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FFCP PHASE1:Mm9::chr18:72510791..72510810,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13176
|EntrezGene=13176
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=G3X9X6,Q3TZP5,P70211
|UniProt=G3X9X6,Q3TZP5,P70211
|association_with_transcript=-68bp_to_ENSMUST00000114943,NM_007831,uc008fop.1,uc008foq.1,uc008for.1,uc008fos.1_5end
|association_with_transcript=-68bp_to_ENSMUST00000114943,NM_007831,uc008fop.1,uc008foq.1,uc008for.1,uc008fos.1_5end
|cluster_id=chr18:72510791..72510810,-
|description=CAGE_peak_4_at_Dcc_5end
|description=CAGE_peak_4_at_Dcc_5end
|id=chr18:72510791..72510810,-
|id=chr18:72510791..72510810,-
|ontology_enrichment_celltype=CL:0000117!3.24e-17!23;CL:0000337!3.24e-17!23;CL:0000540!6.85e-15!33;CL:0000047!6.85e-15!33;CL:0000031!6.85e-15!33;CL:0000404!6.85e-15!33;CL:0000393!1.25e-10!39;CL:0000211!1.25e-10!39;CL:0000221!2.75e-09!44;CL:0000133!2.75e-09!44;CL:0002319!3.54e-09!43
|ontology_enrichment_celltype=CL:0000117!3.24e-17!23;CL:0000337!3.24e-17!23;CL:0000540!6.85e-15!33;CL:0000047!6.85e-15!33;CL:0000031!6.85e-15!33;CL:0000404!6.85e-15!33;CL:0000393!1.25e-10!39;CL:0000211!1.25e-10!39;CL:0000221!2.75e-09!44;CL:0000133!2.75e-09!44;CL:0002319!3.54e-09!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-29,23;CL:0000337,1.38e-29,23;CL:0000540,2.14e-18,33;CL:0000047,2.14e-18,33;CL:0000031,2.14e-18,33;CL:0000404,2.14e-18,33;CL:0000393,1.76e-14,39;CL:0000211,1.76e-14,39;CL:0002319,1.70e-12,43;CL:0000221,4.66e-12,44;CL:0000133,4.66e-12,44;CL:0002609,2.01e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.13e-28!63;UBERON:0002346!3.78e-28!71;UBERON:0003075!3.78e-28!71;UBERON:0007284!3.78e-28!71;UBERON:0001017!1.22e-27!73;UBERON:0005743!1.22e-27!73;UBERON:0003056!2.57e-27!49;UBERON:0000073!3.74e-26!75;UBERON:0001016!3.74e-26!75;UBERON:0001049!9.10e-26!52;UBERON:0005068!9.10e-26!52;UBERON:0006241!9.10e-26!52;UBERON:0007135!9.10e-26!52;UBERON:0004121!3.01e-25!102;UBERON:0000924!3.01e-25!102;UBERON:0006601!3.01e-25!102;UBERON:0000955!4.16e-24!50;UBERON:0006238!4.16e-24!50;UBERON:0002616!2.92e-23!49;UBERON:0003080!1.55e-21!40;UBERON:0002780!8.52e-21!39;UBERON:0001890!8.52e-21!39;UBERON:0006240!8.52e-21!39;UBERON:0002020!5.72e-20!34;UBERON:0002791!1.85e-16!29;UBERON:0003528!1.85e-16!29;UBERON:0001893!1.85e-16!29;UBERON:0007811!1.03e-15!86;UBERON:0000153!1.31e-14!94;UBERON:0000956!6.67e-11!21;UBERON:0001869!6.67e-11!21;UBERON:0000203!6.67e-11!21;UBERON:0002619!5.15e-08!17;UBERON:0002420!6.16e-07!8;UBERON:0007245!6.16e-07!8;UBERON:0010009!6.16e-07!8;UBERON:0010011!6.16e-07!8;UBERON:0000454!6.16e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.56e-45,64;UBERON:0003075,1.56e-45,64;UBERON:0007284,1.56e-45,64;UBERON:0000073,8.62e-42,54;UBERON:0003056,8.73e-41,49;UBERON:0001049,1.14e-39,52;UBERON:0005068,1.14e-39,52;UBERON:0006241,1.14e-39,52;UBERON:0007135,1.14e-39,52;UBERON:0010371,3.61e-38,73;UBERON:0004121,2.18e-37,95;UBERON:0000924,2.18e-37,95;UBERON:0006601,2.18e-37,95;UBERON:0001017,6.44e-37,73;UBERON:0001016,1.47e-35,75;UBERON:0000955,8.88e-34,47;UBERON:0006238,8.88e-34,47;UBERON:0003080,1.91e-32,40;UBERON:0002616,2.42e-32,46;UBERON:0002780,3.71e-31,39;UBERON:0001890,3.71e-31,39;UBERON:0006240,3.71e-31,39;UBERON:0002020,1.50e-30,34;UBERON:0010314,2.27e-27,92;UBERON:0003528,2.13e-24,29;UBERON:0002791,2.13e-24,29;UBERON:0001893,2.13e-24,29;UBERON:0000956,8.47e-15,21;UBERON:0001869,8.47e-15,21;UBERON:0000203,8.47e-15,21;UBERON:0000025,1.65e-11,114;UBERON:0002420,3.50e-11,8;UBERON:0007245,3.50e-11,8;UBERON:0010009,3.50e-11,8;UBERON:0010011,3.50e-11,8;UBERON:0000454,3.50e-11,8;UBERON:0004111,5.18e-10,122;UBERON:0002619,5.68e-10,17;UBERON:0000970,1.39e-08,9;UBERON:0000019,1.39e-08,9;UBERON:0000047,1.39e-08,9;UBERON:0010312,1.39e-08,9;UBERON:0004088,1.39e-08,9;UBERON:0002104,1.39e-08,9;UBERON:0001456,1.39e-08,9;UBERON:0003072,1.39e-08,9;UBERON:0004128,1.39e-08,9;UBERON:0003071,1.39e-08,9;UBERON:0000369,3.76e-08,5;UBERON:0002435,3.76e-08,5;UBERON:0000204,3.76e-08,5;UBERON:0010082,3.76e-08,5;UBERON:0002240,3.78e-08,6;UBERON:0005174,3.78e-08,6;UBERON:0001137,3.78e-08,6;UBERON:0000483,4.28e-08,174;UBERON:0000119,7.38e-08,176;UBERON:0001894,1.60e-07,10;UBERON:0006222,1.60e-07,10;UBERON:0003076,1.67e-07,12;UBERON:0003057,1.67e-07,12;UBERON:0001948,2.31e-07,5;UBERON:0002315,2.31e-07,5;UBERON:0001444,9.89e-07,11
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,2.64495489636016,6.33831403506179,0,0,0,0,0,0,0.384218305321555,4.14758449233911,3.91517221161903,3.99617426567626,2.28520787523043,1.98781686856452,3.42974237801871,2.97120960156533,1.83843757322004,1.10115880999389,2.29837208553338,1.38245879930619,3.29715719325485,4.11694396210843,3.12548022334056,1.95428099300967,2.25105044012672,2.13917546887534,4.12480019663135,2.84743361598206,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,2.84602214869163,3.20250421973039,3.01570445070875,2.08589184230732,1.53429274398198,2.0778804455956,3.40706652442291,0.203678727700633,0,0,1.26265113531884,0.910843100738926,1.37941262660084,1.80062129805349,2.26057226753573,2.31324097114515,3.33095672740609,3.93547243150861,2.06962696591213,0,1.13463648100692,0.527853372491847,0,0.834141747676794,0,0,0.995171334092466,0,0,0,0.414251545071004,0,0.720248245844059,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0,0,0,0,0,2.52347938276953,4.32199371992995,0,0,0.426576501070468,0,0,0.201683524623343,0,0,0,0,0,0,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,2.34423373184406,0,0,0,0.780877488593277,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0.790575555893047,3.85585579706168,0,0.534196811001766,1.62886959353576,0.329940245945071,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,0,0,1.36175842301515,1.8006109403131,0,2.57204442037911,3.72414490648775,1.60531935841864,1.81003922662333,0.608929898229199,0,0,0,0.16488625294148,0,0,0.477489376012546,0,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.432021363287205,0.627264888043406,0.436725127492355,0.269728692769641,0,0,0,0,0,0,0,0,0.258319646955462,0.506868376472335,0.469428954583016,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,3.68260189205742,1.71868654031819,2.92150409984269,0.685082519770642,0.755393897389701,2.70009000092722,3.60256962579376,1.81256963593682,1.55328093525546,0.62272408550506,1.19707462020309,2.21953687480374,1.21553358534147,0.838452650511929,0.735374033800057,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.37456602987953,0.448176066834085,0.976402972245426,0.476293691283074,0.579421629724277,0.964546102318525,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.953744759789284,1.16277133305863,1.31753132581463,0.930760686808441,0.73171189149109,1.05227884575137,0.814824683075171,1.68342681497322,0.593175090620871,0.591026894253381,0,0.929621047115796,1.92906610981141,0.249810577937946,0.701794825336225,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85559506063035,2.64495489636016,6.33831403506179,0,0,0,0,0,0,0.384218305321555,4.14758449233911,3.91517221161903,3.99617426567626,2.28520787523043,1.98781686856452,3.42974237801871,2.97120960156533,1.83843757322004,1.10115880999389,2.29837208553338,1.38245879930619,3.29715719325485,4.11694396210843,3.12548022334056,1.95428099300967,2.25105044012672,2.13917546887534,4.12480019663135,2.84743361598206,2.23679334990361,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,2.84602214869163,3.20250421973039,3.01570445070875,2.08589184230732,1.53429274398198,2.0778804455956,3.40706652442291,0.203678727700633,0,0,1.26265113531884,0.910843100738926,1.37941262660084,1.80062129805349,2.26057226753573,2.31324097114515,3.33095672740609,3.93547243150861,2.06962696591213,0,1.13463648100692,0.527853372491847,0,0.834141747676794,0,0,0.995171334092466,0,0,0,0.414251545071004,0,0.720248245844059,0.23674473558521,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0,0,0,0,0,2.52347938276953,4.32199371992995,0,0,0.426576501070468,0,0,0.201683524623343,0,0,0,0,0,0,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,2.34423373184406,0,0,0,0.780877488593277,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.584511715822624,0.790575555893047,3.85585579706168,0,0.534196811001766,1.62886959353576,0.329940245945071,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,0,0,1.36175842301515,1.8006109403131,0,2.57204442037911,3.72414490648775,1.60531935841864,1.81003922662333,0.608929898229199,0,0,0,0.16488625294148,0,0,0.477489376012546,0,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.432021363287205,0.627264888043406,0.436725127492355,0.269728692769641,0,0,0,0,0,0,0,0,0.258319646955462,0.506868376472335,0.469428954583016,0,0.104859344425711,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,3.68260189205742,1.71868654031819,2.92150409984269,0.685082519770642,0.755393897389701,2.70009000092722,3.60256962579376,1.81256963593682,1.55328093525546,0.62272408550506,1.19707462020309,2.21953687480374,1.21553358534147,0.838452650511929,0.735374033800057,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.37456602987953,0.448176066834085,0.976402972245426,0.476293691283074,0.579421629724277,0.964546102318525,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.953744759789284,1.16277133305863,1.31753132581463,0.930760686808441,0.73171189149109,1.05227884575137,0.814824683075171,1.68342681497322,0.593175090620871,0.591026894253381,0,0.929621047115796,1.92906610981141,0.249810577937946,0.701794825336225,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p4@Dcc
|short_description=p4@Dcc
}}
}}

Latest revision as of 17:07, 1 October 2015

Short description:p4@Dcc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Dcc_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -68bp_to_ENSMUST00000114943, NM_007831, uc008fop.1, uc008foq.1, uc008for.1, uc008fos.1_5end
EntrezGene:Dcc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Dcc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.56e-4564
neural plate1.56e-4564
presumptive neural plate1.56e-4564
regional part of nervous system8.62e-4254
pre-chordal neural plate8.73e-4149
neural tube1.14e-3952
neural rod1.14e-3952
future spinal cord1.14e-3952
neural keel1.14e-3952
ecto-epithelium3.61e-3873
ectoderm-derived structure2.18e-3795
ectoderm2.18e-3795
presumptive ectoderm2.18e-3795
central nervous system6.44e-3773
nervous system1.47e-3575
brain8.88e-3447
future brain8.88e-3447
anterior neural tube1.91e-3240
regional part of brain2.42e-3246
regional part of forebrain3.71e-3139
forebrain3.71e-3139
future forebrain3.71e-3139
gray matter1.50e-3034
structure with developmental contribution from neural crest2.27e-2792
brain grey matter2.13e-2429
regional part of telencephalon2.13e-2429
telencephalon2.13e-2429
cerebral cortex8.47e-1521
cerebral hemisphere8.47e-1521
pallium8.47e-1521
tube1.65e-11114
basal ganglion3.50e-118
nuclear complex of neuraxis3.50e-118
aggregate regional part of brain3.50e-118
collection of basal ganglia3.50e-118
cerebral subcortex3.50e-118
anatomical conduit5.18e-10122
regional part of cerebral cortex5.68e-1017
eye1.39e-089
camera-type eye1.39e-089
simple eye1.39e-089
immature eye1.39e-089
ocular region1.39e-089
visual system1.39e-089
face1.39e-089
optic cup1.39e-089
optic vesicle1.39e-089
eye primordium1.39e-089
corpus striatum3.76e-085
striatum3.76e-085
ventral part of telencephalon3.76e-085
future corpus striatum3.76e-085
spinal cord3.78e-086
dorsal region element3.78e-086
dorsum3.78e-086
epithelium4.28e-08174
cell layer7.38e-08176
diencephalon1.60e-0710
future diencephalon1.60e-0710
posterior neural tube1.67e-0712
chordal neural plate1.67e-0712
regional part of spinal cord2.31e-075
gray matter of spinal cord2.31e-075
subdivision of head9.89e-0711
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