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FFCP PHASE1:Mm9::chr18:36838881..36838904,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225372
|EntrezGene=225372
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8R1C9,Q3UR23
|UniProt=Q8R1C9,Q3UR23
|association_with_transcript=115bp_to_ENSMUST00000001415,NM_146085,uc008enz.1_5end
|association_with_transcript=115bp_to_ENSMUST00000001415,NM_146085,uc008enz.1_5end
|cluster_id=chr18:36838881..36838904,-
|description=CAGE_peak_7_at_Apbb3_5end
|description=CAGE_peak_7_at_Apbb3_5end
|id=chr18:36838881..36838904,-
|id=chr18:36838881..36838904,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002614,1.69e-08,3;CL:0002610,3.86e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!2.19e-12!50;UBERON:0006238!2.19e-12!50;UBERON:0001049!5.41e-12!52;UBERON:0005068!5.41e-12!52;UBERON:0006241!5.41e-12!52;UBERON:0007135!5.41e-12!52;UBERON:0000033!5.80e-12!63;UBERON:0002346!5.96e-12!71;UBERON:0003075!5.96e-12!71;UBERON:0007284!5.96e-12!71;UBERON:0002616!7.12e-12!49;UBERON:0001017!8.78e-11!73;UBERON:0005743!8.78e-11!73;UBERON:0000073!1.10e-10!75;UBERON:0001016!1.10e-10!75;UBERON:0004121!6.01e-10!102;UBERON:0000924!6.01e-10!102;UBERON:0006601!6.01e-10!102;UBERON:0007811!9.12e-10!86;UBERON:0003056!7.76e-09!49;UBERON:0002020!1.34e-08!34;UBERON:0000153!2.31e-08!94;UBERON:0003080!5.33e-08!40;UBERON:0002021!6.86e-08!10;UBERON:0000411!6.86e-08!10;UBERON:0001950!6.86e-08!10;UBERON:0002780!2.00e-07!39;UBERON:0001890!2.00e-07!39;UBERON:0006240!2.00e-07!39;UBERON:0002791!2.56e-07!29;UBERON:0003528!2.56e-07!29;UBERON:0001893!2.56e-07!29
|ontology_enrichment_uberon=UBERON:0000955!2.19e-12!50;UBERON:0006238!2.19e-12!50;UBERON:0001049!5.41e-12!52;UBERON:0005068!5.41e-12!52;UBERON:0006241!5.41e-12!52;UBERON:0007135!5.41e-12!52;UBERON:0000033!5.80e-12!63;UBERON:0002346!5.96e-12!71;UBERON:0003075!5.96e-12!71;UBERON:0007284!5.96e-12!71;UBERON:0002616!7.12e-12!49;UBERON:0001017!8.78e-11!73;UBERON:0005743!8.78e-11!73;UBERON:0000073!1.10e-10!75;UBERON:0001016!1.10e-10!75;UBERON:0004121!6.01e-10!102;UBERON:0000924!6.01e-10!102;UBERON:0006601!6.01e-10!102;UBERON:0007811!9.12e-10!86;UBERON:0003056!7.76e-09!49;UBERON:0002020!1.34e-08!34;UBERON:0000153!2.31e-08!94;UBERON:0003080!5.33e-08!40;UBERON:0002021!6.86e-08!10;UBERON:0000411!6.86e-08!10;UBERON:0001950!6.86e-08!10;UBERON:0002780!2.00e-07!39;UBERON:0001890!2.00e-07!39;UBERON:0006240!2.00e-07!39;UBERON:0002791!2.56e-07!29;UBERON:0003528!2.56e-07!29;UBERON:0001893!2.56e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.94e-29,54;UBERON:0001049,3.51e-25,52;UBERON:0005068,3.51e-25,52;UBERON:0006241,3.51e-25,52;UBERON:0007135,3.51e-25,52;UBERON:0000955,7.69e-24,47;UBERON:0006238,7.69e-24,47;UBERON:0001017,6.59e-23,73;UBERON:0002616,1.95e-22,46;UBERON:0001016,4.13e-22,75;UBERON:0002346,6.73e-21,64;UBERON:0003075,6.73e-21,64;UBERON:0007284,6.73e-21,64;UBERON:0002020,2.33e-18,34;UBERON:0002021,1.09e-17,10;UBERON:0000411,1.09e-17,10;UBERON:0001950,1.09e-17,10;UBERON:0010371,1.57e-17,73;UBERON:0003528,1.77e-17,29;UBERON:0002791,1.77e-17,29;UBERON:0001893,1.77e-17,29;UBERON:0003080,1.93e-17,40;UBERON:0004121,3.03e-17,95;UBERON:0000924,3.03e-17,95;UBERON:0006601,3.03e-17,95;UBERON:0002780,8.06e-16,39;UBERON:0001890,8.06e-16,39;UBERON:0006240,8.06e-16,39;UBERON:0003056,7.24e-15,49;UBERON:0010314,1.37e-12,92;UBERON:0002619,6.32e-12,17;UBERON:0000956,1.86e-11,21;UBERON:0001869,1.86e-11,21;UBERON:0000203,1.86e-11,21;UBERON:0002950,7.44e-11,4;UBERON:0001891,7.44e-11,4;UBERON:0009616,7.44e-11,4;UBERON:0010286,7.44e-11,4;UBERON:0000025,5.75e-09,114;UBERON:0004111,8.45e-09,122;UBERON:0002038,1.69e-08,3;UBERON:0009663,1.69e-08,3;UBERON:0009661,1.69e-08,3;UBERON:0000125,1.69e-08,3;UBERON:0002308,1.69e-08,3;UBERON:0003076,2.07e-08,12;UBERON:0003057,2.07e-08,12;UBERON:0004684,3.86e-08,3;UBERON:0002275,3.86e-08,3;UBERON:0007023,5.52e-08,51;UBERON:0002420,2.09e-07,8;UBERON:0007245,2.09e-07,8;UBERON:0010009,2.09e-07,8;UBERON:0010011,2.09e-07,8;UBERON:0000454,2.09e-07,8
|phase1_expression=0.480446541314382,0,0,1.20985684522732,1.50268718983904,0.839396359559449,0,0,0.422366166455,0.70219357896598,0.171217968225505,0.478632953972018,0.513602189793617,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.765389611359628,0.297872853602656,0,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0,0.135005938331691,0,2.85650984403804,1.32521124570968,0.122490799214954,0,0,2.20231761998777,5.2351808614927,5.83704826373725,0.131886287730194,0.457438218012048,0,4.4669279840221,5.6276261003168,4.73674568108111,0,0.996601765593721,0.559198337475902,0.151452386666368,0.0755715601067855,0,0,0,0,1.29955283489534,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0,0,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,0,2.34224637609238,3.97948742945565,0,0.11981512450592,0,0.127070227073065,5.54225365797844,3.66000482254901,1.13088916901578,5.04090528557602,4.09144731728529,4.36354893575076,4.54275536589721,0.407357455401265,0,0.758168275301024,1.05220927943237,0,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.700592054203017,0.822799249567402,0.32833492815819,0.486412857275134,0.584799949701329,0,0.671032093801859,2.3131894342054,0.411618449517138,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,4.0137647496948,2.46144541843627,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0.395287777946524,1.28528526568723,0.567760340833074,0,0.325773918707152,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0.441056796109924,0.49465875882444,0,0.0603129249281559,0.358117032009409,0,0.874442509889552,3.15223013417866,0.170870880797853,0,0,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0,0.247960367176008,0,0.259229946583586,0,1.69107881605257,0.149516546043979,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.524296722128554,3.14059357073808,3.45636007509439,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.240390899039938,0.443068581523732,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0.335769232728157,0.386379188064381,0.187682475451182,0,0,1.50471631210609,1.6942555278512,2.30162618253588,4.01026859407578,3.60891682921744,3.42541259885321,0.755393897389701,2.02506750069542,6.30449684513909,3.17199686288943,4.65984280576638,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0
|phase1_expression=0.480446541314382,0,0,1.20985684522732,1.50268718983904,0.839396359559449,0,0,0.422366166455,0.70219357896598,0.171217968225505,0.478632953972018,0.513602189793617,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.765389611359628,0.297872853602656,0,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0,0.135005938331691,0,2.85650984403804,1.32521124570968,0.122490799214954,0,0,2.20231761998777,5.2351808614927,5.83704826373725,0.131886287730194,0.457438218012048,0,4.4669279840221,5.6276261003168,4.73674568108111,0,0.996601765593721,0.559198337475902,0.151452386666368,0.0755715601067855,0,0,0,0,1.29955283489534,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0,0,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,0,2.34224637609238,3.97948742945565,0,0.11981512450592,0,0.127070227073065,5.54225365797844,3.66000482254901,1.13088916901578,5.04090528557602,4.09144731728529,4.36354893575076,4.54275536589721,0.407357455401265,0,0.758168275301024,1.05220927943237,0,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.700592054203017,0.822799249567402,0.32833492815819,0.486412857275134,0.584799949701329,0,0.671032093801859,2.3131894342054,0.411618449517138,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,4.0137647496948,2.46144541843627,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0.395287777946524,1.28528526568723,0.567760340833074,0,0.325773918707152,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0.441056796109924,0.49465875882444,0,0.0603129249281559,0.358117032009409,0,0.874442509889552,3.15223013417866,0.170870880797853,0,0,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0,0.247960367176008,0,0.259229946583586,0,1.69107881605257,0.149516546043979,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.524296722128554,3.14059357073808,3.45636007509439,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.240390899039938,0.443068581523732,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0.335769232728157,0.386379188064381,0.187682475451182,0,0,1.50471631210609,1.6942555278512,2.30162618253588,4.01026859407578,3.60891682921744,3.42541259885321,0.755393897389701,2.02506750069542,6.30449684513909,3.17199686288943,4.65984280576638,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0
|short_description=p7@Apbb3
|short_description=p7@Apbb3
}}
}}

Latest revision as of 05:25, 27 September 2015

Short description:p7@Apbb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Apbb3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 115bp_to_ENSMUST00000001415, NM_146085, uc008enz.1_5end
EntrezGene:Apbb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Apbb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra1.69e-083
raphe nuclei neuron3.86e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.94e-2954
neural tube3.51e-2552
neural rod3.51e-2552
future spinal cord3.51e-2552
neural keel3.51e-2552
brain7.69e-2447
future brain7.69e-2447
central nervous system6.59e-2373
regional part of brain1.95e-2246
nervous system4.13e-2275
neurectoderm6.73e-2164
neural plate6.73e-2164
presumptive neural plate6.73e-2164
gray matter2.33e-1834
occipital lobe1.09e-1710
visual cortex1.09e-1710
neocortex1.09e-1710
ecto-epithelium1.57e-1773
brain grey matter1.77e-1729
regional part of telencephalon1.77e-1729
telencephalon1.77e-1729
anterior neural tube1.93e-1740
ectoderm-derived structure3.03e-1795
ectoderm3.03e-1795
presumptive ectoderm3.03e-1795
regional part of forebrain8.06e-1639
forebrain8.06e-1639
future forebrain8.06e-1639
pre-chordal neural plate7.24e-1549
structure with developmental contribution from neural crest1.37e-1292
regional part of cerebral cortex6.32e-1217
cerebral cortex1.86e-1121
cerebral hemisphere1.86e-1121
pallium1.86e-1121
regional part of midbrain7.44e-114
midbrain7.44e-114
presumptive midbrain7.44e-114
midbrain neural tube7.44e-114
tube5.75e-09114
anatomical conduit8.45e-09122
substantia nigra1.69e-083
telencephalic nucleus1.69e-083
midbrain nucleus1.69e-083
neural nucleus1.69e-083
nucleus of brain1.69e-083
posterior neural tube2.07e-0812
chordal neural plate2.07e-0812
raphe nuclei3.86e-083
reticular formation3.86e-083
adult organism5.52e-0851
basal ganglion2.09e-078
nuclear complex of neuraxis2.09e-078
aggregate regional part of brain2.09e-078
collection of basal ganglia2.09e-078
cerebral subcortex2.09e-078
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