERON:0001016!4.47e-30!75;UBERON:0001049!3.96e-28!52;UBERON:0005068!3.96e-28!52;UBERON:0006241!3.96e-28!52;UBERON:0007135!3.96e-28!52;UBERON:0000955!8.66e-27!50;UBERON:0006238!8.66e-27!50;UBERON:0000033!2.19e-26!63;UBERON:0004121!2.90e-26!102;UBERON:0000924!2.90e-26!102;UBERON:0006601!2.90e-26!102;UBERON:0002616!7.46e-26!49;UBERON:0003056!1.97e-24!49;UBERON:0002020!1.08e-23!34;UBERON:0003080!1.23e-22!40;UBERON:0002780!7.18e-22!39;UBERON:0001890!7.18e-22!39;UBERON:0006240!7.18e-22!39;UBERON:0002791!4.65e-20!29;UBERON:0003528!4.65e-20!29;UBERON:0001893!4.65e-20!29;UBERON:0000956!2.90e-14!21;UBERON:0001869!2.90e-14!21;UBERON:0000203!2.90e-14!21;UBERON:0007811!1.23e-13!86;UBERON:0002619!3.46e-11!17;UBERON:0000153!7.59e-11!94;UBERON:0002021!2.73e-10!10;UBERON:0000411!2.73e-10!10;UBERON:0001950!2.73e-10!10;UBERON:0002420!5.54e-07!8;UBERON:0007245!5.54e-07!8;UBERON:0010009!5.54e-07!8;UBERON:0010011!5.54e-07!8;UBERON:0000454!5.54e-07!8
|ontology_enrichment_uberon=UBERON:0001017!1.27e-31!73;UBERON:0005743!1.27e-31!73;UBERON:0002346!3.37e-30!71;UBERON:0003075!3.37e-30!71;UBERON:0007284!3.37e-30!71;UBERON:0000073!4.47e-30!75;UBERON:0001016!4.47e-30!75;UBERON:0001049!3.96e-28!52;UBERON:0005068!3.96e-28!52;UBERON:0006241!3.96e-28!52;UBERON:0007135!3.96e-28!52;UBERON:0000955!8.66e-27!50;UBERON:0006238!8.66e-27!50;UBERON:0000033!2.19e-26!63;UBERON:0004121!2.90e-26!102;UBERON:0000924!2.90e-26!102;UBERON:0006601!2.90e-26!102;UBERON:0002616!7.46e-26!49;UBERON:0003056!1.97e-24!49;UBERON:0002020!1.08e-23!34;UBERON:0003080!1.23e-22!40;UBERON:0002780!7.18e-22!39;UBERON:0001890!7.18e-22!39;UBERON:0006240!7.18e-22!39;UBERON:0002791!4.65e-20!29;UBERON:0003528!4.65e-20!29;UBERON:0001893!4.65e-20!29;UBERON:0000956!2.90e-14!21;UBERON:0001869!2.90e-14!21;UBERON:0000203!2.90e-14!21;UBERON:0007811!1.23e-13!86;UBERON:0002619!3.46e-11!17;UBERON:0000153!7.59e-11!94;UBERON:0002021!2.73e-10!10;UBERON:0000411!2.73e-10!10;UBERON:0001950!2.73e-10!10;UBERON:0002420!5.54e-07!8;UBERON:0007245!5.54e-07!8;UBERON:0010009!5.54e-07!8;UBERON:0010011!5.54e-07!8;UBERON:0000454!5.54e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.66e-34,54;UBERON:0001017,7.28e-33,73;UBERON:0001049,2.81e-32,52;UBERON:0005068,2.81e-32,52;UBERON:0006241,2.81e-32,52;UBERON:0007135,2.81e-32,52;UBERON:0002020,1.21e-31,34;UBERON:0001016,1.64e-31,75;UBERON:0002346,4.79e-31,64;UBERON:0003075,4.79e-31,64;UBERON:0007284,4.79e-31,64;UBERON:0000955,1.18e-27,47;UBERON:0006238,1.18e-27,47;UBERON:0003528,8.89e-27,29;UBERON:0002791,8.89e-27,29;UBERON:0001893,8.89e-27,29;UBERON:0002616,1.75e-26,46;UBERON:0004121,2.96e-26,95;UBERON:0000924,2.96e-26,95;UBERON:0006601,2.96e-26,95;UBERON:0010371,3.37e-25,73;UBERON:0003080,1.54e-24,40;UBERON:0003056,4.72e-24,49;UBERON:0002780,1.46e-23,39;UBERON:0001890,1.46e-23,39;UBERON:0006240,1.46e-23,39;UBERON:0000956,5.12e-19,21;UBERON:0001869,5.12e-19,21;UBERON:0000203,5.12e-19,21;UBERON:0010314,9.93e-17,92;UBERON:0002619,6.80e-15,17;UBERON:0002021,3.36e-13,10;UBERON:0000411,3.36e-13,10;UBERON:0001950,3.36e-13,10;UBERON:0002420,8.47e-09,8;UBERON:0007245,8.47e-09,8;UBERON:0010009,8.47e-09,8;UBERON:0010011,8.47e-09,8;UBERON:0000454,8.47e-09,8;UBERON:0003076,5.20e-08,12;UBERON:0003057,5.20e-08,12;UBERON:0000025,2.77e-07,114;UBERON:0002240,9.57e-07,6;UBERON:0005174,9.57e-07,6;UBERON:0001137,9.57e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66486090406874,7.93486468908049,6.33831403506179,0,0,0,0,0,0,0,8.70992743391212,6.34527910158946,9.25429829946081,4.57041575046086,5.52171352379034,4.40966877173835,3.83381884072945,3.67687514644008,3.30347642998166,8.17198963745201,6.60508093001847,8.5726087024626,10.0636407962651,10.4182674111352,2.23346399201105,2.8138130501584,6.1119299110724,7.36571463684169,6.69146899755784,6.71038004971082,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,9.07620470735796,7.33063473847093,0,0,0,0,6.89036941262184,15.0975198930147,5.27748278874031,14.4274185759589,14.3200656104985,6.02585329222724,8.4365456795234,0,0,0,0.841767423545896,0.260240885925407,0,0.540186389416048,1.20563854268572,1.7009124787832,1.66547836370305,1.12442069471675,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,22.9216043934899,7.40913209130848,0,0,0,0,0.902072229254653,0.403367049246685,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.81308047821288,0,0,1.57754109708128,0.390438744296638,0.861693590931196,0.477937595905104,0.445597348164788,0.566153061577665,0,1.75353514746787,1.97643888973262,16.708708453934,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,2.04263763452273,0,0.129358683782755,0.428674070063185,1.41872186913819,0.356737635204141,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.86404272657441,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0253218620656,29.0004898999521,27.498984645091,23.2001796163978,21.2375581128899,15.107877947794,14.8504950050997,17.1122057225204,14.0474146785103,15.0150490408028,0.207574695168353,2.79317411380722,1.53660245178721,1.45864030240976,1.88651846365184,1.2869045591501,2.00022055021454,2.06035057238894,1.28367683836726,1.51618327058278,4.05566879824384,2.45214243801899,1.31098110457835,1.34452820050225,1.32101578597911,1.42888107384922,1.39061191133827,0.77163688185482,2.06042950401653,1.17759136107518,1.02860775715625,1.4198064492747,1.1921809497366,2.18019624948493,1.59985946706062,1.18460451048347,2.19513567447327,1.57841826862706,2.17286582153379,1.68342681497322,1.30498519936592,1.57607171800902,2.04615521584845,1.54936841185966,0.771626443924566,3.99696924700713,0.701794825336225,0.214871054048298,0.57386499620653,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66486090406874,7.93486468908049,6.33831403506179,0,0,0,0,0,0,0,8.70992743391212,6.34527910158946,9.25429829946081,4.57041575046086,5.52171352379034,4.40966877173835,3.83381884072945,3.67687514644008,3.30347642998166,8.17198963745201,6.60508093001847,8.5726087024626,10.0636407962651,10.4182674111352,2.23346399201105,2.8138130501584,6.1119299110724,7.36571463684169,6.69146899755784,6.71038004971082,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,9.07620470735796,7.33063473847093,0,0,0,0,6.89036941262184,15.0975198930147,5.27748278874031,14.4274185759589,14.3200656104985,6.02585329222724,8.4365456795234,0,0,0,0.841767423545896,0.260240885925407,0,0.540186389416048,1.20563854268572,1.7009124787832,1.66547836370305,1.12442069471675,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,22.9216043934899,7.40913209130848,0,0,0,0,0.902072229254653,0.403367049246685,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0,0.38992817423824,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,2.81308047821288,0,0,1.57754109708128,0.390438744296638,0.861693590931196,0.477937595905104,0.445597348164788,0.566153061577665,0,1.75353514746787,1.97643888973262,16.708708453934,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,2.04263763452273,0,0.129358683782755,0.428674070063185,1.41872186913819,0.356737635204141,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.86404272657441,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0253218620656,29.0004898999521,27.498984645091,23.2001796163978,21.2375581128899,15.107877947794,14.8504950050997,17.1122057225204,14.0474146785103,15.0150490408028,0.207574695168353,2.79317411380722,1.53660245178721,1.45864030240976,1.88651846365184,1.2869045591501,2.00022055021454,2.06035057238894,1.28367683836726,1.51618327058278,4.05566879824384,2.45214243801899,1.31098110457835,1.34452820050225,1.32101578597911,1.42888107384922,1.39061191133827,0.77163688185482,2.06042950401653,1.17759136107518,1.02860775715625,1.4198064492747,1.1921809497366,2.18019624948493,1.59985946706062,1.18460451048347,2.19513567447327,1.57841826862706,2.17286582153379,1.68342681497322,1.30498519936592,1.57607171800902,2.04615521584845,1.54936841185966,0.771626443924566,3.99696924700713,0.701794825336225,0.214871054048298,0.57386499620653,0,0.231867835620421
|short_description=p2@Bai3
|short_description=p2@Bai3
}}
}}

Latest revision as of 01:27, 27 September 2015

Short description:p2@Bai3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Bai3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000126626, ENSMUST00000134022_5end
EntrezGene:Bai3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Bai3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.71
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D514.43
cortex, neonate N30.CNhs11107.1392-42F214.32
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B28.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A327.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.02
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.21e-2223
neuroblast (sensu Vertebrata)4.21e-2223
neuron6.60e-1733
neuronal stem cell6.60e-1733
neuroblast6.60e-1733
electrically signaling cell6.60e-1733
electrically responsive cell5.49e-1339
electrically active cell5.49e-1339
neural cell5.16e-1143
ectodermal cell1.40e-1044
neurectodermal cell1.40e-1044

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.66e-3454
central nervous system7.28e-3373
neural tube2.81e-3252
neural rod2.81e-3252
future spinal cord2.81e-3252
neural keel2.81e-3252
gray matter1.21e-3134
nervous system1.64e-3175
neurectoderm4.79e-3164
neural plate4.79e-3164
presumptive neural plate4.79e-3164
brain1.18e-2747
future brain1.18e-2747
brain grey matter8.89e-2729
regional part of telencephalon8.89e-2729
telencephalon8.89e-2729
regional part of brain1.75e-2646
ectoderm-derived structure2.96e-2695
ectoderm2.96e-2695
presumptive ectoderm2.96e-2695
ecto-epithelium3.37e-2573
anterior neural tube1.54e-2440
pre-chordal neural plate4.72e-2449
regional part of forebrain1.46e-2339
forebrain1.46e-2339
future forebrain1.46e-2339
cerebral cortex5.12e-1921
cerebral hemisphere5.12e-1921
pallium5.12e-1921
structure with developmental contribution from neural crest9.93e-1792
regional part of cerebral cortex6.80e-1517
occipital lobe3.36e-1310
visual cortex3.36e-1310
neocortex3.36e-1310
basal ganglion8.47e-098
nuclear complex of neuraxis8.47e-098
aggregate regional part of brain8.47e-098
collection of basal ganglia8.47e-098
cerebral subcortex8.47e-098
posterior neural tube5.20e-0812
chordal neural plate5.20e-0812
tube2.77e-07114
spinal cord9.57e-076
dorsal region element9.57e-076
dorsum9.57e-076
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