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FFCP PHASE1:Mm9::chrX:133403076..133403145,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:133403076..133403145,-
|DHSsupport=NA
|short_description=p1@Rab9b
|DPIdataset=NA
|description=CAGE_peak_1_at_Rab9b_5end
|association_with_transcript=0bp_to_NM_176971,uc009uje.1_5end
|EntrezGene=319642
|EntrezGene=319642
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3KNA5,Q8BHH2
|UniProt=Q3KNA5,Q8BHH2
|association_with_transcript=0bp_to_NM_176971,uc009uje.1_5end
|cluster_id=chrX:133403076..133403145,-
|description=CAGE_peak_1_at_Rab9b_5end
|id=chrX:133403076..133403145,-
|ontology_enrichment_celltype=CL:0000540!8.22e-16!33;CL:0000047!8.22e-16!33;CL:0000031!8.22e-16!33;CL:0000404!8.22e-16!33;CL:0000117!8.93e-14!23;CL:0000337!8.93e-14!23;CL:0000393!3.85e-11!39;CL:0000211!3.85e-11!39;CL:0000221!7.48e-11!44;CL:0000133!7.48e-11!44;CL:0002319!8.25e-11!43;CL:0000055!2.31e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,9.43e-19,33;CL:0000047,9.43e-19,33;CL:0000031,9.43e-19,33;CL:0000404,9.43e-19,33;CL:0000117,4.76e-18,23;CL:0000337,4.76e-18,23;CL:0000393,4.13e-14,39;CL:0000211,4.13e-14,39;CL:0002319,1.57e-12,43;CL:0000221,5.34e-12,44;CL:0000133,5.34e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.46e-28!102;UBERON:0000924!2.46e-28!102;UBERON:0006601!2.46e-28!102;UBERON:0000073!4.15e-28!75;UBERON:0001016!4.15e-28!75;UBERON:0002346!5.87e-28!71;UBERON:0003075!5.87e-28!71;UBERON:0007284!5.87e-28!71;UBERON:0001017!8.95e-28!73;UBERON:0005743!8.95e-28!73;UBERON:0000033!6.73e-24!63;UBERON:0001049!5.04e-23!52;UBERON:0005068!5.04e-23!52;UBERON:0006241!5.04e-23!52;UBERON:0007135!5.04e-23!52;UBERON:0000955!1.07e-21!50;UBERON:0006238!1.07e-21!50;UBERON:0003056!2.88e-21!49;UBERON:0002616!4.04e-21!49;UBERON:0003080!3.28e-18!40;UBERON:0002020!4.56e-18!34;UBERON:0002780!1.97e-17!39;UBERON:0001890!1.97e-17!39;UBERON:0006240!1.97e-17!39;UBERON:0002791!7.72e-15!29;UBERON:0003528!7.72e-15!29;UBERON:0001893!7.72e-15!29;UBERON:0007811!1.02e-11!86;UBERON:0000153!8.86e-10!94;UBERON:0000956!9.14e-10!21;UBERON:0001869!9.14e-10!21;UBERON:0000203!9.14e-10!21;UBERON:0002619!2.26e-08!17;UBERON:0002021!2.23e-07!10;UBERON:0000411!2.23e-07!10;UBERON:0001950!2.23e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.71e-33,73;UBERON:0002346,2.80e-33,64;UBERON:0003075,2.80e-33,64;UBERON:0007284,2.80e-33,64;UBERON:0001016,8.70e-33,75;UBERON:0000073,2.20e-30,54;UBERON:0004121,1.22e-29,95;UBERON:0000924,1.22e-29,95;UBERON:0006601,1.22e-29,95;UBERON:0001049,2.21e-28,52;UBERON:0005068,2.21e-28,52;UBERON:0006241,2.21e-28,52;UBERON:0007135,2.21e-28,52;UBERON:0010371,1.62e-26,73;UBERON:0003056,1.95e-24,49;UBERON:0002020,1.10e-23,34;UBERON:0000955,1.15e-23,47;UBERON:0006238,1.15e-23,47;UBERON:0002616,6.45e-23,46;UBERON:0003080,3.48e-21,40;UBERON:0002780,3.58e-20,39;UBERON:0001890,3.58e-20,39;UBERON:0006240,3.58e-20,39;UBERON:0003528,2.51e-19,29;UBERON:0002791,2.51e-19,29;UBERON:0001893,2.51e-19,29;UBERON:0010314,6.77e-19,92;UBERON:0000956,1.73e-12,21;UBERON:0001869,1.73e-12,21;UBERON:0000203,1.73e-12,21;UBERON:0002619,1.31e-10,17;UBERON:0002021,2.03e-09,10;UBERON:0000411,2.03e-09,10;UBERON:0001950,2.03e-09,10;UBERON:0002420,3.11e-08,8;UBERON:0007245,3.11e-08,8;UBERON:0010009,3.11e-08,8;UBERON:0010011,3.11e-08,8;UBERON:0000454,3.11e-08,8;UBERON:0003076,1.27e-07,12;UBERON:0003057,1.27e-07,12
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,8.29497489524351,10.5798195854407,5.70448263155561,0,0,0,0,0,0,0.384218305321555,3.21437798156281,1.35005938331691,3.99617426567626,11.9973413449598,9.718215801871,4.5321595709533,3.1629005436018,7.35375029288017,28.6301290598411,24.6436562504412,35.7903222487047,9.10015385338338,11.3444678066988,12.5019208933622,27.080750903134,39.9561453122493,34.2268075020055,24.1595440088408,29.043822883017,19.3855423658313,0.984440513331393,1.20914496170857,0,0,0,0,0,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,0.867426633830679,0.304465478312141,0.691846491768175,1.50722640552623,1.64624189989987,0.753999547978053,0,0.578397427679647,0,0.323533699894818,0,0,0,11.1256702864388,7.12118803165747,0.510914110417183,0,0,0,49.5807016429963,22.8750301409313,21.8638572676384,19.1206752211504,18.9229438424445,27.4280218818619,28.0677385107221,0.203678727700633,0,0,1.68353484709179,0.650602214813519,2.06911893990126,2.16074555766419,3.31550599238573,4.89862793889561,6.02134485338794,4.68508622798644,4.65666067330228,0.431135985865684,0.378212160335639,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0.243206428637567,0.292399974850665,0,0.536825675041487,24.1833440848746,26.4464853814761,0,0,0.426576501070468,0.232236671860439,0.644337306610467,1.4117846723634,0.22237804384487,0.380451252225118,0,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2569038378514,36.6872579033596,0.163934945376675,0,2.2085575359138,3.12350995437311,2.80050417052639,0.955875191810208,2.00518806674155,2.54768877709949,2.02405350837447,4.9683495844923,2.76701444562566,8.9969968598106,0,0.178065603667255,0,0.164970122972535,2.65490276679926,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,1.09060118843252,0.712994756769443,1.26414703174326,1.05418608574999,2.06271086496374,5.7874732978144,1.08036656418786,0.776152102696527,0.643011105094777,0.532020700926821,1.42695054081656,4.27827453565514,1.522324745573,0,0,0.882113592219848,0.65954501176592,0.322928853391811,0.120625849856312,0,0.164140899745061,0.291480836629851,38.3830375161755,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.813277868507395,0.324016022465404,1.04544148007234,0,0.539457385539283,0.743881101528023,0.26175594198403,0.129614973291793,0,2.25477175473676,0.149516546043979,0,0,0,0,0.234714477291508,0.39061315453185,0.419437377702843,0.241584120826006,0.576060012515731,0,0.202725215290164,0.308132871494482,0,0,0.39736270956253,0,0,0,0.15241361331,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0,0,0,13.5540442228096,23.0162618253588,15.4681788628637,17.0134650520251,15.7568979547248,21.9064230243013,14.8504950050997,14.8605997063993,17.2194115413998,17.0860902878101,0.830298780673413,1.99512436700516,1.36586884603307,1.70174701947806,2.72497111416377,3.8607136774503,4.00044110042907,4.32673620201678,3.85103051510178,2.77966932940177,3.8021894983536,4.14977951049368,3.93294331373506,4.1616349063165,3.67587001315925,2.85776214769844,3.1288768005111,2.31491064556446,4.53294490883637,5.00476328456951,1.71434626192708,3.37204031702741,3.57654284920981,2.0348498328526,3.95259397744389,3.13074049199203,3.10977553883713,2.36762740294059,3.80251518768413,2.24456908663095,1.77952527186261,3.15214343601803,3.6830793885272,3.25367366490529,2.12197272079256,2.99772693525535,4.21076895201735,2.57845264857958,3.44318997723918,0.441182838239031,1.39120701372253
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,8.29497489524351,10.5798195854407,5.70448263155561,0,0,0,0,0,0,0.384218305321555,3.21437798156281,1.35005938331691,3.99617426567626,11.9973413449598,9.718215801871,4.5321595709533,3.1629005436018,7.35375029288017,28.6301290598411,24.6436562504412,35.7903222487047,9.10015385338338,11.3444678066988,12.5019208933622,27.080750903134,39.9561453122493,34.2268075020055,24.1595440088408,29.043822883017,19.3855423658313,0.984440513331393,1.20914496170857,0,0,0,0,0,0,0.983110940922263,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,0.867426633830679,0.304465478312141,0.691846491768175,1.50722640552623,1.64624189989987,0.753999547978053,0,0.578397427679647,0,0.323533699894818,0,0,0,11.1256702864388,7.12118803165747,0.510914110417183,0,0,0,49.5807016429963,22.8750301409313,21.8638572676384,19.1206752211504,18.9229438424445,27.4280218818619,28.0677385107221,0.203678727700633,0,0,1.68353484709179,0.650602214813519,2.06911893990126,2.16074555766419,3.31550599238573,4.89862793889561,6.02134485338794,4.68508622798644,4.65666067330228,0.431135985865684,0.378212160335639,0,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0.243206428637567,0.292399974850665,0,0.536825675041487,24.1833440848746,26.4464853814761,0,0,0.426576501070468,0.232236671860439,0.644337306610467,1.4117846723634,0.22237804384487,0.380451252225118,0,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2569038378514,36.6872579033596,0.163934945376675,0,2.2085575359138,3.12350995437311,2.80050417052639,0.955875191810208,2.00518806674155,2.54768877709949,2.02405350837447,4.9683495844923,2.76701444562566,8.9969968598106,0,0.178065603667255,0,0.164970122972535,2.65490276679926,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,1.09060118843252,0.712994756769443,1.26414703174326,1.05418608574999,2.06271086496374,5.7874732978144,1.08036656418786,0.776152102696527,0.643011105094777,0.532020700926821,1.42695054081656,4.27827453565514,1.522324745573,0,0,0.882113592219848,0.65954501176592,0.322928853391811,0.120625849856312,0,0.164140899745061,0.291480836629851,38.3830375161755,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.813277868507395,0.324016022465404,1.04544148007234,0,0.539457385539283,0.743881101528023,0.26175594198403,0.129614973291793,0,2.25477175473676,0.149516546043979,0,0,0,0,0.234714477291508,0.39061315453185,0.419437377702843,0.241584120826006,0.576060012515731,0,0.202725215290164,0.308132871494482,0,0,0.39736270956253,0,0,0,0.15241361331,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0,0,0,13.5540442228096,23.0162618253588,15.4681788628637,17.0134650520251,15.7568979547248,21.9064230243013,14.8504950050997,14.8605997063993,17.2194115413998,17.0860902878101,0.830298780673413,1.99512436700516,1.36586884603307,1.70174701947806,2.72497111416377,3.8607136774503,4.00044110042907,4.32673620201678,3.85103051510178,2.77966932940177,3.8021894983536,4.14977951049368,3.93294331373506,4.1616349063165,3.67587001315925,2.85776214769844,3.1288768005111,2.31491064556446,4.53294490883637,5.00476328456951,1.71434626192708,3.37204031702741,3.57654284920981,2.0348498328526,3.95259397744389,3.13074049199203,3.10977553883713,2.36762740294059,3.80251518768413,2.24456908663095,1.77952527186261,3.15214343601803,3.6830793885272,3.25367366490529,2.12197272079256,2.99772693525535,4.21076895201735,2.57845264857958,3.44318997723918,0.441182838239031,1.39120701372253
|short_description=p1@Rab9b
}}
}}

Latest revision as of 15:01, 1 October 2015

Short description:p1@Rab9b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab9b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_176971, uc009uje.1_5end
EntrezGene:Rab9b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab9b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.04
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A449.58
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F121.86
cortex, adult.CNhs10473.12-14D519.12
cortex, neonate N30.CNhs11107.1392-42F218.92
diencephalon, adult.CNhs10482.20-12F227.43
diencephalon, neonate N30.CNhs11201.1388-42B228.07
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E824.18
hippocampus, neonate N00.CNhs11228.627-43G126.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C228.26
medulla oblongata, neonate N30.CNhs11200.1396-42A336.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C938.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.43e-1933
neuronal stem cell9.43e-1933
neuroblast9.43e-1933
electrically signaling cell9.43e-1933
CNS neuron (sensu Vertebrata)4.76e-1823
neuroblast (sensu Vertebrata)4.76e-1823
electrically responsive cell4.13e-1439
electrically active cell4.13e-1439
neural cell1.57e-1243
ectodermal cell5.34e-1244
neurectodermal cell5.34e-1244

Uber anatomy
Ontology termp-valuen
central nervous system2.71e-3373
neurectoderm2.80e-3364
neural plate2.80e-3364
presumptive neural plate2.80e-3364
nervous system8.70e-3375
regional part of nervous system2.20e-3054
ectoderm-derived structure1.22e-2995
ectoderm1.22e-2995
presumptive ectoderm1.22e-2995
neural tube2.21e-2852
neural rod2.21e-2852
future spinal cord2.21e-2852
neural keel2.21e-2852
ecto-epithelium1.62e-2673
pre-chordal neural plate1.95e-2449
gray matter1.10e-2334
brain1.15e-2347
future brain1.15e-2347
regional part of brain6.45e-2346
anterior neural tube3.48e-2140
regional part of forebrain3.58e-2039
forebrain3.58e-2039
future forebrain3.58e-2039
brain grey matter2.51e-1929
regional part of telencephalon2.51e-1929
telencephalon2.51e-1929
structure with developmental contribution from neural crest6.77e-1992
cerebral cortex1.73e-1221
cerebral hemisphere1.73e-1221
pallium1.73e-1221
regional part of cerebral cortex1.31e-1017
occipital lobe2.03e-0910
visual cortex2.03e-0910
neocortex2.03e-0910
basal ganglion3.11e-088
nuclear complex of neuraxis3.11e-088
aggregate regional part of brain3.11e-088
collection of basal ganglia3.11e-088
cerebral subcortex3.11e-088
posterior neural tube1.27e-0712
chordal neural plate1.27e-0712
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