FFCP PHASE1:Mm9::chr18:75857266..75857280,-: Difference between revisions
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{{FFCP|EntrezGene=269037|HGNC=|UniProt=E9Q1U6|association_with_transcript=-58bp_to_ENSMUST00000065082_5end|description=CAGE_peak_5_at_Ctif_5end|id=chr18:75857266..75857280,-|ontology_enrichment_celltype=CL:0002319!1.19e-14!43;CL:0000221!1.27e-14!44;CL:0000133!1.27e-14!44;CL:0000117!1.42e-14!23;CL:0000337!1.42e-14!23;CL:0000055!6.57e-13!50;CL:0000540!4.39e-12!33;CL:0000047!4.39e-12!33;CL:0000031!4.39e-12!33;CL:0000404!4.39e-12!33;CL:0002321!1.00e-10!70;CL:0000220!1.00e-10!70;CL:0000393!3.91e-10!39;CL:0000211!3.91e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.87e-24,23;CL:0000337,4.87e-24,23;CL:0002319,2.03e-18,43;CL:0000221,9.44e-18,44;CL:0000133,9.44e-18,44;CL:0000540,2.33e-15,33;CL:0000047,2.33e-15,33;CL:0000031,2.33e-15,33;CL:0000404,2.33e-15,33;CL:0002321,1.81e-14,70;CL:0000393,5.76e-13,39;CL:0000211,5.76e-13,39;CL:0002609,3.74e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.06e-24!73;UBERON:0005743!8.06e-24!73;UBERON:0000073!3.16e-23!75;UBERON:0001016!3.16e-23!75;UBERON:0004121!1.00e-20!102;UBERON:0000924!1.00e-20!102;UBERON:0006601!1.00e-20!102;UBERON:0001049!1.40e-18!52;UBERON:0005068!1.40e-18!52;UBERON:0006241!1.40e-18!52;UBERON:0007135!1.40e-18!52;UBERON:0000955!1.73e-17!50;UBERON:0006238!1.73e-17!50;UBERON:0000033!3.21e-17!63;UBERON:0002616!3.96e-17!49;UBERON:0002346!5.24e-16!71;UBERON:0003075!5.24e-16!71;UBERON:0007284!5.24e-16!71;UBERON:0002020!5.55e-16!34;UBERON:0002791!2.69e-13!29;UBERON:0003528!2.69e-13!29;UBERON:0001893!2.69e-13!29;UBERON:0003056!3.80e-13!49;UBERON:0003080!1.24e-12!40;UBERON:0002780!3.85e-12!39;UBERON:0001890!3.85e-12!39;UBERON:0006240!3.85e-12!39;UBERON:0000025!3.59e-10!114;UBERON:0004111!7.64e-10!122;UBERON:0000956!7.54e-09!21;UBERON:0001869!7.54e-09!21;UBERON:0000203!7.54e-09!21;UBERON:0007811!1.64e-07!86;UBERON:0000153!2.77e-07!94;UBERON:0003076!6.02e-07!12;UBERON:0003057!6.02e-07!12;UBERON:0002619!7.77e-07!17;UBERON:0000468!8.02e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.35e-32,73;UBERON:0001016,5.28e-31,75;UBERON:0000073,5.30e-30,54;UBERON:0001049,9.26e-28,52;UBERON:0005068,9.26e-28,52;UBERON:0006241,9.26e-28,52;UBERON:0007135,9.26e-28,52;UBERON:0004121,5.65e-25,95;UBERON:0000924,5.65e-25,95;UBERON:0006601,5.65e-25,95;UBERON:0002020,2.21e-24,34;UBERON:0002346,1.75e-23,64;UBERON:0003075,1.75e-23,64;UBERON:0007284,1.75e-23,64;UBERON:0000955,9.55e-23,47;UBERON:0006238,9.55e-23,47;UBERON:0002616,3.78e-22,46;UBERON:0010371,8.25e-20,73;UBERON:0003528,8.44e-20,29;UBERON:0002791,8.44e-20,29;UBERON:0001893,8.44e-20,29;UBERON:0003080,1.12e-18,40;UBERON:0002780,7.57e-18,39;UBERON:0001890,7.57e-18,39;UBERON:0006240,7.57e-18,39;UBERON:0003056,1.13e-16,49;UBERON:0010314,2.27e-14,92;UBERON:0000956,2.64e-12,21;UBERON:0001869,2.64e-12,21;UBERON:0000203,2.64e-12,21;UBERON:0000025,1.39e-11,114;UBERON:0004111,5.91e-11,122;UBERON:0003076,9.53e-10,12;UBERON:0003057,9.53e-10,12;UBERON:0002420,5.03e-09,8;UBERON:0007245,5.03e-09,8;UBERON:0010009,5.03e-09,8;UBERON:0010011,5.03e-09,8;UBERON:0000454,5.03e-09,8;UBERON:0002619,5.79e-09,17;UBERON:0011216,1.48e-07,194;UBERON:0002240,7.63e-07,6;UBERON:0005174,7.63e-07,6;UBERON:0001137,7.63e-07,6|phase1_expression=0.960893082628764,0,0,0.60492842261366,0.500895729946347,0.671517087647559,0,0,0.422366166455,0,0.171217968225505,0,0,0,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0,0.183546752161682,0.782391344348039,1.96222640742402,1.31811709640683,1.36100929351998,1.53985063787899,2.87505128729943,0,0,0,0.514518872071894,0.286533439938757,2.06268836910977,3.84401275633236,3.1739458756322,5.70448263155561,0.677689064138264,1.77858959222228,0,0.988866362566974,0,1.49800055259202,2.68952813725088,1.55534418462716,4.45519596494579,3.57552434297349,3.42781181284564,1.10434270475807,1.71487118900936,4.12135525378416,6.43453150627015,2.20231761998777,6.38436690425939,7.83393319606842,1.97829431595291,6.67859798297591,4.68822033501084,5.02529398202486,1.68828783009504,4.27835093775068,3.53554302568401,3.55929201997757,4.47358669980721,0.227178579999552,0.68014404096107,0.579728977403356,0.860423876981386,1.3599426674155,1.07940638327563,1.29955283489534,2.68816132258401,0.280888840263504,0.340860645156116,1.29893002301434,0.70667914902068,0.704217098883403,0,5.09610479413291,7.11066703153331,0.432982082022428,0.253359865475099,1.51657333504435,0.34255163915718,0.258937883647172,0.148442139064825,0,0.608930956624282,0,0.753613202763113,0.940709657085638,0.628332956648377,0,1.15679485535929,0,0.161766849947409,0.883366073841574,0.969750506270444,0,2.34224637609238,1.67557365450764,1.02182822083437,0,0.599902730993408,0,2.09706895166752,2.28750301409313,1.7591609295801,1.91206752211504,1.27857728665165,5.61027720310812,1.62241263067758,0.509196819251581,0.746441823660558,0.252722758433675,0.420883711772948,1.3012044296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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269037 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E9Q1U6 | |||
|association_with_transcript=-58bp_to_ENSMUST00000065082_5end | |||
|cluster_id=chr18:75857266..75857280,- | |||
|description=CAGE_peak_5_at_Ctif_5end | |||
|id=chr18:75857266..75857280,- | |||
|ontology_enrichment_celltype=CL:0002319!1.19e-14!43;CL:0000221!1.27e-14!44;CL:0000133!1.27e-14!44;CL:0000117!1.42e-14!23;CL:0000337!1.42e-14!23;CL:0000055!6.57e-13!50;CL:0000540!4.39e-12!33;CL:0000047!4.39e-12!33;CL:0000031!4.39e-12!33;CL:0000404!4.39e-12!33;CL:0002321!1.00e-10!70;CL:0000220!1.00e-10!70;CL:0000393!3.91e-10!39;CL:0000211!3.91e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.87e-24,23;CL:0000337,4.87e-24,23;CL:0002319,2.03e-18,43;CL:0000221,9.44e-18,44;CL:0000133,9.44e-18,44;CL:0000540,2.33e-15,33;CL:0000047,2.33e-15,33;CL:0000031,2.33e-15,33;CL:0000404,2.33e-15,33;CL:0002321,1.81e-14,70;CL:0000393,5.76e-13,39;CL:0000211,5.76e-13,39;CL:0002609,3.74e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.06e-24!73;UBERON:0005743!8.06e-24!73;UBERON:0000073!3.16e-23!75;UBERON:0001016!3.16e-23!75;UBERON:0004121!1.00e-20!102;UBERON:0000924!1.00e-20!102;UBERON:0006601!1.00e-20!102;UBERON:0001049!1.40e-18!52;UBERON:0005068!1.40e-18!52;UBERON:0006241!1.40e-18!52;UBERON:0007135!1.40e-18!52;UBERON:0000955!1.73e-17!50;UBERON:0006238!1.73e-17!50;UBERON:0000033!3.21e-17!63;UBERON:0002616!3.96e-17!49;UBERON:0002346!5.24e-16!71;UBERON:0003075!5.24e-16!71;UBERON:0007284!5.24e-16!71;UBERON:0002020!5.55e-16!34;UBERON:0002791!2.69e-13!29;UBERON:0003528!2.69e-13!29;UBERON:0001893!2.69e-13!29;UBERON:0003056!3.80e-13!49;UBERON:0003080!1.24e-12!40;UBERON:0002780!3.85e-12!39;UBERON:0001890!3.85e-12!39;UBERON:0006240!3.85e-12!39;UBERON:0000025!3.59e-10!114;UBERON:0004111!7.64e-10!122;UBERON:0000956!7.54e-09!21;UBERON:0001869!7.54e-09!21;UBERON:0000203!7.54e-09!21;UBERON:0007811!1.64e-07!86;UBERON:0000153!2.77e-07!94;UBERON:0003076!6.02e-07!12;UBERON:0003057!6.02e-07!12;UBERON:0002619!7.77e-07!17;UBERON:0000468!8.02e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.35e-32,73;UBERON:0001016,5.28e-31,75;UBERON:0000073,5.30e-30,54;UBERON:0001049,9.26e-28,52;UBERON:0005068,9.26e-28,52;UBERON:0006241,9.26e-28,52;UBERON:0007135,9.26e-28,52;UBERON:0004121,5.65e-25,95;UBERON:0000924,5.65e-25,95;UBERON:0006601,5.65e-25,95;UBERON:0002020,2.21e-24,34;UBERON:0002346,1.75e-23,64;UBERON:0003075,1.75e-23,64;UBERON:0007284,1.75e-23,64;UBERON:0000955,9.55e-23,47;UBERON:0006238,9.55e-23,47;UBERON:0002616,3.78e-22,46;UBERON:0010371,8.25e-20,73;UBERON:0003528,8.44e-20,29;UBERON:0002791,8.44e-20,29;UBERON:0001893,8.44e-20,29;UBERON:0003080,1.12e-18,40;UBERON:0002780,7.57e-18,39;UBERON:0001890,7.57e-18,39;UBERON:0006240,7.57e-18,39;UBERON:0003056,1.13e-16,49;UBERON:0010314,2.27e-14,92;UBERON:0000956,2.64e-12,21;UBERON:0001869,2.64e-12,21;UBERON:0000203,2.64e-12,21;UBERON:0000025,1.39e-11,114;UBERON:0004111,5.91e-11,122;UBERON:0003076,9.53e-10,12;UBERON:0003057,9.53e-10,12;UBERON:0002420,5.03e-09,8;UBERON:0007245,5.03e-09,8;UBERON:0010009,5.03e-09,8;UBERON:0010011,5.03e-09,8;UBERON:0000454,5.03e-09,8;UBERON:0002619,5.79e-09,17;UBERON:0011216,1.48e-07,194;UBERON:0002240,7.63e-07,6;UBERON:0005174,7.63e-07,6;UBERON:0001137,7.63e-07,6 | |||
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| |||
|short_description=p5@Ctif | |||
}} |
Latest revision as of 17:42, 1 October 2015
Short description: | p5@Ctif |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ctif_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENSMUST00000065082_5end |
EntrezGene: | Ctif |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.87e-24 | 23 |
neuroblast (sensu Vertebrata) | 4.87e-24 | 23 |
neural cell | 2.03e-18 | 43 |
ectodermal cell | 9.44e-18 | 44 |
neurectodermal cell | 9.44e-18 | 44 |
neuron | 2.33e-15 | 33 |
neuronal stem cell | 2.33e-15 | 33 |
neuroblast | 2.33e-15 | 33 |
electrically signaling cell | 2.33e-15 | 33 |
embryonic cell | 1.81e-14 | 70 |
electrically responsive cell | 5.76e-13 | 39 |
electrically active cell | 5.76e-13 | 39 |
neuron of cerebral cortex | 3.74e-07 | 6 |