FFCP PHASE1:Mm9::chr2:96158171..96158214,+: Difference between revisions
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{{FFCP|EntrezGene=241568|HGNC=|MCL_coexpression_id=1|UniProt=Q8C031|association_with_transcript=-111bp_to_ENSMUST00000135431,uc008lhc.1,uc008lhd.1_5end|description=CAGE_peak_2_at_Lrrc4c_5end|id=chr2:96158171..96158214,+|ontology_enrichment_celltype=CL:0000117!1.97e-13!23;CL:0000337!1.97e-13!23;CL:0000540!7.34e-09!33;CL:0000047!7.34e-09!33;CL:0000031!7.34e-09!33;CL:0000404!7.34e-09!33;CL:0000221!5.69e-07!44;CL:0000133!5.69e-07!44;CL:0002319!9.34e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,9.04e-11,23;CL:0000337,9.04e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.84e-25!63;UBERON:0002346!5.21e-22!71;UBERON:0003075!5.21e-22!71;UBERON:0007284!5.21e-22!71;UBERON:0001049!5.99e-22!52;UBERON:0005068!5.99e-22!52;UBERON:0006241!5.99e-22!52;UBERON:0007135!5.99e-22!52;UBERON:0000073!1.10e-21!75;UBERON:0001016!1.10e-21!75;UBERON:0001017!3.37e-21!73;UBERON:0005743!3.37e-21!73;UBERON:0002020!6.54e-21!34;UBERON:0000955!9.65e-21!50;UBERON:0006238!9.65e-21!50;UBERON:0002616!5.51e-20!49;UBERON:0003056!6.43e-20!49;UBERON:0004121!2.44e-19!102;UBERON:0000924!2.44e-19!102;UBERON:0006601!2.44e-19!102;UBERON:0002791!2.57e-17!29;UBERON:0003528!2.57e-17!29;UBERON:0001893!2.57e-17!29;UBERON:0003080!1.40e-15!40;UBERON:0002780!1.13e-14!39;UBERON:0001890!1.13e-14!39;UBERON:0006240!1.13e-14!39;UBERON:0007811!2.04e-13!86;UBERON:0000153!1.72e-11!94;UBERON:0002021!3.09e-11!10;UBERON:0000411!3.09e-11!10;UBERON:0001950!3.09e-11!10;UBERON:0000956!4.40e-11!21;UBERON:0001869!4.40e-11!21;UBERON:0000203!4.40e-11!21;UBERON:0002619!1.22e-10!17;UBERON:0002420!1.08e-07!8;UBERON:0007245!1.08e-07!8;UBERON:0010009!1.08e-07!8;UBERON:0010011!1.08e-07!8;UBERON:0000454!1.08e-07!8;UBERON:0000025!3.46e-07!114;UBERON:0003076!4.03e-07!12;UBERON:0003057!4.03e-07!12;UBERON:0002298!9.64e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-36,54;UBERON:0001049,3.31e-33,52;UBERON:0005068,3.31e-33,52;UBERON:0006241,3.31e-33,52;UBERON:0007135,3.31e-33,52;UBERON:0002020,8.64e-29,34;UBERON:0001017,3.04e-28,73;UBERON:0000955,4.96e-28,47;UBERON:0006238,4.96e-28,47;UBERON:0002346,2.83e-27,64;UBERON:0003075,2.83e-27,64;UBERON:0007284,2.83e-27,64;UBERON:0001016,2.99e-27,75;UBERON:0002616,1.18e-26,46;UBERON:0003528,6.21e-24,29;UBERON:0002791,6.21e-24,29;UBERON:0001893,6.21e-24,29;UBERON:0010371,7.18e-23,73;UBERON:0003080,5.50e-22,40;UBERON:0002021,4.87e-21,10;UBERON:0000411,4.87e-21,10;UBERON:0001950,4.87e-21,10;UBERON:0004121,5.10e-21,95;UBERON:0000924,5.10e-21,95;UBERON:0006601,5.10e-21,95;UBERON:0002780,2.35e-20,39;UBERON:0001890,2.35e-20,39;UBERON:0006240,2.35e-20,39;UBERON:0003056,1.80e-18,49;UBERON:0010314,1.30e-17,92;UBERON:0002420,6.55e-14,8;UBERON:0007245,6.55e-14,8;UBERON:0010009,6.55e-14,8;UBERON:0010011,6.55e-14,8;UBERON:0000454,6.55e-14,8;UBERON:0002619,1.41e-13,17;UBERON:0000956,1.33e-12,21;UBERON:0001869,1.33e-12,21;UBERON:0000203,1.33e-12,21;UBERON:0003076,9.85e-12,12;UBERON:0003057,9.85e-12,12;UBERON:0000025,1.37e-11,114;UBERON:0004111,2.70e-10,122;UBERON:0000369,4.12e-09,5;UBERON:0002435,4.12e-09,5;UBERON:0000204,4.12e-09,5;UBERON:0010082,4.12e-09,5;UBERON:0002950,2.12e-08,4;UBERON:0001891,2.12e-08,4;UBERON:0009616,2.12e-08,4;UBERON:0010286,2.12e-08,4;UBERON:0002240,1.24e-07,6;UBERON:0005174,1.24e-07,6;UBERON:0001137,1.24e-07,6|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0.210324961351382,0.571301968807607,1.76694832761291,0.367472397644862,0.0958454710182364,0.919218786610021,4.40463523997555,5.36286819957788,4.45458946443106,1.18697658957174,2.10421580285542,1.56274011167028,2.51264699101243,4.50210088025344,4.43114918552749,2.65165726926301,3.84403538157578,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,5.44561437714983,0,0,0,0,15.1288545798871,10.0650132620098,3.01570445070875,9.03886464999838,10.4843337505436,4.36354893575076,7.46309810111685,0,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0.816437989815934,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,1.23413690309903,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0,0.268412837520744,2.3131894342054,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,9.49414661396846,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,9.66682996665071,15.4681788628637,10.998603669996,8.90607275701835,15.8632718451837,8.10027000278167,10.8077088773813,13.1411298605419,13.9795284172991,0.103787347584177,0.798049746802062,1.36586884603307,0,0,0.367687016900028,0.888986911206461,1.23621034343337,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,1.591905626988,0.576226371643824,0.574354689556133,0.476293691283074,1.0429589335037,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,1.43061713968393,1.16277133305863,0.941093804153306,0.761531471025089,1.09756783723664,0.263069711437843,0.814824683075171,0,0.711810108745045,0.788035859004508,1.22769312950907,0.77468420592983,0.385813221962283,0.749431733813838,0.701794825336225,0.214871054048298,0.191288332068843,0,0|short_description=p2@Lrrc4c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241568 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C031 | |||
|association_with_transcript=-111bp_to_ENSMUST00000135431,uc008lhc.1,uc008lhd.1_5end | |||
|cluster_id=chr2:96158171..96158214,+ | |||
|description=CAGE_peak_2_at_Lrrc4c_5end | |||
|id=chr2:96158171..96158214,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.97e-13!23;CL:0000337!1.97e-13!23;CL:0000540!7.34e-09!33;CL:0000047!7.34e-09!33;CL:0000031!7.34e-09!33;CL:0000404!7.34e-09!33;CL:0000221!5.69e-07!44;CL:0000133!5.69e-07!44;CL:0002319!9.34e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.04e-11,23;CL:0000337,9.04e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.84e-25!63;UBERON:0002346!5.21e-22!71;UBERON:0003075!5.21e-22!71;UBERON:0007284!5.21e-22!71;UBERON:0001049!5.99e-22!52;UBERON:0005068!5.99e-22!52;UBERON:0006241!5.99e-22!52;UBERON:0007135!5.99e-22!52;UBERON:0000073!1.10e-21!75;UBERON:0001016!1.10e-21!75;UBERON:0001017!3.37e-21!73;UBERON:0005743!3.37e-21!73;UBERON:0002020!6.54e-21!34;UBERON:0000955!9.65e-21!50;UBERON:0006238!9.65e-21!50;UBERON:0002616!5.51e-20!49;UBERON:0003056!6.43e-20!49;UBERON:0004121!2.44e-19!102;UBERON:0000924!2.44e-19!102;UBERON:0006601!2.44e-19!102;UBERON:0002791!2.57e-17!29;UBERON:0003528!2.57e-17!29;UBERON:0001893!2.57e-17!29;UBERON:0003080!1.40e-15!40;UBERON:0002780!1.13e-14!39;UBERON:0001890!1.13e-14!39;UBERON:0006240!1.13e-14!39;UBERON:0007811!2.04e-13!86;UBERON:0000153!1.72e-11!94;UBERON:0002021!3.09e-11!10;UBERON:0000411!3.09e-11!10;UBERON:0001950!3.09e-11!10;UBERON:0000956!4.40e-11!21;UBERON:0001869!4.40e-11!21;UBERON:0000203!4.40e-11!21;UBERON:0002619!1.22e-10!17;UBERON:0002420!1.08e-07!8;UBERON:0007245!1.08e-07!8;UBERON:0010009!1.08e-07!8;UBERON:0010011!1.08e-07!8;UBERON:0000454!1.08e-07!8;UBERON:0000025!3.46e-07!114;UBERON:0003076!4.03e-07!12;UBERON:0003057!4.03e-07!12;UBERON:0002298!9.64e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-36,54;UBERON:0001049,3.31e-33,52;UBERON:0005068,3.31e-33,52;UBERON:0006241,3.31e-33,52;UBERON:0007135,3.31e-33,52;UBERON:0002020,8.64e-29,34;UBERON:0001017,3.04e-28,73;UBERON:0000955,4.96e-28,47;UBERON:0006238,4.96e-28,47;UBERON:0002346,2.83e-27,64;UBERON:0003075,2.83e-27,64;UBERON:0007284,2.83e-27,64;UBERON:0001016,2.99e-27,75;UBERON:0002616,1.18e-26,46;UBERON:0003528,6.21e-24,29;UBERON:0002791,6.21e-24,29;UBERON:0001893,6.21e-24,29;UBERON:0010371,7.18e-23,73;UBERON:0003080,5.50e-22,40;UBERON:0002021,4.87e-21,10;UBERON:0000411,4.87e-21,10;UBERON:0001950,4.87e-21,10;UBERON:0004121,5.10e-21,95;UBERON:0000924,5.10e-21,95;UBERON:0006601,5.10e-21,95;UBERON:0002780,2.35e-20,39;UBERON:0001890,2.35e-20,39;UBERON:0006240,2.35e-20,39;UBERON:0003056,1.80e-18,49;UBERON:0010314,1.30e-17,92;UBERON:0002420,6.55e-14,8;UBERON:0007245,6.55e-14,8;UBERON:0010009,6.55e-14,8;UBERON:0010011,6.55e-14,8;UBERON:0000454,6.55e-14,8;UBERON:0002619,1.41e-13,17;UBERON:0000956,1.33e-12,21;UBERON:0001869,1.33e-12,21;UBERON:0000203,1.33e-12,21;UBERON:0003076,9.85e-12,12;UBERON:0003057,9.85e-12,12;UBERON:0000025,1.37e-11,114;UBERON:0004111,2.70e-10,122;UBERON:0000369,4.12e-09,5;UBERON:0002435,4.12e-09,5;UBERON:0000204,4.12e-09,5;UBERON:0010082,4.12e-09,5;UBERON:0002950,2.12e-08,4;UBERON:0001891,2.12e-08,4;UBERON:0009616,2.12e-08,4;UBERON:0010286,2.12e-08,4;UBERON:0002240,1.24e-07,6;UBERON:0005174,1.24e-07,6;UBERON:0001137,1.24e-07,6 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0.210324961351382,0.571301968807607,1.76694832761291,0.367472397644862,0.0958454710182364,0.919218786610021,4.40463523997555,5.36286819957788,4.45458946443106,1.18697658957174,2.10421580285542,1.56274011167028,2.51264699101243,4.50210088025344,4.43114918552749,2.65165726926301,3.84403538157578,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,5.44561437714983,0,0,0,0,15.1288545798871,10.0650132620098,3.01570445070875,9.03886464999838,10.4843337505436,4.36354893575076,7.46309810111685,0,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0.816437989815934,0.896796041993948,0.843315521037559,2.32833033665114,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,1.23413690309903,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0,0.268412837520744,2.3131894342054,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,9.49414661396846,0,0,0,0,0.215423397732799,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,7.97328798645192,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,9.66682996665071,15.4681788628637,10.998603669996,8.90607275701835,15.8632718451837,8.10027000278167,10.8077088773813,13.1411298605419,13.9795284172991,0.103787347584177,0.798049746802062,1.36586884603307,0,0,0.367687016900028,0.888986911206461,1.23621034343337,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,1.591905626988,0.576226371643824,0.574354689556133,0.476293691283074,1.0429589335037,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.354951612318675,1.43061713968393,1.16277133305863,0.941093804153306,0.761531471025089,1.09756783723664,0.263069711437843,0.814824683075171,0,0.711810108745045,0.788035859004508,1.22769312950907,0.77468420592983,0.385813221962283,0.749431733813838,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p2@Lrrc4c | |||
}} |
Latest revision as of 03:55, 27 September 2015
Short description: | p2@Lrrc4c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrrc4c_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -111bp_to_ENSMUST00000135431, uc008lhc.1, uc008lhd.1_5end |
EntrezGene: | Lrrc4c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.04e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.04e-11 | 23 |