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FFCP PHASE1:Mm9::chr8:128422191..128422222,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=270109
|EntrezGene=270109
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q5DU28
|UniProt=Q5DU28
|association_with_transcript=0bp_to_ENSMUST00000047239,NM_175561,uc009nyn.1,uc012gnd.1_5end
|association_with_transcript=0bp_to_ENSMUST00000047239,NM_175561,uc009nyn.1,uc012gnd.1_5end
|cluster_id=chr8:128422191..128422222,-
|description=CAGE_peak_1_at_Pcnxl2_5end
|description=CAGE_peak_1_at_Pcnxl2_5end
|id=chr8:128422191..128422222,-
|id=chr8:128422191..128422222,-
|ontology_enrichment_celltype=CL:0000540!1.67e-15!33;CL:0000047!1.67e-15!33;CL:0000031!1.67e-15!33;CL:0000404!1.67e-15!33;CL:0000117!3.94e-15!23;CL:0000337!3.94e-15!23;CL:0000393!4.41e-11!39;CL:0000211!4.41e-11!39;CL:0000221!2.61e-10!44;CL:0000133!2.61e-10!44;CL:0002319!4.24e-10!43;CL:0000055!5.11e-07!50
|ontology_enrichment_celltype=CL:0000540!1.67e-15!33;CL:0000047!1.67e-15!33;CL:0000031!1.67e-15!33;CL:0000404!1.67e-15!33;CL:0000117!3.94e-15!23;CL:0000337!3.94e-15!23;CL:0000393!4.41e-11!39;CL:0000211!4.41e-11!39;CL:0000221!2.61e-10!44;CL:0000133!2.61e-10!44;CL:0002319!4.24e-10!43;CL:0000055!5.11e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-20,23;CL:0000337,2.83e-20,23;CL:0000540,5.69e-15,33;CL:0000047,5.69e-15,33;CL:0000031,5.69e-15,33;CL:0000404,5.69e-15,33;CL:0000393,2.27e-11,39;CL:0000211,2.27e-11,39;CL:0002319,1.44e-09,43;CL:0000221,3.57e-09,44;CL:0000133,3.57e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.70e-29!73;UBERON:0005743!1.70e-29!73;UBERON:0002346!1.99e-29!71;UBERON:0003075!1.99e-29!71;UBERON:0007284!1.99e-29!71;UBERON:0000073!9.53e-29!75;UBERON:0001016!9.53e-29!75;UBERON:0004121!1.92e-26!102;UBERON:0000924!1.92e-26!102;UBERON:0006601!1.92e-26!102;UBERON:0000033!3.93e-26!63;UBERON:0001049!1.74e-25!52;UBERON:0005068!1.74e-25!52;UBERON:0006241!1.74e-25!52;UBERON:0007135!1.74e-25!52;UBERON:0000955!2.39e-24!50;UBERON:0006238!2.39e-24!50;UBERON:0002616!1.27e-23!49;UBERON:0003056!7.42e-23!49;UBERON:0002020!9.71e-21!34;UBERON:0003080!5.77e-20!40;UBERON:0002780!3.55e-19!39;UBERON:0001890!3.55e-19!39;UBERON:0006240!3.55e-19!39;UBERON:0002791!1.60e-17!29;UBERON:0003528!1.60e-17!29;UBERON:0001893!1.60e-17!29;UBERON:0007811!2.48e-14!86;UBERON:0000956!2.94e-12!21;UBERON:0001869!2.94e-12!21;UBERON:0000203!2.94e-12!21;UBERON:0000153!1.13e-11!94;UBERON:0002619!6.28e-10!17;UBERON:0002021!1.72e-09!10;UBERON:0000411!1.72e-09!10;UBERON:0001950!1.72e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.38e-34,54;UBERON:0002346,6.90e-32,64;UBERON:0003075,6.90e-32,64;UBERON:0007284,6.90e-32,64;UBERON:0001049,1.20e-31,52;UBERON:0005068,1.20e-31,52;UBERON:0006241,1.20e-31,52;UBERON:0007135,1.20e-31,52;UBERON:0001017,2.41e-31,73;UBERON:0001016,5.19e-30,75;UBERON:0002020,1.08e-28,34;UBERON:0000955,5.22e-27,47;UBERON:0006238,5.22e-27,47;UBERON:0004121,3.85e-26,95;UBERON:0000924,3.85e-26,95;UBERON:0006601,3.85e-26,95;UBERON:0002616,4.72e-26,46;UBERON:0010371,8.53e-26,73;UBERON:0003056,1.03e-24,49;UBERON:0003528,3.12e-24,29;UBERON:0002791,3.12e-24,29;UBERON:0001893,3.12e-24,29;UBERON:0003080,1.61e-23,40;UBERON:0002780,1.82e-22,39;UBERON:0001890,1.82e-22,39;UBERON:0006240,1.82e-22,39;UBERON:0010314,9.25e-18,92;UBERON:0000956,6.22e-17,21;UBERON:0001869,6.22e-17,21;UBERON:0000203,6.22e-17,21;UBERON:0002619,1.04e-13,17;UBERON:0002021,1.70e-12,10;UBERON:0000411,1.70e-12,10;UBERON:0001950,1.70e-12,10;UBERON:0002420,2.06e-08,8;UBERON:0007245,2.06e-08,8;UBERON:0010009,2.06e-08,8;UBERON:0010011,2.06e-08,8;UBERON:0000454,2.06e-08,8;UBERON:0003076,2.07e-08,12;UBERON:0003057,2.07e-08,12;UBERON:0000025,9.68e-07,114
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69493507722195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91350658212029,8.99284664762456,8.23980824558033,0,0,0,0,0,0.299600110518405,0,3.83651565541367,3.64516033495565,3.99617426567626,9.99778445413313,10.1599528837742,4.04219637409348,5.46319184803947,6.43453150627015,35.2370819198044,29.240400421508,28.417208652405,11.8697658957174,10.7040543014819,6.77187381723788,25.1264699101243,15.757353080887,23.5309301576288,10.606629077052,8.68467252874528,11.7431650869939,0,0.226714680320357,0,0,0,0,0,0,1.96622188184453,0,0,0,0.704217098883403,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0.867426633830679,1.21786191324856,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,54.1644474471362,38.3287473468623,0,0,0,0,36.5489160147767,28.8225379775735,11.8115090986093,45.889620530761,51.6545223807268,31.5837827730531,31.9615288243483,0.203678727700633,0,0.252722758433675,1.89397670297827,0.390361328888111,0.229902104433473,0.360124259610698,1.50704817835715,2.51735046859913,2.69038812598185,1.96773621575431,5.17406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.8052319760039,5.24813523134351,0,0,0,0.232236671860439,0.644337306610467,0,0.667134131534611,0.951128130562796,0,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1972756673997,29.3029216480508,0,0,0.94652465824877,0.780877488593277,1.29254038639679,0,0.445597348164788,0.283076530788832,0.404810701674894,1.46127928955656,1.97643888973262,22.1711708331047,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0.680879211507576,1.26042765821917,0.258717367565509,0.214337035031592,0,2.31879462882692,0.987294123612726,1.2178597964584,0,0,0,0,0,0,0,0,0,32.6348531538497,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.655087691238533,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0,0,0.777804753376191,0.387479470433193,0.337912250981556,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0.537080087002444,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,37.8383734553435,35.9053684475598,45.8316410751517,45.8847996857646,46.5856113444037,37.0143009720953,40.5013500139084,43.2308355095252,40.3296743995942,46.5984280576638,0.207574695168353,1.19707462020309,2.56100408631201,2.43106717068294,0.628839487883947,1.65459157605013,2.00022055021454,3.29656091582231,2.24643446714271,2.27427490587418,1.77435509923168,1.88626341386076,2.52832070168682,2.81710670581425,1.66562859971278,2.85776214769844,2.43357084484197,2.50781986602817,2.47251540481984,1.91358596174717,1.71434626192708,0.354951612318675,0.953744759789284,2.47088908274958,2.07040636913727,1.77690676572521,2.37806364734604,2.10455769150274,1.7654534799962,1.12228454331548,2.37270036248348,1.37906275325789,1.63692417267876,2.63392630016142,1.15743966588685,8.74337022782811,1.63752125911786,1.71896843238639,0.956441660344217,0.661774257358546,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69493507722195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91350658212029,8.99284664762456,8.23980824558033,0,0,0,0,0,0.299600110518405,0,3.83651565541367,3.64516033495565,3.99617426567626,9.99778445413313,10.1599528837742,4.04219637409348,5.46319184803947,6.43453150627015,35.2370819198044,29.240400421508,28.417208652405,11.8697658957174,10.7040543014819,6.77187381723788,25.1264699101243,15.757353080887,23.5309301576288,10.606629077052,8.68467252874528,11.7431650869939,0,0.226714680320357,0,0,0,0,0,0,1.96622188184453,0,0,0,0.704217098883403,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0.867426633830679,1.21786191324856,0.230615497256059,0.301445281105245,0.352766121407114,0,0,0,0,0,0,0,0,54.1644474471362,38.3287473468623,0,0,0,0,36.5489160147767,28.8225379775735,11.8115090986093,45.889620530761,51.6545223807268,31.5837827730531,31.9615288243483,0.203678727700633,0,0.252722758433675,1.89397670297827,0.390361328888111,0.229902104433473,0.360124259610698,1.50704817835715,2.51735046859913,2.69038812598185,1.96773621575431,5.17406741478031,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.8052319760039,5.24813523134351,0,0,0,0.232236671860439,0.644337306610467,0,0.667134131534611,0.951128130562796,0,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1972756673997,29.3029216480508,0,0,0.94652465824877,0.780877488593277,1.29254038639679,0,0.445597348164788,0.283076530788832,0.404810701674894,1.46127928955656,1.97643888973262,22.1711708331047,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0.680879211507576,1.26042765821917,0.258717367565509,0.214337035031592,0,2.31879462882692,0.987294123612726,1.2178597964584,0,0,0,0,0,0,0,0,0,32.6348531538497,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.655087691238533,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0,0,0.777804753376191,0.387479470433193,0.337912250981556,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0.537080087002444,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,0,0,37.8383734553435,35.9053684475598,45.8316410751517,45.8847996857646,46.5856113444037,37.0143009720953,40.5013500139084,43.2308355095252,40.3296743995942,46.5984280576638,0.207574695168353,1.19707462020309,2.56100408631201,2.43106717068294,0.628839487883947,1.65459157605013,2.00022055021454,3.29656091582231,2.24643446714271,2.27427490587418,1.77435509923168,1.88626341386076,2.52832070168682,2.81710670581425,1.66562859971278,2.85776214769844,2.43357084484197,2.50781986602817,2.47251540481984,1.91358596174717,1.71434626192708,0.354951612318675,0.953744759789284,2.47088908274958,2.07040636913727,1.77690676572521,2.37806364734604,2.10455769150274,1.7654534799962,1.12228454331548,2.37270036248348,1.37906275325789,1.63692417267876,2.63392630016142,1.15743966588685,8.74337022782811,1.63752125911786,1.71896843238639,0.956441660344217,0.661774257358546,0.231867835620421
|short_description=p1@Pcnxl2
|short_description=p1@Pcnxl2
}}
}}

Latest revision as of 17:51, 1 October 2015

Short description:p1@Pcnxl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcnxl2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000047239, NM_175561, uc009nyn.1, uc012gnd.1_5end
EntrezGene:Pcnxl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pcnxl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D335.24
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F329.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.87
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B254.16
cerebellum, neonate N30.CNhs11135.1395-42I238.33
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A436.55
corpus striatum, adult.CNhs10487.19-21D828.82
corpus striatum, neonate N00.CNhs11226.630-43F111.81
cortex, adult.CNhs10473.12-14D545.89
cortex, neonate N30.CNhs11107.1392-42F251.65
diencephalon, adult.CNhs10482.20-12F231.58
diencephalon, neonate N30.CNhs11201.1388-42B231.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E832.81
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C234.20
medulla oblongata, neonate N30.CNhs11200.1396-42A329.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I922.17
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C932.63
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.84
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.83
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D745.88
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A446.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A640.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A743.23
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A840.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.60
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.83e-2023
neuroblast (sensu Vertebrata)2.83e-2023
neuron5.69e-1533
neuronal stem cell5.69e-1533
neuroblast5.69e-1533
electrically signaling cell5.69e-1533
electrically responsive cell2.27e-1139
electrically active cell2.27e-1139
neural cell1.44e-0943
ectodermal cell3.57e-0944
neurectodermal cell3.57e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.38e-3454
neurectoderm6.90e-3264
neural plate6.90e-3264
presumptive neural plate6.90e-3264
neural tube1.20e-3152
neural rod1.20e-3152
future spinal cord1.20e-3152
neural keel1.20e-3152
central nervous system2.41e-3173
nervous system5.19e-3075
gray matter1.08e-2834
brain5.22e-2747
future brain5.22e-2747
ectoderm-derived structure3.85e-2695
ectoderm3.85e-2695
presumptive ectoderm3.85e-2695
regional part of brain4.72e-2646
ecto-epithelium8.53e-2673
pre-chordal neural plate1.03e-2449
brain grey matter3.12e-2429
regional part of telencephalon3.12e-2429
telencephalon3.12e-2429
anterior neural tube1.61e-2340
regional part of forebrain1.82e-2239
forebrain1.82e-2239
future forebrain1.82e-2239
structure with developmental contribution from neural crest9.25e-1892
cerebral cortex6.22e-1721
cerebral hemisphere6.22e-1721
pallium6.22e-1721
regional part of cerebral cortex1.04e-1317
occipital lobe1.70e-1210
visual cortex1.70e-1210
neocortex1.70e-1210
basal ganglion2.06e-088
nuclear complex of neuraxis2.06e-088
aggregate regional part of brain2.06e-088
collection of basal ganglia2.06e-088
cerebral subcortex2.06e-088
posterior neural tube2.07e-0812
chordal neural plate2.07e-0812
tube9.68e-07114
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