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FFCP PHASE1:Mm9::chr2:92755288..92755299,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=80976
|EntrezGene=80976
|HGNC=
|HGNC=
|MCL_coexpression_id=1785
|TSSclassifier=NA
|UniProt=A2AGX5,Q9EQT6
|UniProt=A2AGX5,Q9EQT6
|association_with_transcript=30bp_to_NM_030725,uc008lfn.1_5end
|association_with_transcript=30bp_to_NM_030725,uc008lfn.1_5end
|cluster_id=chr2:92755288..92755299,+
|description=CAGE_peak_2_at_Syt13_5end
|description=CAGE_peak_2_at_Syt13_5end
|id=chr2:92755288..92755299,+
|id=chr2:92755288..92755299,+
|ontology_enrichment_celltype=CL:0000117!3.15e-08!23;CL:0000337!3.15e-08!23
|ontology_enrichment_celltype=CL:0000117!3.15e-08!23;CL:0000337!3.15e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-10,23;CL:0000337,1.05e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.22e-17!52;UBERON:0005068!3.22e-17!52;UBERON:0006241!3.22e-17!52;UBERON:0007135!3.22e-17!52;UBERON:0000033!1.17e-16!63;UBERON:0000955!2.14e-16!50;UBERON:0006238!2.14e-16!50;UBERON:0007811!3.05e-16!86;UBERON:0002616!7.11e-16!49;UBERON:0000153!6.46e-15!94;UBERON:0003056!2.35e-14!49;UBERON:0002346!3.47e-14!71;UBERON:0003075!3.47e-14!71;UBERON:0007284!3.47e-14!71;UBERON:0001017!9.73e-14!73;UBERON:0005743!9.73e-14!73;UBERON:0003080!4.10e-13!40;UBERON:0000073!7.87e-13!75;UBERON:0001016!7.87e-13!75;UBERON:0002780!1.35e-12!39;UBERON:0001890!1.35e-12!39;UBERON:0006240!1.35e-12!39;UBERON:0002020!8.60e-12!34;UBERON:0004121!1.45e-10!102;UBERON:0000924!1.45e-10!102;UBERON:0006601!1.45e-10!102;UBERON:0002791!3.26e-09!29;UBERON:0003528!3.26e-09!29;UBERON:0001893!3.26e-09!29;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10
|ontology_enrichment_uberon=UBERON:0001049!3.22e-17!52;UBERON:0005068!3.22e-17!52;UBERON:0006241!3.22e-17!52;UBERON:0007135!3.22e-17!52;UBERON:0000033!1.17e-16!63;UBERON:0000955!2.14e-16!50;UBERON:0006238!2.14e-16!50;UBERON:0007811!3.05e-16!86;UBERON:0002616!7.11e-16!49;UBERON:0000153!6.46e-15!94;UBERON:0003056!2.35e-14!49;UBERON:0002346!3.47e-14!71;UBERON:0003075!3.47e-14!71;UBERON:0007284!3.47e-14!71;UBERON:0001017!9.73e-14!73;UBERON:0005743!9.73e-14!73;UBERON:0003080!4.10e-13!40;UBERON:0000073!7.87e-13!75;UBERON:0001016!7.87e-13!75;UBERON:0002780!1.35e-12!39;UBERON:0001890!1.35e-12!39;UBERON:0006240!1.35e-12!39;UBERON:0002020!8.60e-12!34;UBERON:0004121!1.45e-10!102;UBERON:0000924!1.45e-10!102;UBERON:0006601!1.45e-10!102;UBERON:0002791!3.26e-09!29;UBERON:0003528!3.26e-09!29;UBERON:0001893!3.26e-09!29;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.29e-25,54;UBERON:0001049,9.41e-23,52;UBERON:0005068,9.41e-23,52;UBERON:0006241,9.41e-23,52;UBERON:0007135,9.41e-23,52;UBERON:0001017,3.42e-21,73;UBERON:0001016,3.61e-20,75;UBERON:0002346,1.04e-19,64;UBERON:0003075,1.04e-19,64;UBERON:0007284,1.04e-19,64;UBERON:0000955,9.69e-19,47;UBERON:0006238,9.69e-19,47;UBERON:0002616,5.37e-18,46;UBERON:0002020,1.84e-16,34;UBERON:0010371,2.41e-16,73;UBERON:0003080,2.65e-16,40;UBERON:0002780,1.50e-15,39;UBERON:0001890,1.50e-15,39;UBERON:0006240,1.50e-15,39;UBERON:0004121,1.91e-15,95;UBERON:0000924,1.91e-15,95;UBERON:0006601,1.91e-15,95;UBERON:0003056,4.08e-15,49;UBERON:0003528,1.42e-12,29;UBERON:0002791,1.42e-12,29;UBERON:0001893,1.42e-12,29;UBERON:0002021,2.05e-11,10;UBERON:0000411,2.05e-11,10;UBERON:0001950,2.05e-11,10;UBERON:0010314,5.78e-10,92;UBERON:0002420,2.41e-08,8;UBERON:0007245,2.41e-08,8;UBERON:0010009,2.41e-08,8;UBERON:0010011,2.41e-08,8;UBERON:0000454,2.41e-08,8;UBERON:0002619,1.65e-07,17;UBERON:0003076,3.76e-07,12;UBERON:0003057,3.76e-07,12
|phase1_expression=1.92178616525753,0,0,0,0,1.17515490338323,0.934450562382103,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,5.05791152148994,3.1739458756322,3.1691570175309,0.338844532069132,0,2.6996991518442,1.97773272513395,4.9733608046227,0,0,0.311068836925433,0,0.210324961351382,6.56997264128748,6.62605622854841,0.122490799214954,0.0958454710182364,0.919218786610021,5.50579404996943,10.4703617229854,10.5988507946808,16.4857859662742,15.186948838,15.6274011167028,10.8881369610539,6.75315132038016,6.26472815884921,6.18720029494702,4.8406371471695,2.42319279572891,0,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0,0,0,0.704217098883403,1.28326477414318,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.34255163915718,1.03575153458869,0,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,5.5628351432194,4.60782754989601,0.255457055208591,0,0,0,4.49371918214468,2.74500361691176,1.13088916901578,11.1247564923057,9.46147192122223,6.2336413367868,4.70499662896497,2.13862664085664,0,0,0.631325567659422,0.520481771850815,1.37941262660084,2.52086981727489,1.35634336052144,0.680364991513279,0.640568601424249,1.21812241927647,0.517406741478031,0,0.756424320671277,0.527853372491847,0.657587197282725,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,6.9395683026162,1.02904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,1.33426826306922,0.760902504450237,0,0.658795818896044,1.00534083520108,0.397912944082302,0.974820435595601,0.898819408654221,0.432276099749388,0.597423819763102,0.379335801906163,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.631222379012867,1.26473074248515,0,0.156998727841375,0.493588655687202,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0.390267295715598,0,0,0,0,0,0,0,0,0.491764273019036,0,3.05046120976805,4.10240903072711,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,3.53453448063988,0.567760340833074,2.84904965867608,0.977321756121456,0.164970122972535,0,1.69946445308487,3.32555912661226,3.58349651536206,3.2483208216885,2.15204603560749,5.16856586336442,2.54473610634254,2.85197902707777,0.316036757935816,1.05418608574999,3.09406629744561,8.85142974959849,0.540183282093931,0.517434735131018,0.857348140126369,1.95074257006501,3.0322698992352,2.79733335023606,3.95804433848979,0.469343416127421,1.27099242518292,0,0.49465875882444,0.322928853391811,0.241251699712623,0.238744688006273,0,2.04036585640896,2.96680483216816,0,0.619160603889667,0,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0,0.138199973804424,0.954670618015114,0.158167996790568,1.21991680276109,1.29606408986162,0.418176592028937,0.87345025498471,0.809186078308924,0.991841468704031,1.57053565190418,1.16653475962614,0,0,0.598066184175915,0.66183396182839,2.72231663681667,1.93739735216597,1.520605129417,1.5256441023948,1.8228613878153,0.838874755405687,0.241584120826006,0.288030006257865,1.89606672376907,0,0.205421914329655,0.25984164595559,1.61124026100733,1.78813219303138,1.68273629327956,1.32920574457119,2.22126189885925,1.21930890648,1.10908803650525,1.65678397257579,2.50150788264857,1.8700304349051,0,0.443971906748129,0,0.167884616364078,0,0.187682475451182,0.549454872801795,0,0,9.03602948187307,7.82552902062201,6.87474616127276,11.1704568523397,13.0165678756422,9.82012066606611,10.1253375034771,9.45674526770863,9.06284817968409,8.28416498802912,0.207574695168353,1.59609949360412,0.853668028770671,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0.412070114477788,1.60459604795908,1.01078884705519,0.760437899670719,0.754505365544305,0.655490552289177,0.640251524048693,0.804096565378586,0.476293691283074,1.15884325944855,1.15745532278223,1.23625770240992,0.883193520806384,0.685738504770831,0.887379030796687,0.953744759789284,0.581385666529314,0.376437521661322,0.338458431566706,0,0.526139422875686,0,0,0.474540072496697,0.788035859004508,0,0.929621047115796,0.771626443924566,1.49886346762768,1.16965804222704,1.28922632428979,0.956441660344217,0.220591419119515,0
|phase1_expression=1.92178616525753,0,0,0,0,1.17515490338323,0.934450562382103,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0.286533439938757,0,5.05791152148994,3.1739458756322,3.1691570175309,0.338844532069132,0,2.6996991518442,1.97773272513395,4.9733608046227,0,0,0.311068836925433,0,0.210324961351382,6.56997264128748,6.62605622854841,0.122490799214954,0.0958454710182364,0.919218786610021,5.50579404996943,10.4703617229854,10.5988507946808,16.4857859662742,15.186948838,15.6274011167028,10.8881369610539,6.75315132038016,6.26472815884921,6.18720029494702,4.8406371471695,2.42319279572891,0,0.0755715601067855,0,0,0,0,0,0,0.983110940922263,0,0,0,0.704217098883403,1.28326477414318,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.34255163915718,1.03575153458869,0,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,5.5628351432194,4.60782754989601,0.255457055208591,0,0,0,4.49371918214468,2.74500361691176,1.13088916901578,11.1247564923057,9.46147192122223,6.2336413367868,4.70499662896497,2.13862664085664,0,0,0.631325567659422,0.520481771850815,1.37941262660084,2.52086981727489,1.35634336052144,0.680364991513279,0.640568601424249,1.21812241927647,0.517406741478031,0,0.756424320671277,0.527853372491847,0.657587197282725,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,6.9395683026162,1.02904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,1.33426826306922,0.760902504450237,0,0.658795818896044,1.00534083520108,0.397912944082302,0.974820435595601,0.898819408654221,0.432276099749388,0.597423819763102,0.379335801906163,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.631222379012867,1.26473074248515,0,0.156998727841375,0.493588655687202,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.502518772325447,0,0.390267295715598,0,0,0,0,0,0,0,0,0.491764273019036,0,3.05046120976805,4.10240903072711,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0,3.53453448063988,0.567760340833074,2.84904965867608,0.977321756121456,0.164970122972535,0,1.69946445308487,3.32555912661226,3.58349651536206,3.2483208216885,2.15204603560749,5.16856586336442,2.54473610634254,2.85197902707777,0.316036757935816,1.05418608574999,3.09406629744561,8.85142974959849,0.540183282093931,0.517434735131018,0.857348140126369,1.95074257006501,3.0322698992352,2.79733335023606,3.95804433848979,0.469343416127421,1.27099242518292,0,0.49465875882444,0.322928853391811,0.241251699712623,0.238744688006273,0,2.04036585640896,2.96680483216816,0,0.619160603889667,0,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0,0.138199973804424,0.954670618015114,0.158167996790568,1.21991680276109,1.29606408986162,0.418176592028937,0.87345025498471,0.809186078308924,0.991841468704031,1.57053565190418,1.16653475962614,0,0,0.598066184175915,0.66183396182839,2.72231663681667,1.93739735216597,1.520605129417,1.5256441023948,1.8228613878153,0.838874755405687,0.241584120826006,0.288030006257865,1.89606672376907,0,0.205421914329655,0.25984164595559,1.61124026100733,1.78813219303138,1.68273629327956,1.32920574457119,2.22126189885925,1.21930890648,1.10908803650525,1.65678397257579,2.50150788264857,1.8700304349051,0,0.443971906748129,0,0.167884616364078,0,0.187682475451182,0.549454872801795,0,0,9.03602948187307,7.82552902062201,6.87474616127276,11.1704568523397,13.0165678756422,9.82012066606611,10.1253375034771,9.45674526770863,9.06284817968409,8.28416498802912,0.207574695168353,1.59609949360412,0.853668028770671,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0.412070114477788,1.60459604795908,1.01078884705519,0.760437899670719,0.754505365544305,0.655490552289177,0.640251524048693,0.804096565378586,0.476293691283074,1.15884325944855,1.15745532278223,1.23625770240992,0.883193520806384,0.685738504770831,0.887379030796687,0.953744759789284,0.581385666529314,0.376437521661322,0.338458431566706,0,0.526139422875686,0,0,0.474540072496697,0.788035859004508,0,0.929621047115796,0.771626443924566,1.49886346762768,1.16965804222704,1.28922632428979,0.956441660344217,0.220591419119515,0
|short_description=p2@Syt13
|short_description=p2@Syt13
}}
}}

Latest revision as of 03:29, 27 September 2015

Short description:p2@Syt13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Syt13_5end
Coexpression cluster:MCL_coexpression_mm9:1785
Association with transcript: 30bp_to_NM_030725, uc008lfn.1_5end
EntrezGene:Syt13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Syt13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.06
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.49
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D511.12
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.05e-1023
neuroblast (sensu Vertebrata)1.05e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.29e-2554
neural tube9.41e-2352
neural rod9.41e-2352
future spinal cord9.41e-2352
neural keel9.41e-2352
central nervous system3.42e-2173
nervous system3.61e-2075
neurectoderm1.04e-1964
neural plate1.04e-1964
presumptive neural plate1.04e-1964
brain9.69e-1947
future brain9.69e-1947
regional part of brain5.37e-1846
gray matter1.84e-1634
ecto-epithelium2.41e-1673
anterior neural tube2.65e-1640
regional part of forebrain1.50e-1539
forebrain1.50e-1539
future forebrain1.50e-1539
ectoderm-derived structure1.91e-1595
ectoderm1.91e-1595
presumptive ectoderm1.91e-1595
pre-chordal neural plate4.08e-1549
brain grey matter1.42e-1229
regional part of telencephalon1.42e-1229
telencephalon1.42e-1229
occipital lobe2.05e-1110
visual cortex2.05e-1110
neocortex2.05e-1110
structure with developmental contribution from neural crest5.78e-1092
basal ganglion2.41e-088
nuclear complex of neuraxis2.41e-088
aggregate regional part of brain2.41e-088
collection of basal ganglia2.41e-088
cerebral subcortex2.41e-088
regional part of cerebral cortex1.65e-0717
posterior neural tube3.76e-0712
chordal neural plate3.76e-0712
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