Personal tools

FFCP PHASE1:Mm9::chr11:56825245..56825284,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14799
|EntrezGene=14799
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P23818
|UniProt=P23818
|association_with_transcript=-27bp_to_ENSMUST00000036315_5end
|association_with_transcript=-27bp_to_ENSMUST00000036315_5end
|cluster_id=chr11:56825245..56825284,+
|description=CAGE_peak_2_at_Gria1_5end
|description=CAGE_peak_2_at_Gria1_5end
|id=chr11:56825245..56825284,+
|id=chr11:56825245..56825284,+
|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0000540!2.25e-09!33;CL:0000047!2.25e-09!33;CL:0000031!2.25e-09!33;CL:0000404!2.25e-09!33;CL:0002319!3.05e-09!43;CL:0000221!4.62e-09!44;CL:0000133!4.62e-09!44
|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0000540!2.25e-09!33;CL:0000047!2.25e-09!33;CL:0000031!2.25e-09!33;CL:0000404!2.25e-09!33;CL:0002319!3.05e-09!43;CL:0000221!4.62e-09!44;CL:0000133!4.62e-09!44
|ontology_enrichment_celltype_v019_2=CL:0000117,3.51e-18,23;CL:0000337,3.51e-18,23;CL:0000540,4.00e-10,33;CL:0000047,4.00e-10,33;CL:0000031,4.00e-10,33;CL:0000404,4.00e-10,33;CL:0002319,6.24e-10,43;CL:0000221,1.69e-09,44;CL:0000133,1.69e-09,44;CL:0000393,2.07e-07,39;CL:0000211,2.07e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.70e-26!73;UBERON:0005743!1.70e-26!73;UBERON:0001049!4.17e-26!52;UBERON:0005068!4.17e-26!52;UBERON:0006241!4.17e-26!52;UBERON:0007135!4.17e-26!52;UBERON:0000073!1.15e-25!75;UBERON:0001016!1.15e-25!75;UBERON:0000955!2.42e-25!50;UBERON:0006238!2.42e-25!50;UBERON:0002616!1.63e-24!49;UBERON:0000033!1.39e-22!63;UBERON:0002020!1.81e-21!34;UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0003080!1.67e-20!40;UBERON:0002780!8.81e-20!39;UBERON:0001890!8.81e-20!39;UBERON:0006240!8.81e-20!39;UBERON:0003056!1.24e-19!49;UBERON:0002791!1.51e-18!29;UBERON:0003528!1.51e-18!29;UBERON:0001893!1.51e-18!29;UBERON:0004121!1.35e-17!102;UBERON:0000924!1.35e-17!102;UBERON:0006601!1.35e-17!102;UBERON:0000956!1.53e-13!21;UBERON:0001869!1.53e-13!21;UBERON:0000203!1.53e-13!21;UBERON:0000025!4.38e-13!114;UBERON:0004111!2.60e-12!122;UBERON:0007811!9.76e-12!86;UBERON:0002619!1.17e-11!17;UBERON:0000153!3.60e-10!94;UBERON:0002021!4.37e-08!10;UBERON:0000411!4.37e-08!10;UBERON:0001950!4.37e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.54e-36,54;UBERON:0001049,1.40e-33,52;UBERON:0005068,1.40e-33,52;UBERON:0006241,1.40e-33,52;UBERON:0007135,1.40e-33,52;UBERON:0001017,6.07e-31,73;UBERON:0002020,1.41e-29,34;UBERON:0001016,1.51e-29,75;UBERON:0000955,1.66e-29,47;UBERON:0006238,1.66e-29,47;UBERON:0002616,2.19e-28,46;UBERON:0002346,4.05e-26,64;UBERON:0003075,4.05e-26,64;UBERON:0007284,4.05e-26,64;UBERON:0003528,1.86e-25,29;UBERON:0002791,1.86e-25,29;UBERON:0001893,1.86e-25,29;UBERON:0003080,2.73e-25,40;UBERON:0002780,2.67e-24,39;UBERON:0001890,2.67e-24,39;UBERON:0006240,2.67e-24,39;UBERON:0004121,1.03e-20,95;UBERON:0000924,1.03e-20,95;UBERON:0006601,1.03e-20,95;UBERON:0010371,1.24e-20,73;UBERON:0003056,2.80e-20,49;UBERON:0000956,2.10e-18,21;UBERON:0001869,2.10e-18,21;UBERON:0000203,2.10e-18,21;UBERON:0010314,4.94e-18,92;UBERON:0002619,9.30e-16,17;UBERON:0000025,1.03e-13,114;UBERON:0004111,1.43e-11,122;UBERON:0002021,9.75e-11,10;UBERON:0000411,9.75e-11,10;UBERON:0001950,9.75e-11,10;UBERON:0003076,1.71e-08,12;UBERON:0003057,1.71e-08,12;UBERON:0002420,4.08e-08,8;UBERON:0007245,4.08e-08,8;UBERON:0010009,4.08e-08,8;UBERON:0010011,4.08e-08,8;UBERON:0000454,4.08e-08,8
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,9.43980520676875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,5.27246838562732,7.97162586204562,0.55994568650145,8.62515386189829,0,0,0,0,0,0,5.26022798234954,5.81890077199236,9.50747105259269,0.338844532069132,1.77858959222228,0,0,0,0,1.53687322128622,6.53244557543409,5.53524347159932,2.73422449756797,13.7112472513826,12.1477697523387,5.87955836231779,7.47594673942244,7.35375029288017,23.1243350098716,38.5615761017267,32.1037654505549,10.2871304429551,14.6380229763855,11.4600941522487,16.7509799400829,31.5147061617741,36.977175961988,13.5529149317887,19.362548588678,10.6247684120421,0,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0,0,0,0,0,0,0,0,31.9131068742586,50.0577629284158,0,0,0,0,34.9012189813237,51.2400675156862,19.9790419859454,44.8466746096073,42.4487659168349,30.9604186393745,47.8611726049885,0.101839363850316,0,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0,0.753524089178575,0.816437989815934,1.15302348256365,0.937017245597288,4.9153640440413,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0.828503090142008,0.703578179943289,1.62055855314913,1.89395788468168,1.96764231747404,3.70241070929708,2.55787339225449,1.87791380979733,2.10177616260905,0.658239399653922,0.492502392237286,0.324275238183423,0.146199987425332,0.219550115291051,0.134206418760372,85.7982990141639,26.4464853814761,0,0,0,0.696710015581316,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0.744281895337007,0,0,0.179397413521912,0,2.40179147216586,0.189491411770485,0,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.945810864637146,0.44292937929755,1.59454768657487,5.57135270033509,5.52591941970866,3.47157740595628,0,0,0,0,15.7339578188036,18.1678114217915,3.93443868904021,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0.891194696329576,0,0,0.292255857911312,0,54.3033024752854,0.283880170416537,0.534196811001766,2.28041743095006,1.81467135269789,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,9.53230896110606,0.18006109403131,0.129358683782755,0.643011105094777,0.709360934569094,1.24858172321449,1.31639216481697,1.8267896946876,0,0.21183207086382,0.661585194164886,0,0,0.0603129249281559,0,0,0,15.5757253688828,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.674321731924103,0.743881101528023,0.26175594198403,0.259229946583586,0,0,0,0,0.388902376688095,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.772758376128762,0.563047426353546,1.09890974560359,0.214368379079066,0,25.9785847603851,35.9053684475598,32.0821487526062,26.8090964456153,33.5690434687615,41.5466643564335,43.8764625150674,33.3237690385923,43.9548136714678,32.6188996403647,0.103787347584177,1.59609949360412,1.87806966329548,1.70174701947806,2.09613162627982,1.47074806760011,1.33348036680969,2.26638562962784,3.53011130550997,3.28506375292937,2.28131369901216,2.82939512079114,3.183811253976,2.62503124859964,3.61843454420364,2.85776214769844,3.47652977834566,1.73618298417335,4.53294490883637,1.61918812147837,3.42869252385415,3.54951612318675,2.62279808942053,3.48831399917588,2.82328141245992,4.3153450024755,3.10977553883713,4.20911538300549,3.12349461845482,2.80571135828869,2.25406534435931,2.46261205938909,0.818462086339379,2.47898945897546,1.73615949883027,5.9954538705107,2.57324769289949,3.22306581072447,0.956441660344217,0.882365676478062,0.695603506861264
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,9.43980520676875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,5.27246838562732,7.97162586204562,0.55994568650145,8.62515386189829,0,0,0,0,0,0,5.26022798234954,5.81890077199236,9.50747105259269,0.338844532069132,1.77858959222228,0,0,0,0,1.53687322128622,6.53244557543409,5.53524347159932,2.73422449756797,13.7112472513826,12.1477697523387,5.87955836231779,7.47594673942244,7.35375029288017,23.1243350098716,38.5615761017267,32.1037654505549,10.2871304429551,14.6380229763855,11.4600941522487,16.7509799400829,31.5147061617741,36.977175961988,13.5529149317887,19.362548588678,10.6247684120421,0,0.529000920747499,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.705532242814229,0,0,0,0,0,0,0,0,31.9131068742586,50.0577629284158,0,0,0,0,34.9012189813237,51.2400675156862,19.9790419859454,44.8466746096073,42.4487659168349,30.9604186393745,47.8611726049885,0.101839363850316,0,0.252722758433675,0.631325567659422,0.130120442962704,0.229902104433473,0,0.753524089178575,0.816437989815934,1.15302348256365,0.937017245597288,4.9153640440413,0.215567992932842,0.756424320671277,0.175951124163949,0.43839146485515,0,0,0,0,0,0,0,0.828503090142008,0.703578179943289,1.62055855314913,1.89395788468168,1.96764231747404,3.70241070929708,2.55787339225449,1.87791380979733,2.10177616260905,0.658239399653922,0.492502392237286,0.324275238183423,0.146199987425332,0.219550115291051,0.134206418760372,85.7982990141639,26.4464853814761,0,0,0,0.696710015581316,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0.744281895337007,0,0,0.179397413521912,0,2.40179147216586,0.189491411770485,0,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.585400943573396,0.945810864637146,0.44292937929755,1.59454768657487,5.57135270033509,5.52591941970866,3.47157740595628,0,0,0,0,15.7339578188036,18.1678114217915,3.93443868904021,0,0.631016438832513,0,0.215423397732799,0.238968797952552,0.891194696329576,0,0,0.292255857911312,0,54.3033024752854,0.283880170416537,0.534196811001766,2.28041743095006,1.81467135269789,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,9.53230896110606,0.18006109403131,0.129358683782755,0.643011105094777,0.709360934569094,1.24858172321449,1.31639216481697,1.8267896946876,0,0.21183207086382,0.661585194164886,0,0,0.0603129249281559,0,0,0,15.5757253688828,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.218362563746178,0.674321731924103,0.743881101528023,0.26175594198403,0.259229946583586,0,0,0,0,0.388902376688095,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.772758376128762,0.563047426353546,1.09890974560359,0.214368379079066,0,25.9785847603851,35.9053684475598,32.0821487526062,26.8090964456153,33.5690434687615,41.5466643564335,43.8764625150674,33.3237690385923,43.9548136714678,32.6188996403647,0.103787347584177,1.59609949360412,1.87806966329548,1.70174701947806,2.09613162627982,1.47074806760011,1.33348036680969,2.26638562962784,3.53011130550997,3.28506375292937,2.28131369901216,2.82939512079114,3.183811253976,2.62503124859964,3.61843454420364,2.85776214769844,3.47652977834566,1.73618298417335,4.53294490883637,1.61918812147837,3.42869252385415,3.54951612318675,2.62279808942053,3.48831399917588,2.82328141245992,4.3153450024755,3.10977553883713,4.20911538300549,3.12349461845482,2.80571135828869,2.25406534435931,2.46261205938909,0.818462086339379,2.47898945897546,1.73615949883027,5.9954538705107,2.57324769289949,3.22306581072447,0.956441660344217,0.882365676478062,0.695603506861264
|short_description=p2@Gria1
|short_description=p2@Gria1
}}
}}

Latest revision as of 18:01, 1 October 2015

Short description:p2@Gria1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gria1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -27bp_to_ENSMUST00000036315_5end
EntrezGene:Gria1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gria1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I636.98
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B231.91
cerebellum, neonate N30.CNhs11135.1395-42I250.06
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A434.90
corpus striatum, adult.CNhs10487.19-21D851.24
corpus striatum, neonate N00.CNhs11226.630-43F119.98
cortex, adult.CNhs10473.12-14D544.85
cortex, neonate N30.CNhs11107.1392-42F242.45
diencephalon, adult.CNhs10482.20-12F230.96
diencephalon, neonate N30.CNhs11201.1388-42B247.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E885.80
hippocampus, neonate N00.CNhs11228.627-43G126.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A45.57
lung, neonate N25.CNhs11119.1359-25C75.53
lung, neonate N30.CNhs11133.1394-42H23.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A318.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I954.30
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.58
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A643.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.62
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.51e-1823
neuroblast (sensu Vertebrata)3.51e-1823
neuron4.00e-1033
neuronal stem cell4.00e-1033
neuroblast4.00e-1033
electrically signaling cell4.00e-1033
neural cell6.24e-1043
ectodermal cell1.69e-0944
neurectodermal cell1.69e-0944
electrically responsive cell2.07e-0739
electrically active cell2.07e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.54e-3654
neural tube1.40e-3352
neural rod1.40e-3352
future spinal cord1.40e-3352
neural keel1.40e-3352
central nervous system6.07e-3173
gray matter1.41e-2934
nervous system1.51e-2975
brain1.66e-2947
future brain1.66e-2947
regional part of brain2.19e-2846
neurectoderm4.05e-2664
neural plate4.05e-2664
presumptive neural plate4.05e-2664
brain grey matter1.86e-2529
regional part of telencephalon1.86e-2529
telencephalon1.86e-2529
anterior neural tube2.73e-2540
regional part of forebrain2.67e-2439
forebrain2.67e-2439
future forebrain2.67e-2439
ectoderm-derived structure1.03e-2095
ectoderm1.03e-2095
presumptive ectoderm1.03e-2095
ecto-epithelium1.24e-2073
pre-chordal neural plate2.80e-2049
cerebral cortex2.10e-1821
cerebral hemisphere2.10e-1821
pallium2.10e-1821
structure with developmental contribution from neural crest4.94e-1892
regional part of cerebral cortex9.30e-1617
tube1.03e-13114
anatomical conduit1.43e-11122
occipital lobe9.75e-1110
visual cortex9.75e-1110
neocortex9.75e-1110
posterior neural tube1.71e-0812
chordal neural plate1.71e-0812
basal ganglion4.08e-088
nuclear complex of neuraxis4.08e-088
aggregate regional part of brain4.08e-088
collection of basal ganglia4.08e-088
cerebral subcortex4.08e-088
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:56825245..56825284,%2B&oldid=4315293"