Personal tools

FFCP PHASE1:Mm9::chr1:42752574..42752621,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|EntrezGene=NA
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18993
|HGNC=
|HGNC=
|MCL_coexpression_id=100
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr1:42752574..42752621,+
|cluster_id=chr1:42752574..42752621,+
|description=CAGE_peak_4_at_Pou3f3_5end
|id=chr1:42752574..42752621,+
|id=chr1:42752574..42752621,+
|ontology_enrichment_celltype=CL:0000221!1.05e-20!44;CL:0000133!1.05e-20!44;CL:0002319!3.12e-20!43;CL:0000540!3.43e-16!33;CL:0000047!3.43e-16!33;CL:0000031!3.43e-16!33;CL:0000404!3.43e-16!33;CL:0000055!8.40e-15!50;CL:0000117!3.20e-14!23;CL:0000337!3.20e-14!23;CL:0000393!1.28e-11!39;CL:0000211!1.28e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.87e-21,44;CL:0000133,3.87e-21,44;CL:0002319,1.38e-20,43;CL:0000540,2.57e-17,33;CL:0000047,2.57e-17,33;CL:0000031,2.57e-17,33;CL:0000404,2.57e-17,33;CL:0000117,1.38e-16,23;CL:0000337,1.38e-16,23;CL:0000393,1.25e-12,39;CL:0000211,1.25e-12,39;CL:0002321,1.74e-07,70;CL:0002609,8.50e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.26e-32!73;UBERON:0005743!3.26e-32!73;UBERON:0000073!4.86e-32!75;UBERON:0001016!4.86e-32!75;UBERON:0004121!1.63e-26!102;UBERON:0000924!1.63e-26!102;UBERON:0006601!1.63e-26!102;UBERON:0002346!2.92e-22!71;UBERON:0003075!2.92e-22!71;UBERON:0007284!2.92e-22!71;UBERON:0001049!3.79e-22!52;UBERON:0005068!3.79e-22!52;UBERON:0006241!3.79e-22!52;UBERON:0007135!3.79e-22!52;UBERON:0000033!8.62e-22!63;UBERON:0000955!1.96e-21!50;UBERON:0006238!1.96e-21!50;UBERON:0002616!4.47e-21!49;UBERON:0002020!5.76e-21!34;UBERON:0002791!6.60e-19!29;UBERON:0003528!6.60e-19!29;UBERON:0001893!6.60e-19!29;UBERON:0003056!3.82e-18!49;UBERON:0003080!2.11e-17!40;UBERON:0002780!5.15e-17!39;UBERON:0001890!5.15e-17!39;UBERON:0006240!5.15e-17!39;UBERON:0000956!1.16e-14!21;UBERON:0001869!1.16e-14!21;UBERON:0000203!1.16e-14!21;UBERON:0002619!7.94e-12!17;UBERON:0007811!7.08e-11!86;UBERON:0000153!1.06e-10!94;UBERON:0000489!2.98e-09!21;UBERON:0002113!2.24e-07!14;UBERON:0003918!2.24e-07!14;UBERON:0005095!2.24e-07!14;UBERON:0007687!2.24e-07!14;UBERON:0002021!2.27e-07!10;UBERON:0000411!2.27e-07!10;UBERON:0001950!2.27e-07!10;UBERON:0006554!6.25e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.89e-34,73;UBERON:0001016,2.33e-32,75;UBERON:0004121,9.68e-28,95;UBERON:0000924,9.68e-28,95;UBERON:0006601,9.68e-28,95;UBERON:0002346,4.63e-27,64;UBERON:0003075,4.63e-27,64;UBERON:0007284,4.63e-27,64;UBERON:0000073,2.69e-25,54;UBERON:0002020,1.33e-24,34;UBERON:0001049,7.55e-24,52;UBERON:0005068,7.55e-24,52;UBERON:0006241,7.55e-24,52;UBERON:0007135,7.55e-24,52;UBERON:0010371,2.14e-23,73;UBERON:0003528,3.74e-22,29;UBERON:0002791,3.74e-22,29;UBERON:0001893,3.74e-22,29;UBERON:0000955,4.00e-21,47;UBERON:0006238,4.00e-21,47;UBERON:0002616,1.04e-20,46;UBERON:0003056,2.88e-19,49;UBERON:0003080,2.94e-18,40;UBERON:0002780,8.43e-18,39;UBERON:0001890,8.43e-18,39;UBERON:0006240,8.43e-18,39;UBERON:0000956,4.13e-17,21;UBERON:0001869,4.13e-17,21;UBERON:0000203,4.13e-17,21;UBERON:0010314,2.97e-14,92;UBERON:0002619,9.60e-14,17;UBERON:0000489,2.83e-10,21;UBERON:0002113,1.82e-08,14;UBERON:0003918,1.82e-08,14;UBERON:0011143,1.82e-08,14;UBERON:0005095,1.82e-08,14;UBERON:0007687,1.82e-08,14;UBERON:0002021,1.84e-08,10;UBERON:0000411,1.84e-08,10;UBERON:0001950,1.84e-08,10;UBERON:0001954,9.98e-07,7;UBERON:0003022,9.98e-07,7;UBERON:0002421,9.98e-07,7;UBERON:0000349,9.98e-07,7;UBERON:0002600,9.98e-07,7
|phase1_expression=78.7932327755586,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7330086779479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,150.219332746128,54.482173318149,43.7467272917138,42.1359129092341,57.5010257459886,0,0,0,0,0,0.515672092277442,117.343547298567,108.443150750767,103.948350175013,3.38844532069132,1.77858959222228,0,0,0,42.8428158041319,78.3805342855971,301.218323756128,371.266330412149,312.122242645451,31.7072592688222,36.2224407160646,234.814862095067,330.475184070879,241.754540878436,39.6417171597799,39.5830748064082,43.3170423782607,59.216943190857,56.6308513898916,51.5704236851192,38.806436861192,22.5105044012672,35.4491934842199,28.8736013764194,29.1861945638161,30.7559085611746,0.757261933331841,0.755715601067855,0,0,0,0,0,0,5.19644354487482,0,0,0,35.3516983639468,0,0,0,0,0,0,13.7020655662872,0,0,0.693941307064543,0.608930956624282,1.38369298353635,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,3.23533699894818,0.441683036920787,0,1.86391761218122,16.1029438356351,12.1479089951804,0,0,0,0,25.9137806170343,37.972550033946,98.3873577043728,44.6728502894151,46.2844977767898,32.6227229958509,33.2594589288903,4.88828946481518,22.0200337979865,76.5749958054034,2.73574412652416,3.77349284591841,4.82794419310293,5.94205028357652,3.76762044589288,3.40182495756639,5.50888997224854,6.09061209638237,3.10444044886819,0,1.89106080167819,2.63926686245923,3.06874025398605,3.05851974148158,1.74126083261083,1.64625709126355,2.7864797354589,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,42.2682796613896,86.2340651738403,0,0,0.853153002140936,1.16118335930219,1.03093969057675,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,27.3121777372438,27.0768974885057,39.4477074855781,33.6024690944769,42.6695471768777,25.8801175395276,49.893627791039,65.5389057029434,59.3455191240397,44.0527875200828,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.585400943573396,0,0.221464689648775,0,0.491589944147214,0,0.433947175744535,0,0,0,0,27.775252067888,23.5595490050328,0,0,43.2246260600272,44.1195781055201,40.9304455692318,8.60287672629187,6.01556420022464,8.20921939287614,0.809621403349789,0.876767573733936,1.97643888973262,17.6726724031994,0,1.24645922567079,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,4.78627129996192,1.28602221018955,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,0.469343416127421,0.21183207086382,2.42581237860458,0,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0,23.9198639593557,0,0,0,0,0,0,0,0,0,0,0,0.813277868507395,0,0,0,0,0,0,0.388844919875379,0,0,0.299033092087958,0.165458490457098,0,0.645799117388655,0.168956125490778,0.117357238645754,2.604087696879,0.419437377702843,0.483168241652012,0.864090018773596,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0,0.596044064343795,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0.62799699626633,0,0.19318959403219,0,0,0,19.0597399533438,58.7341916321749,51.0961012522966,61.8727154514548,55.8522842616985,57.546931660734,56.6545423042275,56.7018900194717,55.3895079965791,47.1268105343573,48.1517089929193,41.8263010764232,27.9317411380722,23.2197703825622,12.8846560046196,19.0747977991464,16.1782287436012,12.2235700290888,12.9802086060503,12.194929964489,14.6564382823003,13.9413614939632,12.0720858487089,11.8924714486751,12.9330807857836,13.4398997356135,16.6702791949076,14.0220034393275,16.2043745189512,9.47797571847605,13.5423006523646,12.6861623382604,14.0205886865877,16.2136609164178,11.1916740806893,11.5754537910857,12.0152743206181,12.6220301282213,12.6273461490165,16.1606895476576,15.7119836064167,15.8970924286393,13.1996006383255,11.4584692087513,12.8597578184352,11.5743966588685,36.971965534816,8.18760629558929,12.247650080753,2.10417165275728,1.98532277207564,0.463735671240843
|phase1_expression=78.7932327755586,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7330086779479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,150.219332746128,54.482173318149,43.7467272917138,42.1359129092341,57.5010257459886,0,0,0,0,0,0.515672092277442,117.343547298567,108.443150750767,103.948350175013,3.38844532069132,1.77858959222228,0,0,0,42.8428158041319,78.3805342855971,301.218323756128,371.266330412149,312.122242645451,31.7072592688222,36.2224407160646,234.814862095067,330.475184070879,241.754540878436,39.6417171597799,39.5830748064082,43.3170423782607,59.216943190857,56.6308513898916,51.5704236851192,38.806436861192,22.5105044012672,35.4491934842199,28.8736013764194,29.1861945638161,30.7559085611746,0.757261933331841,0.755715601067855,0,0,0,0,0,0,5.19644354487482,0,0,0,35.3516983639468,0,0,0,0,0,0,13.7020655662872,0,0,0.693941307064543,0.608930956624282,1.38369298353635,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,3.23533699894818,0.441683036920787,0,1.86391761218122,16.1029438356351,12.1479089951804,0,0,0,0,25.9137806170343,37.972550033946,98.3873577043728,44.6728502894151,46.2844977767898,32.6227229958509,33.2594589288903,4.88828946481518,22.0200337979865,76.5749958054034,2.73574412652416,3.77349284591841,4.82794419310293,5.94205028357652,3.76762044589288,3.40182495756639,5.50888997224854,6.09061209638237,3.10444044886819,0,1.89106080167819,2.63926686245923,3.06874025398605,3.05851974148158,1.74126083261083,1.64625709126355,2.7864797354589,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,42.2682796613896,86.2340651738403,0,0,0.853153002140936,1.16118335930219,1.03093969057675,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,27.3121777372438,27.0768974885057,39.4477074855781,33.6024690944769,42.6695471768777,25.8801175395276,49.893627791039,65.5389057029434,59.3455191240397,44.0527875200828,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.585400943573396,0,0.221464689648775,0,0.491589944147214,0,0.433947175744535,0,0,0,0,27.775252067888,23.5595490050328,0,0,43.2246260600272,44.1195781055201,40.9304455692318,8.60287672629187,6.01556420022464,8.20921939287614,0.809621403349789,0.876767573733936,1.97643888973262,17.6726724031994,0,1.24645922567079,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62054984628179,4.78627129996192,1.28602221018955,0.354680467284547,0.356737635204141,0.658196082408484,0.304464949114599,0.469343416127421,0.21183207086382,2.42581237860458,0,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0,23.9198639593557,0,0,0,0,0,0,0,0,0,0,0,0.813277868507395,0,0,0,0,0,0,0.388844919875379,0,0,0.299033092087958,0.165458490457098,0,0.645799117388655,0.168956125490778,0.117357238645754,2.604087696879,0.419437377702843,0.483168241652012,0.864090018773596,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0,0.596044064343795,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0.62799699626633,0,0.19318959403219,0,0,0,19.0597399533438,58.7341916321749,51.0961012522966,61.8727154514548,55.8522842616985,57.546931660734,56.6545423042275,56.7018900194717,55.3895079965791,47.1268105343573,48.1517089929193,41.8263010764232,27.9317411380722,23.2197703825622,12.8846560046196,19.0747977991464,16.1782287436012,12.2235700290888,12.9802086060503,12.194929964489,14.6564382823003,13.9413614939632,12.0720858487089,11.8924714486751,12.9330807857836,13.4398997356135,16.6702791949076,14.0220034393275,16.2043745189512,9.47797571847605,13.5423006523646,12.6861623382604,14.0205886865877,16.2136609164178,11.1916740806893,11.5754537910857,12.0152743206181,12.6220301282213,12.6273461490165,16.1606895476576,15.7119836064167,15.8970924286393,13.1996006383255,11.4584692087513,12.8597578184352,11.5743966588685,36.971965534816,8.18760629558929,12.247650080753,2.10417165275728,1.98532277207564,0.463735671240843
|short_description=p@chr1:42752574..42752621,+
|short_description=p4@Pou3f3
}}
}}

Latest revision as of 03:49, 27 September 2015

Short description:p4@Pou3f3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pou3f3_5end
Coexpression cluster:MCL_coexpression_mm9:100
Association with transcript: NA
EntrezGene:Pou3f3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pou3f3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G778.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2150.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B854.48
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C343.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C442.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C457.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C3117.34
Mouse Granule cells, donor2.CNhs12357.11731-123E3108.44
Mouse Granule cells, donor3.CNhs12108.11636-122C7103.95
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C842.84
Mouse Microglia, donor2.CNhs12634.11736-123E878.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5301.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5371.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9312.12
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F131.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D536.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2234.81
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2330.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6241.75
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F339.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.32
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D459.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F456.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D851.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E438.81
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.87
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.76
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G635.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.70
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B216.10
cerebellum, neonate N30.CNhs11135.1395-42I212.15
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A425.91
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F198.39
cortex, adult.CNhs10473.12-14D544.67
cortex, neonate N30.CNhs11107.1392-42F246.28
diencephalon, adult.CNhs10482.20-12F232.62
diencephalon, neonate N30.CNhs11201.1388-42B233.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.02
epididymis, adult.CNhs10490.58-23B276.57
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E842.27
hippocampus, neonate N00.CNhs11228.627-43G186.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I927.31
kidney, embryo E15.CNhs10997.434-16F827.08
kidney, embryo E16.CNhs10584.464-22A539.45
kidney, embryo E17.CNhs11028.483-18I233.60
kidney, embryo E18.CNhs11001.1288-20C742.67
kidney, neonate N00.CNhs11214.646-21G725.88
kidney, neonate N10.CNhs11206.758-6D549.89
kidney, neonate N20.CNhs11113.832-19I165.54
kidney, neonate N25.CNhs11122.1353-25F359.35
kidney, neonate N30.CNhs11203.1385-42H144.05
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C227.78
medulla oblongata, neonate N30.CNhs11200.1396-42A323.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.22
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E244.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E340.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C923.92
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A251.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A361.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D755.85
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A457.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A556.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A755.39
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A847.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.15
whole body, embryo E11.CNhs11014.324-5I841.83
whole body, embryo E12.CNhs10587.857-27C927.93
whole body, embryo E13.CNhs10512.372-23H223.22
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B119.07
whole body, embryo E16.CNhs10514.453-14F216.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.20
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.86
whole body, embryo E17.5.CNhs10513.490-9F911.57
whole body, embryo E17.CNhs10517.475-3I536.97
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C212.25
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.89e-3473
nervous system2.33e-3275
ectoderm-derived structure9.68e-2895
ectoderm9.68e-2895
presumptive ectoderm9.68e-2895
neurectoderm4.63e-2764
neural plate4.63e-2764
presumptive neural plate4.63e-2764
regional part of nervous system2.69e-2554
gray matter1.33e-2434
neural tube7.55e-2452
neural rod7.55e-2452
future spinal cord7.55e-2452
neural keel7.55e-2452
ecto-epithelium2.14e-2373
brain grey matter3.74e-2229
regional part of telencephalon3.74e-2229
telencephalon3.74e-2229
brain4.00e-2147
future brain4.00e-2147
regional part of brain1.04e-2046
pre-chordal neural plate2.88e-1949
anterior neural tube2.94e-1840
regional part of forebrain8.43e-1839
forebrain8.43e-1839
future forebrain8.43e-1839
cerebral cortex4.13e-1721
cerebral hemisphere4.13e-1721
pallium4.13e-1721
structure with developmental contribution from neural crest2.97e-1492
regional part of cerebral cortex9.60e-1417
cavitated compound organ2.83e-1021
kidney1.82e-0814
kidney mesenchyme1.82e-0814
upper urinary tract1.82e-0814
kidney rudiment1.82e-0814
kidney field1.82e-0814
occipital lobe1.84e-0810
visual cortex1.84e-0810
neocortex1.84e-0810
Ammon's horn9.98e-077
lobe parts of cerebral cortex9.98e-077
hippocampal formation9.98e-077
limbic system9.98e-077
limbic lobe9.98e-077
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:42752574..42752621,%2B&oldid=4291160"