FFCP PHASE1:Mm9::chr6:77192638..77192691,+: Difference between revisions
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{{FFCP|EntrezGene=74342|HGNC=|MCL_coexpression_id=1|UniProt=Q8K377|association_with_transcript=0bp_to_ENSMUST00000020400,ENSMUST00000159616_5end|description=CAGE_peak_1_at_Lrrtm1_5end|id=chr6:77192638..77192691,+|ontology_enrichment_celltype=CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0000540!8.45e-13!33;CL:0000047!8.45e-13!33;CL:0000031!8.45e-13!33;CL:0000404!8.45e-13!33;CL:0000221!2.70e-09!44;CL:0000133!2.70e-09!44;CL:0002319!7.87e-09!43;CL:0000393!1.76e-08!39;CL:0000211!1.76e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-17,23;CL:0000337,1.12e-17,23;CL:0000540,9.34e-15,33;CL:0000047,9.34e-15,33;CL:0000031,9.34e-15,33;CL:0000404,9.34e-15,33;CL:0000393,8.50e-11,39;CL:0000211,8.50e-11,39;CL:0000221,5.50e-10,44;CL:0000133,5.50e-10,44;CL:0002319,1.98e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.01e-27!71;UBERON:0003075!7.01e-27!71;UBERON:0007284!7.01e-27!71;UBERON:0000033!3.93e-25!63;UBERON:0001017!1.54e-24!73;UBERON:0005743!1.54e-24!73;UBERON:0004121!2.18e-24!102;UBERON:0000924!2.18e-24!102;UBERON:0006601!2.18e-24!102;UBERON:0000073!3.34e-24!75;UBERON:0001016!3.34e-24!75;UBERON:0001049!6.78e-23!52;UBERON:0005068!6.78e-23!52;UBERON:0006241!6.78e-23!52;UBERON:0007135!6.78e-23!52;UBERON:0003056!2.29e-22!49;UBERON:0000955!5.57e-22!50;UBERON:0006238!5.57e-22!50;UBERON:0002616!2.54e-21!49;UBERON:0002020!1.87e-19!34;UBERON:0003080!1.20e-18!40;UBERON:0002780!5.28e-18!39;UBERON:0001890!5.28e-18!39;UBERON:0006240!5.28e-18!39;UBERON:0002791!2.75e-16!29;UBERON:0003528!2.75e-16!29;UBERON:0001893!2.75e-16!29;UBERON:0000153!3.00e-12!94;UBERON:0000956!9.38e-12!21;UBERON:0001869!9.38e-12!21;UBERON:0000203!9.38e-12!21;UBERON:0007811!1.20e-11!86;UBERON:0002619!2.13e-09!17;UBERON:0002021!1.71e-08!10;UBERON:0000411!1.71e-08!10;UBERON:0001950!1.71e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.54e-33,64;UBERON:0003075,2.54e-33,64;UBERON:0007284,2.54e-33,64;UBERON:0000073,6.16e-30,54;UBERON:0001017,9.77e-30,73;UBERON:0010371,4.45e-29,73;UBERON:0001016,2.77e-28,75;UBERON:0004121,7.90e-28,95;UBERON:0000924,7.90e-28,95;UBERON:0006601,7.90e-28,95;UBERON:0001049,9.63e-28,52;UBERON:0005068,9.63e-28,52;UBERON:0006241,9.63e-28,52;UBERON:0007135,9.63e-28,52;UBERON:0003056,1.17e-27,49;UBERON:0002020,5.73e-24,34;UBERON:0000955,8.44e-24,47;UBERON:0006238,8.44e-24,47;UBERON:0002616,5.39e-23,46;UBERON:0003080,5.79e-23,40;UBERON:0002780,3.76e-22,39;UBERON:0001890,3.76e-22,39;UBERON:0006240,3.76e-22,39;UBERON:0003528,5.70e-20,29;UBERON:0002791,5.70e-20,29;UBERON:0001893,5.70e-20,29;UBERON:0010314,9.56e-20,92;UBERON:0000956,2.95e-14,21;UBERON:0001869,2.95e-14,21;UBERON:0000203,2.95e-14,21;UBERON:0002619,2.72e-11,17;UBERON:0002021,2.66e-10,10;UBERON:0000411,2.66e-10,10;UBERON:0001950,2.66e-10,10;UBERON:0002420,6.67e-07,8;UBERON:0007245,6.67e-07,8;UBERON:0010009,6.67e-07,8;UBERON:0010011,6.67e-07,8;UBERON:0000454,6.67e-07,8|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0,0,0,0,0,0,0,0,0,14.566785181891,14.2827564403449,12.0427966666174,0.677689064138264,0,0,0,0,1.19840044207362,0,12.6501327016343,15.3906769698127,14.5124223332454,22.2807767834967,27.3876990780001,6.98197555525238,4.60058260887535,9.19218786610021,30.8324466798288,56.437803433653,49.0004841087417,9.89147157976454,10.9785172322892,8.85552729946492,13.959149950069,9.56696437053856,14.6686317865738,25.3380583507354,15.8032565687004,10.8111678578674,0.151452386666368,0.68014404096107,0,0,0,0,0,0,0.842666520790511,0,0,0,12.2533775205712,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,2.77576522825817,0.913396434936424,1.38369298353635,0.301445281105245,0.587943535678524,0.376999773989026,0,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,1.46390398505774,3.14170060220183,0.255457055208591,0,0,0,18.2744580073884,34.7700458142156,13.8219787324151,31.6360262749943,24.8043993610421,47.5834622041393,34.5573890334324,1.52759045775474,0.248813941220186,1.0108910337347,2.10441855886474,1.82168620147785,4.36813998423599,4.50155324513373,3.76762044589288,6.12328492361951,9.35230158079403,6.74652416830048,4.39795730256327,0.431135985865684,1.89106080167819,0.879755620819744,1.97276159184817,2.50242524303038,1.39300866608867,0.61734640922383,3.58261680273288,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,60.7737951350328,33.3410944108882,0,0,0.639864751605702,2.32236671860439,1.03093969057675,0.80673409849337,1.55664630691409,0.380451252225118,0,0.823494773620054,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,2.46568271239006,1.94222471436539,2.25415471346161,0.610953983535943,0.387904974335251,0.561086559122548,8.09427675190493,0.147610147979602,0.784993639206874,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74342 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K377 | |||
|association_with_transcript=0bp_to_ENSMUST00000020400,ENSMUST00000159616_5end | |||
|cluster_id=chr6:77192638..77192691,+ | |||
|description=CAGE_peak_1_at_Lrrtm1_5end | |||
|id=chr6:77192638..77192691,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0000540!8.45e-13!33;CL:0000047!8.45e-13!33;CL:0000031!8.45e-13!33;CL:0000404!8.45e-13!33;CL:0000221!2.70e-09!44;CL:0000133!2.70e-09!44;CL:0002319!7.87e-09!43;CL:0000393!1.76e-08!39;CL:0000211!1.76e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-17,23;CL:0000337,1.12e-17,23;CL:0000540,9.34e-15,33;CL:0000047,9.34e-15,33;CL:0000031,9.34e-15,33;CL:0000404,9.34e-15,33;CL:0000393,8.50e-11,39;CL:0000211,8.50e-11,39;CL:0000221,5.50e-10,44;CL:0000133,5.50e-10,44;CL:0002319,1.98e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.01e-27!71;UBERON:0003075!7.01e-27!71;UBERON:0007284!7.01e-27!71;UBERON:0000033!3.93e-25!63;UBERON:0001017!1.54e-24!73;UBERON:0005743!1.54e-24!73;UBERON:0004121!2.18e-24!102;UBERON:0000924!2.18e-24!102;UBERON:0006601!2.18e-24!102;UBERON:0000073!3.34e-24!75;UBERON:0001016!3.34e-24!75;UBERON:0001049!6.78e-23!52;UBERON:0005068!6.78e-23!52;UBERON:0006241!6.78e-23!52;UBERON:0007135!6.78e-23!52;UBERON:0003056!2.29e-22!49;UBERON:0000955!5.57e-22!50;UBERON:0006238!5.57e-22!50;UBERON:0002616!2.54e-21!49;UBERON:0002020!1.87e-19!34;UBERON:0003080!1.20e-18!40;UBERON:0002780!5.28e-18!39;UBERON:0001890!5.28e-18!39;UBERON:0006240!5.28e-18!39;UBERON:0002791!2.75e-16!29;UBERON:0003528!2.75e-16!29;UBERON:0001893!2.75e-16!29;UBERON:0000153!3.00e-12!94;UBERON:0000956!9.38e-12!21;UBERON:0001869!9.38e-12!21;UBERON:0000203!9.38e-12!21;UBERON:0007811!1.20e-11!86;UBERON:0002619!2.13e-09!17;UBERON:0002021!1.71e-08!10;UBERON:0000411!1.71e-08!10;UBERON:0001950!1.71e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.54e-33,64;UBERON:0003075,2.54e-33,64;UBERON:0007284,2.54e-33,64;UBERON:0000073,6.16e-30,54;UBERON:0001017,9.77e-30,73;UBERON:0010371,4.45e-29,73;UBERON:0001016,2.77e-28,75;UBERON:0004121,7.90e-28,95;UBERON:0000924,7.90e-28,95;UBERON:0006601,7.90e-28,95;UBERON:0001049,9.63e-28,52;UBERON:0005068,9.63e-28,52;UBERON:0006241,9.63e-28,52;UBERON:0007135,9.63e-28,52;UBERON:0003056,1.17e-27,49;UBERON:0002020,5.73e-24,34;UBERON:0000955,8.44e-24,47;UBERON:0006238,8.44e-24,47;UBERON:0002616,5.39e-23,46;UBERON:0003080,5.79e-23,40;UBERON:0002780,3.76e-22,39;UBERON:0001890,3.76e-22,39;UBERON:0006240,3.76e-22,39;UBERON:0003528,5.70e-20,29;UBERON:0002791,5.70e-20,29;UBERON:0001893,5.70e-20,29;UBERON:0010314,9.56e-20,92;UBERON:0000956,2.95e-14,21;UBERON:0001869,2.95e-14,21;UBERON:0000203,2.95e-14,21;UBERON:0002619,2.72e-11,17;UBERON:0002021,2.66e-10,10;UBERON:0000411,2.66e-10,10;UBERON:0001950,2.66e-10,10;UBERON:0002420,6.67e-07,8;UBERON:0007245,6.67e-07,8;UBERON:0010009,6.67e-07,8;UBERON:0010011,6.67e-07,8;UBERON:0000454,6.67e-07,8 | |||
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0,0,0,0,0,0,0,0,0,14.566785181891,14.2827564403449,12.0427966666174,0.677689064138264,0,0,0,0,1.19840044207362,0,12.6501327016343,15.3906769698127,14.5124223332454,22.2807767834967,27.3876990780001,6.98197555525238,4.60058260887535,9.19218786610021,30.8324466798288,56.437803433653,49.0004841087417,9.89147157976454,10.9785172322892,8.85552729946492,13.959149950069,9.56696437053856,14.6686317865738,25.3380583507354,15.8032565687004,10.8111678578674,0.151452386666368,0.68014404096107,0,0,0,0,0,0,0.842666520790511,0,0,0,12.2533775205712,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,2.77576522825817,0.913396434936424,1.38369298353635,0.301445281105245,0.587943535678524,0.376999773989026,0,0,0,0.323533699894818,0.220841518460394,0,1.86391761218122,1.46390398505774,3.14170060220183,0.255457055208591,0,0,0,18.2744580073884,34.7700458142156,13.8219787324151,31.6360262749943,24.8043993610421,47.5834622041393,34.5573890334324,1.52759045775474,0.248813941220186,1.0108910337347,2.10441855886474,1.82168620147785,4.36813998423599,4.50155324513373,3.76762044589288,6.12328492361951,9.35230158079403,6.74652416830048,4.39795730256327,0.431135985865684,1.89106080167819,0.879755620819744,1.97276159184817,2.50242524303038,1.39300866608867,0.61734640922383,3.58261680273288,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,60.7737951350328,33.3410944108882,0,0,0.639864751605702,2.32236671860439,1.03093969057675,0.80673409849337,1.55664630691409,0.380451252225118,0,0.823494773620054,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,2.46568271239006,1.94222471436539,2.25415471346161,0.610953983535943,0.387904974335251,0.561086559122548,8.09427675190493,0.147610147979602,0.784993639206874,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0,6.74312477948726,8.08760637486202,0,0,1.26203287766503,1.95219372148319,1.29254038639679,0,0,0.849229592366497,1.61924280669958,1.16902343164525,0.790575555893047,16.708708453934,0,6.41036173202119,3.09485222771795,1.48473110675282,0,1.21390318077491,1.209294227859,0.565815239267694,1.18120757152309,0,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,1.02131881726136,1.44048875225048,1.55230420539305,1.07168517515796,1.06404140185364,1.78368817602071,1.64549020602121,1.2178597964584,0.469343416127421,0,0.220528398054962,0,0.968786560175433,0.241251699712623,0.119372344003136,0.492422699235184,0,7.78786268444141,0,0.82554747185289,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,1.67270636811575,1.09181281873089,0.539457385539283,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.66183396182839,0.388902376688095,0,0,0.117357238645754,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.616265742988964,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,50.2629139929189,63.0645574014832,59.0082378842579,66.1634752023197,30.1436308699083,29.4603619981983,42.5264175146038,34.2244114450408,35.345107900768,37.278742446131,0.62272408550506,3.19219898720825,3.58540572083682,4.61902762429759,2.51535795153579,3.67687016900028,3.55594764482584,2.88449080134452,4.1719497246936,3.03236654116557,2.78827229879264,1.88626341386076,2.34103768674706,3.00918216302886,2.81433797882505,1.90517476513229,3.1288768005111,3.47236596834669,2.06042950401653,3.09117732282234,2.40008476669791,3.90446773550542,2.14592570952589,2.76158191601424,1.97629698872194,2.96151127620868,2.19513567447327,2.10455769150274,0.814824683075171,2.80571135828869,2.60997039873183,3.74317033027141,2.45538625901814,2.47898945897546,1.92906610981141,6.99469618226249,2.10538447600868,3.22306581072447,1.53030665655075,0.882365676478062,0.927471342481686 | |||
|short_description=p1@Lrrtm1 | |||
}} |
Latest revision as of 17:59, 1 October 2015
Short description: | p1@Lrrtm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrtm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000020400, ENSMUST00000159616_5end |
EntrezGene: | Lrrtm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.12e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-17 | 23 |
neuron | 9.34e-15 | 33 |
neuronal stem cell | 9.34e-15 | 33 |
neuroblast | 9.34e-15 | 33 |
electrically signaling cell | 9.34e-15 | 33 |
electrically responsive cell | 8.50e-11 | 39 |
electrically active cell | 8.50e-11 | 39 |
ectodermal cell | 5.50e-10 | 44 |
neurectodermal cell | 5.50e-10 | 44 |
neural cell | 1.98e-09 | 43 |