Personal tools

FFCP PHASE1:Mm9::chr3:107320687..107320710,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=229706
|EntrezGene=229706
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-20bp_to_ENSMUST00000170429_5end
|association_with_transcript=-20bp_to_ENSMUST00000170429_5end
|cluster_id=chr3:107320687..107320710,-
|description=CAGE_peak_4_at_Slc6a17_5end
|description=CAGE_peak_4_at_Slc6a17_5end
|id=chr3:107320687..107320710,-
|id=chr3:107320687..107320710,-
|ontology_enrichment_celltype=CL:0000117!8.49e-11!23;CL:0000337!8.49e-11!23;CL:0000540!1.50e-07!33;CL:0000047!1.50e-07!33;CL:0000031!1.50e-07!33;CL:0000404!1.50e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-12,23;CL:0000337,2.78e-12,23;CL:0000540,9.87e-08,33;CL:0000047,9.87e-08,33;CL:0000031,9.87e-08,33;CL:0000404,9.87e-08,33;CL:0002610,2.35e-07,3;CL:0002614,3.50e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!9.11e-31!63;UBERON:0001049!2.22e-28!52;UBERON:0005068!2.22e-28!52;UBERON:0006241!2.22e-28!52;UBERON:0007135!2.22e-28!52;UBERON:0000955!2.64e-27!50;UBERON:0006238!2.64e-27!50;UBERON:0003056!1.51e-26!49;UBERON:0002616!1.79e-26!49;UBERON:0002346!6.68e-26!71;UBERON:0003075!6.68e-26!71;UBERON:0007284!6.68e-26!71;UBERON:0001017!9.93e-26!73;UBERON:0005743!9.93e-26!73;UBERON:0000073!3.57e-25!75;UBERON:0001016!3.57e-25!75;UBERON:0003080!1.48e-22!40;UBERON:0004121!3.32e-22!102;UBERON:0000924!3.32e-22!102;UBERON:0006601!3.32e-22!102;UBERON:0002020!3.57e-22!34;UBERON:0002780!1.12e-21!39;UBERON:0001890!1.12e-21!39;UBERON:0006240!1.12e-21!39;UBERON:0002791!1.18e-18!29;UBERON:0003528!1.18e-18!29;UBERON:0001893!1.18e-18!29;UBERON:0007811!6.65e-18!86;UBERON:0000153!2.82e-15!94;UBERON:0000956!1.69e-14!21;UBERON:0001869!1.69e-14!21;UBERON:0000203!1.69e-14!21;UBERON:0002619!3.29e-12!17;UBERON:0000025!1.94e-11!114;UBERON:0004111!5.42e-11!122;UBERON:0002021!2.56e-10!10;UBERON:0000411!2.56e-10!10;UBERON:0001950!2.56e-10!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.91e-47,54;UBERON:0001049,1.19e-42,52;UBERON:0005068,1.19e-42,52;UBERON:0006241,1.19e-42,52;UBERON:0007135,1.19e-42,52;UBERON:0001017,6.32e-39,73;UBERON:0001016,1.14e-37,75;UBERON:0002020,1.42e-35,34;UBERON:0000955,1.27e-34,47;UBERON:0006238,1.27e-34,47;UBERON:0002346,3.27e-33,64;UBERON:0003075,3.27e-33,64;UBERON:0007284,3.27e-33,64;UBERON:0002616,6.91e-33,46;UBERON:0010371,3.65e-28,73;UBERON:0004121,5.05e-28,95;UBERON:0000924,5.05e-28,95;UBERON:0006601,5.05e-28,95;UBERON:0003080,8.43e-28,40;UBERON:0003528,2.01e-27,29;UBERON:0002791,2.01e-27,29;UBERON:0001893,2.01e-27,29;UBERON:0002780,5.29e-26,39;UBERON:0001890,5.29e-26,39;UBERON:0006240,5.29e-26,39;UBERON:0002021,2.34e-23,10;UBERON:0000411,2.34e-23,10;UBERON:0001950,2.34e-23,10;UBERON:0003056,1.41e-21,49;UBERON:0002619,4.92e-21,17;UBERON:0010314,9.54e-21,92;UBERON:0000956,2.82e-19,21;UBERON:0001869,2.82e-19,21;UBERON:0000203,2.82e-19,21;UBERON:0000025,3.04e-15,114;UBERON:0003076,4.48e-15,12;UBERON:0003057,4.48e-15,12;UBERON:0004111,9.83e-14,122;UBERON:0002240,3.74e-11,6;UBERON:0005174,3.74e-11,6;UBERON:0001137,3.74e-11,6;UBERON:0001948,1.62e-09,5;UBERON:0002315,1.62e-09,5;UBERON:0011216,1.87e-09,194;UBERON:0002950,3.08e-09,4;UBERON:0001891,3.08e-09,4;UBERON:0009616,3.08e-09,4;UBERON:0010286,3.08e-09,4;UBERON:0002420,3.54e-09,8;UBERON:0007245,3.54e-09,8;UBERON:0010009,3.54e-09,8;UBERON:0010011,3.54e-09,8;UBERON:0000454,3.54e-09,8;UBERON:0004684,2.35e-07,3;UBERON:0002275,2.35e-07,3;UBERON:0000483,2.57e-07,174;UBERON:0002038,3.50e-07,3;UBERON:0009663,3.50e-07,3;UBERON:0009661,3.50e-07,3;UBERON:0000125,3.50e-07,3;UBERON:0002308,3.50e-07,3;UBERON:0000119,3.80e-07,176
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.777719596297134,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.21389876515759,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.414758449233911,0.540023753326763,0.420649922702764,2.28520787523043,1.32521124570968,0.244981598429908,0.383381884072945,0,3.30347642998166,5.87361755191863,5.06901559745603,1.05509030184155,0.914876436024097,0,4.18774498502071,2.8138130501584,5.19514042441154,1.17851434189467,1.28134512719193,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.323533699894818,0,0,0,2.92780797011547,4.60782754989601,0.255457055208591,0,0,0,5.99162557619291,7.32000964509802,2.1361239859187,6.77914848749878,7.92717917724025,6.2336413367868,4.70499662896497,0,0,0.252722758433675,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0.465067889500816,0.268273401399619,0.233530684734339,0.493679549740441,0.32833492815819,0,0.146199987425332,0,0,5.67782861123144,1.44066457330998,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.280543279561274,0.316182685621286,0.885660887877613,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.509235257325564,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,3.53211297973142,3.98519734413491,0,0,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,3.53453448063988,0.141940085208269,0.534196811001766,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,1.70219802876894,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,10.1655331671072,10.5874804396651,8.59343270159095,6.53042092906013,7.53590771747707,6.7985450765073,11.4753825039407,8.55610286126019,4.53142408984205,5.1776031175182,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.463537303779422,0.38581844092741,0,0,0,0.354951612318675,0.715308569841963,0.290692833264657,0,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,1.49886346762768,0.233931608445408,1.28922632428979,0,0.220591419119515,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.777719596297134,0.139986421625363,0,0,0,0,0,0.286533439938757,0,1.21389876515759,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.414758449233911,0.540023753326763,0.420649922702764,2.28520787523043,1.32521124570968,0.244981598429908,0.383381884072945,0,3.30347642998166,5.87361755191863,5.06901559745603,1.05509030184155,0.914876436024097,0,4.18774498502071,2.8138130501584,5.19514042441154,1.17851434189467,1.28134512719193,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.323533699894818,0,0,0,2.92780797011547,4.60782754989601,0.255457055208591,0,0,0,5.99162557619291,7.32000964509802,2.1361239859187,6.77914848749878,7.92717917724025,6.2336413367868,4.70499662896497,0,0,0.252722758433675,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.512454881139399,0.374806898238915,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0.465067889500816,0.268273401399619,0.233530684734339,0.493679549740441,0.32833492815819,0,0.146199987425332,0,0,5.67782861123144,1.44066457330998,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.280543279561274,0.316182685621286,0.885660887877613,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.509235257325564,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,3.53211297973142,3.98519734413491,0,0,0,0,0,0,0.222798674082394,0,0,0.292255857911312,0,3.53453448063988,0.141940085208269,0.534196811001766,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,1.70219802876894,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,10.1655331671072,10.5874804396651,8.59343270159095,6.53042092906013,7.53590771747707,6.7985450765073,11.4753825039407,8.55610286126019,4.53142408984205,5.1776031175182,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.463537303779422,0.38581844092741,0,0,0,0.354951612318675,0.715308569841963,0.290692833264657,0,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,1.49886346762768,0.233931608445408,1.28922632428979,0,0.220591419119515,0.231867835620421
|short_description=p4@Slc6a17
|short_description=p4@Slc6a17
}}
}}

Latest revision as of 07:05, 27 September 2015

Short description:p4@Slc6a17
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Slc6a17_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -20bp_to_ENSMUST00000170429_5end
EntrezGene:Slc6a17
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Slc6a17

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.78e-1223
neuroblast (sensu Vertebrata)2.78e-1223
neuron9.87e-0833
neuronal stem cell9.87e-0833
neuroblast9.87e-0833
electrically signaling cell9.87e-0833
raphe nuclei neuron2.35e-073
neuron of the substantia nigra3.50e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.91e-4754
neural tube1.19e-4252
neural rod1.19e-4252
future spinal cord1.19e-4252
neural keel1.19e-4252
central nervous system6.32e-3973
nervous system1.14e-3775
gray matter1.42e-3534
brain1.27e-3447
future brain1.27e-3447
neurectoderm3.27e-3364
neural plate3.27e-3364
presumptive neural plate3.27e-3364
regional part of brain6.91e-3346
ecto-epithelium3.65e-2873
ectoderm-derived structure5.05e-2895
ectoderm5.05e-2895
presumptive ectoderm5.05e-2895
anterior neural tube8.43e-2840
brain grey matter2.01e-2729
regional part of telencephalon2.01e-2729
telencephalon2.01e-2729
regional part of forebrain5.29e-2639
forebrain5.29e-2639
future forebrain5.29e-2639
occipital lobe2.34e-2310
visual cortex2.34e-2310
neocortex2.34e-2310
pre-chordal neural plate1.41e-2149
regional part of cerebral cortex4.92e-2117
structure with developmental contribution from neural crest9.54e-2192
cerebral cortex2.82e-1921
cerebral hemisphere2.82e-1921
pallium2.82e-1921
tube3.04e-15114
posterior neural tube4.48e-1512
chordal neural plate4.48e-1512
anatomical conduit9.83e-14122
spinal cord3.74e-116
dorsal region element3.74e-116
dorsum3.74e-116
regional part of spinal cord1.62e-095
gray matter of spinal cord1.62e-095
organ system subdivision1.87e-09194
regional part of midbrain3.08e-094
midbrain3.08e-094
presumptive midbrain3.08e-094
midbrain neural tube3.08e-094
basal ganglion3.54e-098
nuclear complex of neuraxis3.54e-098
aggregate regional part of brain3.54e-098
collection of basal ganglia3.54e-098
cerebral subcortex3.54e-098
raphe nuclei2.35e-073
reticular formation2.35e-073
epithelium2.57e-07174
substantia nigra3.50e-073
telencephalic nucleus3.50e-073
midbrain nucleus3.50e-073
neural nucleus3.50e-073
nucleus of brain3.50e-073
cell layer3.80e-07176
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:107320687..107320710,-&oldid=4298343"