Personal tools

FFCP PHASE1:Mm9::chr2:97307843..97307856,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=241568
|EntrezGene=241568
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8C031
|UniProt=Q8C031
|association_with_transcript=12bp_to_NM_178725,uc008lhf.2_5end
|association_with_transcript=12bp_to_NM_178725,uc008lhf.2_5end
|cluster_id=chr2:97307843..97307856,+
|description=CAGE_peak_4_at_Lrrc4c_5end
|description=CAGE_peak_4_at_Lrrc4c_5end
|id=chr2:97307843..97307856,+
|id=chr2:97307843..97307856,+
|ontology_enrichment_celltype=CL:0000540!2.67e-14!33;CL:0000047!2.67e-14!33;CL:0000031!2.67e-14!33;CL:0000404!2.67e-14!33;CL:0000221!4.90e-12!44;CL:0000133!4.90e-12!44;CL:0002319!1.38e-11!43;CL:0000117!1.13e-10!23;CL:0000337!1.13e-10!23;CL:0000393!5.26e-10!39;CL:0000211!5.26e-10!39;CL:0000055!5.22e-08!50
|ontology_enrichment_celltype=CL:0000540!2.67e-14!33;CL:0000047!2.67e-14!33;CL:0000031!2.67e-14!33;CL:0000404!2.67e-14!33;CL:0000221!4.90e-12!44;CL:0000133!4.90e-12!44;CL:0002319!1.38e-11!43;CL:0000117!1.13e-10!23;CL:0000337!1.13e-10!23;CL:0000393!5.26e-10!39;CL:0000211!5.26e-10!39;CL:0000055!5.22e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.36e-18,33;CL:0000047,2.36e-18,33;CL:0000031,2.36e-18,33;CL:0000404,2.36e-18,33;CL:0000117,4.89e-18,23;CL:0000337,4.89e-18,23;CL:0000393,1.18e-14,39;CL:0000211,1.18e-14,39;CL:0002319,8.99e-13,43;CL:0000221,2.34e-12,44;CL:0000133,2.34e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.03e-28!102;UBERON:0000924!3.03e-28!102;UBERON:0006601!3.03e-28!102;UBERON:0001017!1.77e-27!73;UBERON:0005743!1.77e-27!73;UBERON:0000073!3.27e-27!75;UBERON:0001016!3.27e-27!75;UBERON:0002346!1.34e-26!71;UBERON:0003075!1.34e-26!71;UBERON:0007284!1.34e-26!71;UBERON:0000033!9.69e-25!63;UBERON:0001049!2.88e-22!52;UBERON:0005068!2.88e-22!52;UBERON:0006241!2.88e-22!52;UBERON:0007135!2.88e-22!52;UBERON:0000955!2.75e-21!50;UBERON:0006238!2.75e-21!50;UBERON:0002616!1.59e-20!49;UBERON:0003056!2.32e-20!49;UBERON:0002020!2.49e-20!34;UBERON:0002791!2.02e-17!29;UBERON:0003528!2.02e-17!29;UBERON:0001893!2.02e-17!29;UBERON:0003080!5.54e-17!40;UBERON:0002780!2.71e-16!39;UBERON:0001890!2.71e-16!39;UBERON:0006240!2.71e-16!39;UBERON:0000956!5.77e-14!21;UBERON:0001869!5.77e-14!21;UBERON:0000203!5.77e-14!21;UBERON:0007811!8.23e-14!86;UBERON:0000153!2.20e-12!94;UBERON:0002619!6.76e-12!17;UBERON:0002021!3.64e-09!10;UBERON:0000411!3.64e-09!10;UBERON:0001950!3.64e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.80e-42,73;UBERON:0001016,7.44e-41,75;UBERON:0000073,2.41e-39,54;UBERON:0001049,1.45e-36,52;UBERON:0005068,1.45e-36,52;UBERON:0006241,1.45e-36,52;UBERON:0007135,1.45e-36,52;UBERON:0002020,5.37e-35,34;UBERON:0004121,6.51e-33,95;UBERON:0000924,6.51e-33,95;UBERON:0006601,6.51e-33,95;UBERON:0000955,3.11e-32,47;UBERON:0006238,3.11e-32,47;UBERON:0002346,2.83e-31,64;UBERON:0003075,2.83e-31,64;UBERON:0007284,2.83e-31,64;UBERON:0003528,8.33e-31,29;UBERON:0002791,8.33e-31,29;UBERON:0001893,8.33e-31,29;UBERON:0002616,1.18e-30,46;UBERON:0003080,4.31e-27,40;UBERON:0010371,3.41e-26,73;UBERON:0002780,1.22e-25,39;UBERON:0001890,1.22e-25,39;UBERON:0006240,1.22e-25,39;UBERON:0003056,5.87e-24,49;UBERON:0000956,7.23e-22,21;UBERON:0001869,7.23e-22,21;UBERON:0000203,7.23e-22,21;UBERON:0002619,3.50e-19,17;UBERON:0002021,5.08e-19,10;UBERON:0000411,5.08e-19,10;UBERON:0001950,5.08e-19,10;UBERON:0010314,9.55e-19,92;UBERON:0000025,1.54e-11,114;UBERON:0004111,3.47e-10,122;UBERON:0002420,7.03e-10,8;UBERON:0007245,7.03e-10,8;UBERON:0010009,7.03e-10,8;UBERON:0010011,7.03e-10,8;UBERON:0000454,7.03e-10,8;UBERON:0011216,1.04e-09,194;UBERON:0003076,1.57e-09,12;UBERON:0003057,1.57e-09,12;UBERON:0002950,2.85e-07,4;UBERON:0001891,2.85e-07,4;UBERON:0009616,2.85e-07,4;UBERON:0010286,2.85e-07,4
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,1.21505344498522,1.05162480675691,2.57085885963423,1.10434270475807,1.5923803897944,1.43768206527355,0.919218786610021,2.20231761998777,2.68143409978894,1.53606533256243,1.05509030184155,1.82975287204819,0,2.51264699101243,1.68828783009504,2.75036845998258,1.47314292736834,2.27794689278565,0.931997229126503,0.075726193333184,0.151143120213571,0,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0.35333957451034,0.985903938436763,0,2.54805239706646,0,0,0,0,0.5709193985953,0,0.890652834388949,0.173485326766136,0.608930956624282,0,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,1.17112318804619,1.67557365450764,0.255457055208591,0,0,0,2.99581278809645,5.94750783664214,4.27224797183739,7.12679712788333,8.18289463457058,3.74018480207208,4.05603157669394,0,0.124406970610093,0,0.210441855886474,0.780722657776222,0.459804208866946,1.0803727788321,0.90422890701429,0.680364991513279,0.896796041993948,0.562210347358373,1.03481348295606,0,0.189106080167819,0,0,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,2.94405927989778,1.44066457330998,0,0.264450566663544,0.426576501070468,0.696710015581316,0.128867461322093,0.403367049246685,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0,0,0,0.199141273254367,0,0,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,2.0871576698413,3.04750385139728,0,0,0.94652465824877,0.780877488593277,0.646270193198397,0.238968797952552,2.45078541490634,0.283076530788832,3.64329631507405,2.04579100537918,3.55759000151871,3.85585579706168,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.36012218806262,0,0.428674070063185,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,2.59595422814714,0,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0.627264888043406,0.436725127492355,0.539457385539283,0.495920734352016,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0,0,0.675824501963113,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0.386379188064381,0,0.183151624267265,0,0,7.34177395402186,4.60325236507177,6.30185064783336,6.8741272937475,6.16574267793578,3.7769694869485,5.40018000185445,5.40385443869065,8.15656336171568,3.62432218226274,0,0.399024873401031,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.824140228955577,0.64183841918363,0.505394423527595,0,1.13175804831646,0.561849044819294,0.512201219238954,0.287177344778066,0,0.811190281613988,1.54327376370964,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0,0,0.282328141245992,0.423073039458382,0.182927972872773,0,0.407412341537585,0.561142271657738,0,0.197008964751127,0,0.464810523557898,0.578719832943424,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.388859798148567,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,1.21505344498522,1.05162480675691,2.57085885963423,1.10434270475807,1.5923803897944,1.43768206527355,0.919218786610021,2.20231761998777,2.68143409978894,1.53606533256243,1.05509030184155,1.82975287204819,0,2.51264699101243,1.68828783009504,2.75036845998258,1.47314292736834,2.27794689278565,0.931997229126503,0.075726193333184,0.151143120213571,0,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0.35333957451034,0.985903938436763,0,2.54805239706646,0,0,0,0,0.5709193985953,0,0.890652834388949,0.173485326766136,0.608930956624282,0,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,1.17112318804619,1.67557365450764,0.255457055208591,0,0,0,2.99581278809645,5.94750783664214,4.27224797183739,7.12679712788333,8.18289463457058,3.74018480207208,4.05603157669394,0,0.124406970610093,0,0.210441855886474,0.780722657776222,0.459804208866946,1.0803727788321,0.90422890701429,0.680364991513279,0.896796041993948,0.562210347358373,1.03481348295606,0,0.189106080167819,0,0,0.834141747676794,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,2.94405927989778,1.44066457330998,0,0.264450566663544,0.426576501070468,0.696710015581316,0.128867461322093,0.403367049246685,0.22237804384487,0,0.474529061544512,0.329397909448022,0,0.397912944082302,0,0,0,0.199141273254367,0,0,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,2.0871576698413,3.04750385139728,0,0,0.94652465824877,0.780877488593277,0.646270193198397,0.238968797952552,2.45078541490634,0.283076530788832,3.64329631507405,2.04579100537918,3.55759000151871,3.85585579706168,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.36012218806262,0,0.428674070063185,0.354680467284547,0.356737635204141,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0,2.59595422814714,0,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0.627264888043406,0.436725127492355,0.539457385539283,0.495920734352016,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0,0,0.675824501963113,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0.386379188064381,0,0.183151624267265,0,0,7.34177395402186,4.60325236507177,6.30185064783336,6.8741272937475,6.16574267793578,3.7769694869485,5.40018000185445,5.40385443869065,8.15656336171568,3.62432218226274,0,0.399024873401031,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.824140228955577,0.64183841918363,0.505394423527595,0,1.13175804831646,0.561849044819294,0.512201219238954,0.287177344778066,0,0.811190281613988,1.54327376370964,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0,0,0.282328141245992,0.423073039458382,0.182927972872773,0,0.407412341537585,0.561142271657738,0,0.197008964751127,0,0.464810523557898,0.578719832943424,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0.463735671240843
|short_description=p4@Lrrc4c
|short_description=p4@Lrrc4c
}}
}}

Latest revision as of 03:57, 27 September 2015

Short description:p4@Lrrc4c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lrrc4c_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 12bp_to_NM_178725, uc008lhf.2_5end
EntrezGene:Lrrc4c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Lrrc4c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.36e-1833
neuronal stem cell2.36e-1833
neuroblast2.36e-1833
electrically signaling cell2.36e-1833
CNS neuron (sensu Vertebrata)4.89e-1823
neuroblast (sensu Vertebrata)4.89e-1823
electrically responsive cell1.18e-1439
electrically active cell1.18e-1439
neural cell8.99e-1343
ectodermal cell2.34e-1244
neurectodermal cell2.34e-1244

Uber anatomy
Ontology termp-valuen
central nervous system2.80e-4273
nervous system7.44e-4175
regional part of nervous system2.41e-3954
neural tube1.45e-3652
neural rod1.45e-3652
future spinal cord1.45e-3652
neural keel1.45e-3652
gray matter5.37e-3534
ectoderm-derived structure6.51e-3395
ectoderm6.51e-3395
presumptive ectoderm6.51e-3395
brain3.11e-3247
future brain3.11e-3247
neurectoderm2.83e-3164
neural plate2.83e-3164
presumptive neural plate2.83e-3164
brain grey matter8.33e-3129
regional part of telencephalon8.33e-3129
telencephalon8.33e-3129
regional part of brain1.18e-3046
anterior neural tube4.31e-2740
ecto-epithelium3.41e-2673
regional part of forebrain1.22e-2539
forebrain1.22e-2539
future forebrain1.22e-2539
pre-chordal neural plate5.87e-2449
cerebral cortex7.23e-2221
cerebral hemisphere7.23e-2221
pallium7.23e-2221
regional part of cerebral cortex3.50e-1917
occipital lobe5.08e-1910
visual cortex5.08e-1910
neocortex5.08e-1910
structure with developmental contribution from neural crest9.55e-1992
tube1.54e-11114
anatomical conduit3.47e-10122
basal ganglion7.03e-108
nuclear complex of neuraxis7.03e-108
aggregate regional part of brain7.03e-108
collection of basal ganglia7.03e-108
cerebral subcortex7.03e-108
organ system subdivision1.04e-09194
posterior neural tube1.57e-0912
chordal neural plate1.57e-0912
regional part of midbrain2.85e-074
midbrain2.85e-074
presumptive midbrain2.85e-074
midbrain neural tube2.85e-074
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:97307843..97307856,%2B&oldid=4291476"