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FFCP PHASE1:Mm9::chr13:54867914..54867933,-: Difference between revisions

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(Created page with "{{FFCP |id=chr13:54867914..54867933,- |short_description=p1@Sncb |description=CAGE_peak_1_at_Sncb_5end |association_with_transcript=22bp_to_ENSMUST00000036825_5end |Entre...")
 
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{{FFCP
{{FFCP
|id=chr13:54867914..54867933,-
|DHSsupport=NA
|short_description=p1@Sncb
|DPIdataset=NA
|description=CAGE_peak_1_at_Sncb_5end
|association_with_transcript=22bp_to_ENSMUST00000036825_5end
|EntrezGene=104069
|EntrezGene=104069
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q91ZZ3
|UniProt=Q91ZZ3
|association_with_transcript=22bp_to_ENSMUST00000036825_5end
|cluster_id=chr13:54867914..54867933,-
|description=CAGE_peak_1_at_Sncb_5end
|id=chr13:54867914..54867933,-
|ontology_enrichment_celltype=CL:0000221!5.34e-14!44;CL:0000133!5.34e-14!44;CL:0002319!8.66e-14!43;CL:0000117!2.73e-13!23;CL:0000337!2.73e-13!23;CL:0000540!1.71e-12!33;CL:0000047!1.71e-12!33;CL:0000031!1.71e-12!33;CL:0000404!1.71e-12!33;CL:0000055!2.31e-09!50;CL:0000393!2.37e-08!39;CL:0000211!2.37e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.09e-16,23;CL:0000337,3.09e-16,23;CL:0000221,1.20e-13,44;CL:0000133,1.20e-13,44;CL:0000540,1.24e-13,33;CL:0000047,1.24e-13,33;CL:0000031,1.24e-13,33;CL:0000404,1.24e-13,33;CL:0002319,2.20e-13,43;CL:0000393,6.05e-10,39;CL:0000211,6.05e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.37e-30!75;UBERON:0001016!1.37e-30!75;UBERON:0001017!2.51e-30!73;UBERON:0005743!2.51e-30!73;UBERON:0002346!2.52e-27!71;UBERON:0003075!2.52e-27!71;UBERON:0007284!2.52e-27!71;UBERON:0004121!2.90e-27!102;UBERON:0000924!2.90e-27!102;UBERON:0006601!2.90e-27!102;UBERON:0001049!1.35e-24!52;UBERON:0005068!1.35e-24!52;UBERON:0006241!1.35e-24!52;UBERON:0007135!1.35e-24!52;UBERON:0000955!2.41e-23!50;UBERON:0006238!2.41e-23!50;UBERON:0000033!3.05e-23!63;UBERON:0002616!1.04e-22!49;UBERON:0002020!6.77e-20!34;UBERON:0003056!6.04e-19!49;UBERON:0003080!9.45e-18!40;UBERON:0002780!4.97e-17!39;UBERON:0001890!4.97e-17!39;UBERON:0006240!4.97e-17!39;UBERON:0002791!1.07e-16!29;UBERON:0003528!1.07e-16!29;UBERON:0001893!1.07e-16!29;UBERON:0007811!1.31e-13!86;UBERON:0000956!3.48e-12!21;UBERON:0001869!3.48e-12!21;UBERON:0000203!3.48e-12!21;UBERON:0000153!6.60e-11!94;UBERON:0002619!1.07e-10!17;UBERON:0002021!7.80e-09!10;UBERON:0000411!7.80e-09!10;UBERON:0001950!7.80e-09!10;UBERON:0003076!1.86e-07!12;UBERON:0003057!1.86e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.78e-32,73;UBERON:0001016,8.71e-32,75;UBERON:0000073,1.20e-28,54;UBERON:0002346,1.96e-28,64;UBERON:0003075,1.96e-28,64;UBERON:0007284,1.96e-28,64;UBERON:0004121,4.49e-27,95;UBERON:0000924,4.49e-27,95;UBERON:0006601,4.49e-27,95;UBERON:0001049,8.06e-27,52;UBERON:0005068,8.06e-27,52;UBERON:0006241,8.06e-27,52;UBERON:0007135,8.06e-27,52;UBERON:0010371,5.17e-24,73;UBERON:0002020,1.13e-22,34;UBERON:0000955,1.18e-22,47;UBERON:0006238,1.18e-22,47;UBERON:0002616,6.64e-22,46;UBERON:0003056,3.41e-19,49;UBERON:0003528,1.03e-18,29;UBERON:0002791,1.03e-18,29;UBERON:0001893,1.03e-18,29;UBERON:0003080,1.71e-18,40;UBERON:0010314,7.58e-18,92;UBERON:0002780,1.24e-17,39;UBERON:0001890,1.24e-17,39;UBERON:0006240,1.24e-17,39;UBERON:0000956,4.01e-13,21;UBERON:0001869,4.01e-13,21;UBERON:0000203,4.01e-13,21;UBERON:0002619,3.15e-11,17;UBERON:0002021,1.16e-10,10;UBERON:0000411,1.16e-10,10;UBERON:0001950,1.16e-10,10;UBERON:0003076,6.09e-09,12;UBERON:0003057,6.09e-09,12;UBERON:0002420,8.07e-07,8;UBERON:0007245,8.07e-07,8;UBERON:0010009,8.07e-07,8;UBERON:0010011,8.07e-07,8;UBERON:0000454,8.07e-07,8
|phase1_expression=2.24208385946712,0,0,0,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5713420693745,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,1.09012578190223,0.878744730937887,0.388859798148567,1.53985063787899,38.8131923785423,0,0,0,0,0,0,44.5096213891115,76.1747010151727,64.6508031576303,0,0.889294796111139,0.449949858640699,1.97773272513395,0,3.89480143673926,4.99483796918021,12.0279950277834,18.0907957364465,10.9368979902719,381.344064179078,309.657694414162,24.3756690437759,20.8943126819755,38.6071890376209,425.04730065764,421.751277695375,406.596493529276,40.3572040454393,56.9968019643012,36.4639359389732,332.506951810645,289.822744166315,290.77506551927,326.743101290297,293.57040580775,100.842100191488,0.832988126665025,2.72057616384428,0,0,0,1.07940638327563,0,0,16.0106638950197,0,0,0,4.78867627240714,0,0,0,0,0,0,10.7332846935916,0,1.92974780784272,0.693941307064543,2.43572382649713,2.07553947530453,1.3565037649736,1.29347577849275,0.502666365318702,0,0.578397427679647,0,0,0.220841518460394,0,0,279.898441943039,225.364656531278,0,0,0,0,497.155132184607,287.767879172916,69.1098936620754,513.303217527792,489.439385330253,411.420328227929,313.125637720772,0,0,0,49.6642779892079,0,0.229902104433473,0.540186389416048,5.42537344208574,9.59314638033723,16.6547836370305,17.9907311154679,122.625397730293,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,332.678698628449,48.2622632058844,0,0,0,0,0.257734922644187,0.605050573870028,0.667134131534611,0.760902504450237,0,0,0.251335208800269,0.596869416123452,0.58489226135736,0,0.216138049874694,0.398282546508734,0.379335801906163,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0.518054945597687,0.144649058581512,0,0,0,0,427.706771727478,379.179806125777,0,0,5.04813151066011,2.73307121007647,5.17016154558717,0.238968797952552,1.78238939265915,0.283076530788832,0,0.876767573733936,3.16230222357219,266.375371313678,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,1.18120757152309,0.614870295887855,0.516856586336442,1.09060118843252,0.356497378384721,1.26414703174326,1.05418608574999,0,9.53230896110606,0.36012218806262,0,0.214337035031592,0.709360934569094,2.49716344642899,5.59466670047211,6.39376393140658,0,0,1.54369878638473,0,0.322928853391811,0.120625849856312,0,0,0.291480836629851,411.458745161321,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,1.04544148007234,0.655087691238533,0.539457385539283,1.07449492442937,1.04702376793612,0.648074866458964,0,3.94585057078933,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,4.71867049915699,4.34851417486811,2.30424005006292,1.26404448251271,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0.292373642219257,0.0962118416403295,0.233753804363138,0,0,0.0897138566094757,0.335769232728157,0.965947970160952,0,0,0.428736758158132,0,740.389665670974,661.027039624306,670.287750724094,382.201477532361,635.071495827385,689.674628316797,622.370745213725,665.574738365398,604.491973584929,728.488758634811,0.415149390336707,0.399024873401031,2.04880326904961,7.53630822911712,11.947950269795,22.0612210140017,17.335244768526,15.8646994073949,18.9342333659171,16.172621552883,21.0387818908899,19.0512604799937,15.91905626988,15.6221371867881,14.9906573974151,21.4332161077383,17.9620705214526,15.6256468575601,11.9504911232959,21.0494455792188,14.057639347802,14.198064492747,13.1139904471027,15.6974129962915,15.7162665293602,13.8767956942349,18.47572526015,20.2563677807139,14.5310401815072,23.567975409625,19.4561429723646,17.2382844157236,15.5507796404482,15.3387472774106,10.9956768259251,41.468555937699,17.778802241851,15.6855869455258,12.6250299165437,11.9119366324538,13.9120701372253
|phase1_expression=2.24208385946712,0,0,0,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,61.5713420693745,0,0,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,1.09012578190223,0.878744730937887,0.388859798148567,1.53985063787899,38.8131923785423,0,0,0,0,0,0,44.5096213891115,76.1747010151727,64.6508031576303,0,0.889294796111139,0.449949858640699,1.97773272513395,0,3.89480143673926,4.99483796918021,12.0279950277834,18.0907957364465,10.9368979902719,381.344064179078,309.657694414162,24.3756690437759,20.8943126819755,38.6071890376209,425.04730065764,421.751277695375,406.596493529276,40.3572040454393,56.9968019643012,36.4639359389732,332.506951810645,289.822744166315,290.77506551927,326.743101290297,293.57040580775,100.842100191488,0.832988126665025,2.72057616384428,0,0,0,1.07940638327563,0,0,16.0106638950197,0,0,0,4.78867627240714,0,0,0,0,0,0,10.7332846935916,0,1.92974780784272,0.693941307064543,2.43572382649713,2.07553947530453,1.3565037649736,1.29347577849275,0.502666365318702,0,0.578397427679647,0,0,0.220841518460394,0,0,279.898441943039,225.364656531278,0,0,0,0,497.155132184607,287.767879172916,69.1098936620754,513.303217527792,489.439385330253,411.420328227929,313.125637720772,0,0,0,49.6642779892079,0,0.229902104433473,0.540186389416048,5.42537344208574,9.59314638033723,16.6547836370305,17.9907311154679,122.625397730293,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,332.678698628449,48.2622632058844,0,0,0,0,0.257734922644187,0.605050573870028,0.667134131534611,0.760902504450237,0,0,0.251335208800269,0.596869416123452,0.58489226135736,0,0.216138049874694,0.398282546508734,0.379335801906163,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0.518054945597687,0.144649058581512,0,0,0,0,427.706771727478,379.179806125777,0,0,5.04813151066011,2.73307121007647,5.17016154558717,0.238968797952552,1.78238939265915,0.283076530788832,0,0.876767573733936,3.16230222357219,266.375371313678,0.141940085208269,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,1.18120757152309,0.614870295887855,0.516856586336442,1.09060118843252,0.356497378384721,1.26414703174326,1.05418608574999,0,9.53230896110606,0.36012218806262,0,0.214337035031592,0.709360934569094,2.49716344642899,5.59466670047211,6.39376393140658,0,0,1.54369878638473,0,0.322928853391811,0.120625849856312,0,0,0.291480836629851,411.458745161321,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,1.04544148007234,0.655087691238533,0.539457385539283,1.07449492442937,1.04702376793612,0.648074866458964,0,3.94585057078933,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,4.71867049915699,4.34851417486811,2.30424005006292,1.26404448251271,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0.292373642219257,0.0962118416403295,0.233753804363138,0,0,0.0897138566094757,0.335769232728157,0.965947970160952,0,0,0.428736758158132,0,740.389665670974,661.027039624306,670.287750724094,382.201477532361,635.071495827385,689.674628316797,622.370745213725,665.574738365398,604.491973584929,728.488758634811,0.415149390336707,0.399024873401031,2.04880326904961,7.53630822911712,11.947950269795,22.0612210140017,17.335244768526,15.8646994073949,18.9342333659171,16.172621552883,21.0387818908899,19.0512604799937,15.91905626988,15.6221371867881,14.9906573974151,21.4332161077383,17.9620705214526,15.6256468575601,11.9504911232959,21.0494455792188,14.057639347802,14.198064492747,13.1139904471027,15.6974129962915,15.7162665293602,13.8767956942349,18.47572526015,20.2563677807139,14.5310401815072,23.567975409625,19.4561429723646,17.2382844157236,15.5507796404482,15.3387472774106,10.9956768259251,41.468555937699,17.778802241851,15.6855869455258,12.6250299165437,11.9119366324538,13.9120701372253
|short_description=p1@Sncb
}}
}}

Latest revision as of 18:23, 1 October 2015

Short description:p1@Sncb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sncb_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 22bp_to_ENSMUST00000036825_5end
EntrezGene:Sncb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sncb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A361.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C344.51
Mouse Granule cells, donor2.CNhs12357.11731-123E376.17
Mouse Granule cells, donor3.CNhs12108.11636-122C764.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.09
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1381.34
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5309.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D638.61
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3425.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3421.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7406.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F457.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4332.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5289.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6290.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6326.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6293.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1100.84
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.73
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2279.90
cerebellum, neonate N30.CNhs11135.1395-42I2225.36
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4497.16
corpus striatum, adult.CNhs10487.19-21D8287.77
corpus striatum, neonate N00.CNhs11226.630-43F169.11
cortex, adult.CNhs10473.12-14D5513.30
cortex, neonate N30.CNhs11107.1392-42F2489.44
diencephalon, adult.CNhs10482.20-12F2411.42
diencephalon, neonate N30.CNhs11201.1388-42B2313.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G449.66
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C69.59
eyeball, neonate N01.CNhs11140.1532-43E716.65
eyeball, neonate N02.CNhs11205.1551-44G817.99
eyeball, neonate N16.CNhs11188.777-19A2122.63
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8332.68
hippocampus, neonate N00.CNhs11228.627-43G148.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2427.71
medulla oblongata, neonate N30.CNhs11200.1396-42A3379.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I9266.38
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C9411.46
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D94.72
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1740.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2661.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3670.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7382.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4635.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5689.67
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6622.37
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7665.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8604.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9728.49
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B111.95
whole body, embryo E16.CNhs10514.453-14F222.06
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.05
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.34
whole body, embryo E17.5.CNhs10513.490-9F911.00
whole body, embryo E17.CNhs10517.475-3I541.47
whole body, embryo E18.CNhs10516.493-3B317.78
whole body, neonate N00.CNhs10525.657-19C215.69
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B413.91





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.09e-1623
neuroblast (sensu Vertebrata)3.09e-1623
ectodermal cell1.20e-1344
neurectodermal cell1.20e-1344
neuron1.24e-1333
neuronal stem cell1.24e-1333
neuroblast1.24e-1333
electrically signaling cell1.24e-1333
neural cell2.20e-1343
electrically responsive cell6.05e-1039
electrically active cell6.05e-1039

Uber anatomy
Ontology termp-valuen
central nervous system2.78e-3273
nervous system8.71e-3275
regional part of nervous system1.20e-2854
neurectoderm1.96e-2864
neural plate1.96e-2864
presumptive neural plate1.96e-2864
ectoderm-derived structure4.49e-2795
ectoderm4.49e-2795
presumptive ectoderm4.49e-2795
neural tube8.06e-2752
neural rod8.06e-2752
future spinal cord8.06e-2752
neural keel8.06e-2752
ecto-epithelium5.17e-2473
gray matter1.13e-2234
brain1.18e-2247
future brain1.18e-2247
regional part of brain6.64e-2246
pre-chordal neural plate3.41e-1949
brain grey matter1.03e-1829
regional part of telencephalon1.03e-1829
telencephalon1.03e-1829
anterior neural tube1.71e-1840
structure with developmental contribution from neural crest7.58e-1892
regional part of forebrain1.24e-1739
forebrain1.24e-1739
future forebrain1.24e-1739
cerebral cortex4.01e-1321
cerebral hemisphere4.01e-1321
pallium4.01e-1321
regional part of cerebral cortex3.15e-1117
occipital lobe1.16e-1010
visual cortex1.16e-1010
neocortex1.16e-1010
posterior neural tube6.09e-0912
chordal neural plate6.09e-0912
basal ganglion8.07e-078
nuclear complex of neuraxis8.07e-078
aggregate regional part of brain8.07e-078
collection of basal ganglia8.07e-078
cerebral subcortex8.07e-078
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