FFCP PHASE1:Mm9::chr5:117690910..117690932,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330177 | |EntrezGene=330177 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V3K3 | |UniProt=Q3V3K3 | ||
|association_with_transcript=-42bp_to_uc008zfk.2_5end | |association_with_transcript=-42bp_to_uc008zfk.2_5end | ||
|cluster_id=chr5:117690910..117690932,+ | |||
|description=CAGE_peak_5_at_Taok3_5end | |description=CAGE_peak_5_at_Taok3_5end | ||
|id=chr5:117690910..117690932,+ | |id=chr5:117690910..117690932,+ | ||
|ontology_enrichment_celltype=CL:0000393!7.60e-13!39;CL:0000211!7.60e-13!39;CL:0000117!1.07e-11!23;CL:0000337!1.07e-11!23;CL:0000055!1.19e-11!50;CL:0000540!1.41e-11!33;CL:0000047!1.41e-11!33;CL:0000031!1.41e-11!33;CL:0000404!1.41e-11!33;CL:0002319!5.16e-11!43;CL:0000221!9.19e-11!44;CL:0000133!9.19e-11!44 | |ontology_enrichment_celltype=CL:0000393!7.60e-13!39;CL:0000211!7.60e-13!39;CL:0000117!1.07e-11!23;CL:0000337!1.07e-11!23;CL:0000055!1.19e-11!50;CL:0000540!1.41e-11!33;CL:0000047!1.41e-11!33;CL:0000031!1.41e-11!33;CL:0000404!1.41e-11!33;CL:0002319!5.16e-11!43;CL:0000221!9.19e-11!44;CL:0000133!9.19e-11!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.87e-18,23;CL:0000337,5.87e-18,23;CL:0000393,1.32e-14,39;CL:0000211,1.32e-14,39;CL:0000540,1.72e-13,33;CL:0000047,1.72e-13,33;CL:0000031,1.72e-13,33;CL:0000404,1.72e-13,33;CL:0002319,1.32e-12,43;CL:0000221,4.03e-12,44;CL:0000133,4.03e-12,44;CL:0002321,1.70e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.78e-30!73;UBERON:0005743!2.78e-30!73;UBERON:0000073!1.17e-29!75;UBERON:0001016!1.17e-29!75;UBERON:0001049!4.37e-26!52;UBERON:0005068!4.37e-26!52;UBERON:0006241!4.37e-26!52;UBERON:0007135!4.37e-26!52;UBERON:0000955!7.19e-26!50;UBERON:0006238!7.19e-26!50;UBERON:0002346!1.89e-25!71;UBERON:0003075!1.89e-25!71;UBERON:0007284!1.89e-25!71;UBERON:0000033!1.96e-25!63;UBERON:0002616!3.41e-25!49;UBERON:0004121!9.45e-25!102;UBERON:0000924!9.45e-25!102;UBERON:0006601!9.45e-25!102;UBERON:0003056!2.17e-20!49;UBERON:0003080!1.34e-19!40;UBERON:0002780!7.45e-19!39;UBERON:0001890!7.45e-19!39;UBERON:0006240!7.45e-19!39;UBERON:0007811!1.29e-18!86;UBERON:0002020!5.72e-17!34;UBERON:0000153!2.68e-16!94;UBERON:0002791!7.47e-15!29;UBERON:0003528!7.47e-15!29;UBERON:0001893!7.47e-15!29;UBERON:0000956!2.34e-10!21;UBERON:0001869!2.34e-10!21;UBERON:0000203!2.34e-10!21;UBERON:0000025!5.51e-09!114;UBERON:0004111!1.05e-08!122;UBERON:0002619!1.76e-08!17;UBERON:0002021!1.77e-07!10;UBERON:0000411!1.77e-07!10;UBERON:0001950!1.77e-07!10;UBERON:0003076!5.14e-07!12;UBERON:0003057!5.14e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!2.78e-30!73;UBERON:0005743!2.78e-30!73;UBERON:0000073!1.17e-29!75;UBERON:0001016!1.17e-29!75;UBERON:0001049!4.37e-26!52;UBERON:0005068!4.37e-26!52;UBERON:0006241!4.37e-26!52;UBERON:0007135!4.37e-26!52;UBERON:0000955!7.19e-26!50;UBERON:0006238!7.19e-26!50;UBERON:0002346!1.89e-25!71;UBERON:0003075!1.89e-25!71;UBERON:0007284!1.89e-25!71;UBERON:0000033!1.96e-25!63;UBERON:0002616!3.41e-25!49;UBERON:0004121!9.45e-25!102;UBERON:0000924!9.45e-25!102;UBERON:0006601!9.45e-25!102;UBERON:0003056!2.17e-20!49;UBERON:0003080!1.34e-19!40;UBERON:0002780!7.45e-19!39;UBERON:0001890!7.45e-19!39;UBERON:0006240!7.45e-19!39;UBERON:0007811!1.29e-18!86;UBERON:0002020!5.72e-17!34;UBERON:0000153!2.68e-16!94;UBERON:0002791!7.47e-15!29;UBERON:0003528!7.47e-15!29;UBERON:0001893!7.47e-15!29;UBERON:0000956!2.34e-10!21;UBERON:0001869!2.34e-10!21;UBERON:0000203!2.34e-10!21;UBERON:0000025!5.51e-09!114;UBERON:0004111!1.05e-08!122;UBERON:0002619!1.76e-08!17;UBERON:0002021!1.77e-07!10;UBERON:0000411!1.77e-07!10;UBERON:0001950!1.77e-07!10;UBERON:0003076!5.14e-07!12;UBERON:0003057!5.14e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.24e-44,54;UBERON:0001017,4.19e-42,73;UBERON:0001049,3.11e-41,52;UBERON:0005068,3.11e-41,52;UBERON:0006241,3.11e-41,52;UBERON:0007135,3.11e-41,52;UBERON:0001016,1.86e-40,75;UBERON:0002346,6.93e-39,64;UBERON:0003075,6.93e-39,64;UBERON:0007284,6.93e-39,64;UBERON:0000955,4.42e-37,47;UBERON:0006238,4.42e-37,47;UBERON:0002616,5.89e-36,46;UBERON:0004121,1.23e-33,95;UBERON:0000924,1.23e-33,95;UBERON:0006601,1.23e-33,95;UBERON:0010371,7.25e-32,73;UBERON:0003080,3.51e-30,40;UBERON:0003056,4.48e-29,49;UBERON:0002780,6.30e-29,39;UBERON:0001890,6.30e-29,39;UBERON:0006240,6.30e-29,39;UBERON:0002020,7.93e-28,34;UBERON:0003528,3.39e-24,29;UBERON:0002791,3.39e-24,29;UBERON:0001893,3.39e-24,29;UBERON:0010314,1.48e-22,92;UBERON:0000956,1.68e-16,21;UBERON:0001869,1.68e-16,21;UBERON:0000203,1.68e-16,21;UBERON:0000025,3.65e-15,114;UBERON:0002619,2.70e-13,17;UBERON:0004111,4.40e-13,122;UBERON:0002021,1.11e-11,10;UBERON:0000411,1.11e-11,10;UBERON:0001950,1.11e-11,10;UBERON:0003076,6.77e-11,12;UBERON:0003057,6.77e-11,12;UBERON:0000119,4.69e-09,176;UBERON:0002420,7.55e-09,8;UBERON:0007245,7.55e-09,8;UBERON:0010009,7.55e-09,8;UBERON:0010011,7.55e-09,8;UBERON:0000454,7.55e-09,8;UBERON:0000483,7.64e-09,174;UBERON:0011216,1.78e-07,194 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,1.21652317463417,2.20256102594018,1.56478268869608,1.52617609466313,0.219686182734472,0.194429899074283,2.09979632438044,2.87505128729943,0,0,0,0.771778308107841,0.286533439938757,1.03134418455488,2.42779753031517,4.23192783417626,0.633831403506179,1.35537812827653,0.889294796111139,0,0,0,0.599200221036809,0,2.07379224616955,1.89008313664367,2.73422449756797,1.42825492201902,3.09215957332259,1.95985278743926,1.91690942036473,2.75765635983006,9.91042928994498,6.89511625660014,8.75557239560588,3.69281605644543,3.7509933876988,2.08365348222704,5.02529398202486,6.19038871034848,5.65353516774197,1.17851434189467,3.70166370077668,2.42319279572891,0.075726193333184,0.68014404096107,0.289864488701678,0,0,0,0,0,0.140444420131752,1.53387290320252,0.259786004602869,0.70667914902068,0.281686839553361,5.13305909657271,5.09610479413291,0,0,0,0,0,0,0.742210695324124,0.346970653532272,0.608930956624282,0,0.301445281105245,0.705532242814229,0.125666591329675,0,0.144599356919912,0,0.970601099684455,0,0.484875253135222,0,5.5628351432194,5.23616767033638,0,0,0,0,10.1857634795279,9.60751265919116,6.53402630986895,8.34356736922927,7.67146371990992,9.3504620051802,7.46309810111685,1.12023300235348,0.373220911830279,0,1.05220927943237,0.260240885925407,0.459804208866946,0.360124259610698,1.20563854268572,1.29269348387523,1.15302348256365,0.937017245597288,1.81092359517311,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0,0.414251545071004,0.703578179943289,0.900310307305074,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.329119699826961,0.32833492815819,0.405344047729279,0.292399974850665,0,0.134206418760372,9.04246778825747,5.14523061896422,0,0.264450566663544,0.639864751605702,0.464473343720877,1.03093969057675,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0,0,0.398282546508734,0.379335801906163,0.456994050438915,0,0.203651327845314,0.581857461502877,0.280543279561274,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0.488894929326078,0.678980343100753,0,0.167506257441816,0.714130922658041,0.195133647857799,1.10344600874334,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,9.31193421929193,5.27452589664914,4.09837363441689,0,0.94652465824877,1.17131623288992,0.646270193198397,0.716906393857656,1.11399337041197,0,1.21443210502468,0.292255857911312,0.790575555893047,5.78378369559253,0.283880170416537,0.890328018336276,0.651547837414304,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,8.5109901438447,0.720244376125241,1.16422815404479,0.643011105094777,1.59606210278046,2.31879462882692,2.13913726782757,2.13125464380219,0.23467170806371,0,0.441056796109924,0.32977250588296,0.161464426695906,0.301564624640779,0.358117032009409,0.328281799490123,0.582961673259701,9.27126510052548,0,0.619160603889667,0,0.941842285023455,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0.836353184057875,0.655087691238533,0.809186078308924,0.578574190077352,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.506868376472335,0.58678619322877,0.781226309063701,0.209718688851422,0.241584120826006,0,0.632022241256357,0,1.54066435747241,0.909445760844565,0.537080087002444,0.993406773906324,0.600977247599844,0.147689527174577,0.807731599585181,0.228620419965,0.201652370273681,0.194915761479505,0.384847366561318,0.116876902181569,0,0,0,0,0.772758376128762,0.375364950902364,0.183151624267265,0,0.501572104035363,2.82375921308533,6.44455331110048,4.01026859407578,5.15559547031063,8.22099023724771,10.5755145634558,8.10027000278167,11.2580300806055,4.07828168085784,10.3552062350364,0.415149390336707,0,1.70733605754134,1.70174701947806,1.04806581313991,0.551530525350042,1.55572709461131,1.44224540067226,0.64183841918363,0.252697211763798,0.760437899670719,1.69763707247469,0.655490552289177,0.704276676453562,1.09127391015665,0.476293691283074,0.927074607558844,0.77163688185482,0,1.03039244094078,1.02860775715625,0.354951612318675,0.476872379894642,0.726732083161643,0.752875043322645,0.676916863133412,0.73171189149109,0.789209134313529,0.679020569229309,1.68342681497322,0.711810108745045,0.788035859004508,0.409231043169689,1.39443157067369,0.385813221962283,2.24829520144151,0.233931608445408,1.50409737833809,0.956441660344217,0.441182838239031,0.695603506861264 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,1.21652317463417,2.20256102594018,1.56478268869608,1.52617609466313,0.219686182734472,0.194429899074283,2.09979632438044,2.87505128729943,0,0,0,0.771778308107841,0.286533439938757,1.03134418455488,2.42779753031517,4.23192783417626,0.633831403506179,1.35537812827653,0.889294796111139,0,0,0,0.599200221036809,0,2.07379224616955,1.89008313664367,2.73422449756797,1.42825492201902,3.09215957332259,1.95985278743926,1.91690942036473,2.75765635983006,9.91042928994498,6.89511625660014,8.75557239560588,3.69281605644543,3.7509933876988,2.08365348222704,5.02529398202486,6.19038871034848,5.65353516774197,1.17851434189467,3.70166370077668,2.42319279572891,0.075726193333184,0.68014404096107,0.289864488701678,0,0,0,0,0,0.140444420131752,1.53387290320252,0.259786004602869,0.70667914902068,0.281686839553361,5.13305909657271,5.09610479413291,0,0,0,0,0,0,0.742210695324124,0.346970653532272,0.608930956624282,0,0.301445281105245,0.705532242814229,0.125666591329675,0,0.144599356919912,0,0.970601099684455,0,0.484875253135222,0,5.5628351432194,5.23616767033638,0,0,0,0,10.1857634795279,9.60751265919116,6.53402630986895,8.34356736922927,7.67146371990992,9.3504620051802,7.46309810111685,1.12023300235348,0.373220911830279,0,1.05220927943237,0.260240885925407,0.459804208866946,0.360124259610698,1.20563854268572,1.29269348387523,1.15302348256365,0.937017245597288,1.81092359517311,0,0,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0,0.414251545071004,0.703578179943289,0.900310307305074,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.536546802799238,0.116765342367169,0.329119699826961,0.32833492815819,0.405344047729279,0.292399974850665,0,0.134206418760372,9.04246778825747,5.14523061896422,0,0.264450566663544,0.639864751605702,0.464473343720877,1.03093969057675,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0,0,0.398282546508734,0.379335801906163,0.456994050438915,0,0.203651327845314,0.581857461502877,0.280543279561274,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0.488894929326078,0.678980343100753,0,0.167506257441816,0.714130922658041,0.195133647857799,1.10344600874334,0.221464689648775,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,9.31193421929193,5.27452589664914,4.09837363441689,0,0.94652465824877,1.17131623288992,0.646270193198397,0.716906393857656,1.11399337041197,0,1.21443210502468,0.292255857911312,0.790575555893047,5.78378369559253,0.283880170416537,0.890328018336276,0.651547837414304,0.824850614862677,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,8.5109901438447,0.720244376125241,1.16422815404479,0.643011105094777,1.59606210278046,2.31879462882692,2.13913726782757,2.13125464380219,0.23467170806371,0,0.441056796109924,0.32977250588296,0.161464426695906,0.301564624640779,0.358117032009409,0.328281799490123,0.582961673259701,9.27126510052548,0,0.619160603889667,0,0.941842285023455,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.324016022465404,0.836353184057875,0.655087691238533,0.809186078308924,0.578574190077352,0.26175594198403,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0.506868376472335,0.58678619322877,0.781226309063701,0.209718688851422,0.241584120826006,0,0.632022241256357,0,1.54066435747241,0.909445760844565,0.537080087002444,0.993406773906324,0.600977247599844,0.147689527174577,0.807731599585181,0.228620419965,0.201652370273681,0.194915761479505,0.384847366561318,0.116876902181569,0,0,0,0,0.772758376128762,0.375364950902364,0.183151624267265,0,0.501572104035363,2.82375921308533,6.44455331110048,4.01026859407578,5.15559547031063,8.22099023724771,10.5755145634558,8.10027000278167,11.2580300806055,4.07828168085784,10.3552062350364,0.415149390336707,0,1.70733605754134,1.70174701947806,1.04806581313991,0.551530525350042,1.55572709461131,1.44224540067226,0.64183841918363,0.252697211763798,0.760437899670719,1.69763707247469,0.655490552289177,0.704276676453562,1.09127391015665,0.476293691283074,0.927074607558844,0.77163688185482,0,1.03039244094078,1.02860775715625,0.354951612318675,0.476872379894642,0.726732083161643,0.752875043322645,0.676916863133412,0.73171189149109,0.789209134313529,0.679020569229309,1.68342681497322,0.711810108745045,0.788035859004508,0.409231043169689,1.39443157067369,0.385813221962283,2.24829520144151,0.233931608445408,1.50409737833809,0.956441660344217,0.441182838239031,0.695603506861264 | ||
|short_description=p5@Taok3 | |short_description=p5@Taok3 | ||
}} | }} |
Latest revision as of 18:11, 1 October 2015
Short description: | p5@Taok3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Taok3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -42bp_to_uc008zfk.2_5end |
EntrezGene: | Taok3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.87e-18 | 23 |
neuroblast (sensu Vertebrata) | 5.87e-18 | 23 |
electrically responsive cell | 1.32e-14 | 39 |
electrically active cell | 1.32e-14 | 39 |
neuron | 1.72e-13 | 33 |
neuronal stem cell | 1.72e-13 | 33 |
neuroblast | 1.72e-13 | 33 |
electrically signaling cell | 1.72e-13 | 33 |
neural cell | 1.32e-12 | 43 |
ectodermal cell | 4.03e-12 | 44 |
neurectodermal cell | 4.03e-12 | 44 |
embryonic cell | 1.70e-08 | 70 |