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FFCP PHASE1:Mm9::chrX:33735963..33735988,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:33735963..33735988,+
|DHSsupport=NA
|short_description=p1@Zcchc12
|DPIdataset=NA
|description=CAGE_peak_1_at_Zcchc12_5end
|association_with_transcript=0bp_to_ENSMUST00000115256_5end
|EntrezGene=72693
|EntrezGene=72693
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=Q9CZA5
|UniProt=Q9CZA5
|association_with_transcript=0bp_to_ENSMUST00000115256_5end
|cluster_id=chrX:33735963..33735988,+
|description=CAGE_peak_1_at_Zcchc12_5end
|id=chrX:33735963..33735988,+
|ontology_enrichment_celltype=CL:0000117!5.66e-14!23;CL:0000337!5.66e-14!23;CL:0000540!4.64e-13!33;CL:0000047!4.64e-13!33;CL:0000031!4.64e-13!33;CL:0000404!4.64e-13!33;CL:0000221!3.90e-10!44;CL:0000133!3.90e-10!44;CL:0002319!4.75e-10!43;CL:0000393!3.35e-08!39;CL:0000211!3.35e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.12e-15,23;CL:0000337,2.12e-15,23;CL:0000540,1.32e-14,33;CL:0000047,1.32e-14,33;CL:0000031,1.32e-14,33;CL:0000404,1.32e-14,33;CL:0000221,6.23e-11,44;CL:0000133,6.23e-11,44;CL:0002319,7.77e-11,43;CL:0000393,4.10e-10,39;CL:0000211,4.10e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.61e-24!73;UBERON:0005743!1.61e-24!73;UBERON:0000073!1.42e-23!75;UBERON:0001016!1.42e-23!75;UBERON:0002346!1.37e-22!71;UBERON:0003075!1.37e-22!71;UBERON:0007284!1.37e-22!71;UBERON:0001049!1.13e-20!52;UBERON:0005068!1.13e-20!52;UBERON:0006241!1.13e-20!52;UBERON:0007135!1.13e-20!52;UBERON:0004121!2.36e-19!102;UBERON:0000924!2.36e-19!102;UBERON:0006601!2.36e-19!102;UBERON:0000955!3.75e-19!50;UBERON:0006238!3.75e-19!50;UBERON:0002616!1.47e-18!49;UBERON:0000033!4.85e-18!63;UBERON:0003056!2.72e-17!49;UBERON:0003080!7.74e-17!40;UBERON:0002780!3.84e-16!39;UBERON:0001890!3.84e-16!39;UBERON:0006240!3.84e-16!39;UBERON:0002020!1.17e-15!34;UBERON:0007811!2.23e-13!86;UBERON:0000153!5.00e-13!94;UBERON:0002791!1.95e-12!29;UBERON:0003528!1.95e-12!29;UBERON:0001893!1.95e-12!29;UBERON:0000956!2.28e-07!21;UBERON:0001869!2.28e-07!21;UBERON:0000203!2.28e-07!21;UBERON:0002420!7.48e-07!8;UBERON:0007245!7.48e-07!8;UBERON:0010009!7.48e-07!8;UBERON:0010011!7.48e-07!8;UBERON:0000454!7.48e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.78e-27,73;UBERON:0001016,7.20e-26,75;UBERON:0000073,1.51e-24,54;UBERON:0002346,3.23e-24,64;UBERON:0003075,3.23e-24,64;UBERON:0007284,3.23e-24,64;UBERON:0001049,4.12e-23,52;UBERON:0005068,4.12e-23,52;UBERON:0006241,4.12e-23,52;UBERON:0007135,4.12e-23,52;UBERON:0004121,1.59e-20,95;UBERON:0000924,1.59e-20,95;UBERON:0006601,1.59e-20,95;UBERON:0000955,2.33e-19,47;UBERON:0006238,2.33e-19,47;UBERON:0010371,3.95e-19,73;UBERON:0003056,7.72e-19,49;UBERON:0002616,1.04e-18,46;UBERON:0003080,1.35e-18,40;UBERON:0002780,8.08e-18,39;UBERON:0001890,8.08e-18,39;UBERON:0006240,8.08e-18,39;UBERON:0002020,2.80e-17,34;UBERON:0010314,9.93e-16,92;UBERON:0003528,1.10e-13,29;UBERON:0002791,1.10e-13,29;UBERON:0001893,1.10e-13,29;UBERON:0000956,4.87e-08,21;UBERON:0001869,4.87e-08,21;UBERON:0000203,4.87e-08,21;UBERON:0002420,1.83e-07,8;UBERON:0007245,1.83e-07,8;UBERON:0010009,1.83e-07,8;UBERON:0010011,1.83e-07,8;UBERON:0000454,1.83e-07,8;UBERON:0002619,3.22e-07,17
|phase1_expression=1.44133962394315,0,0,0,0,0.16787927191189,1.40167584357315,1.16210991097419,4.78681655315667,6.08567768437183,0,0.0797721589953364,1.19840510951844,0.34968160967599,0,0,0,0,0.137114433605739,0,5.78294373027274,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.31811709640683,1.1665793944457,0.419959264876088,0,0,1.45072428402269,0,0,0,0,60.8972547187389,108.972141730039,79.2289254382724,0.677689064138264,0,0,0,0,3.29560121570245,6.91592949578798,1.76272340924412,4.72520784160917,3.78584930432488,73.6979539761813,74.6535668416454,25.8455586343553,24.344749638632,41.3648453974509,36.3382407297983,40.9876355253453,43.3170423782607,90.7377659583734,112.163851056554,71.3651317662761,53.6031358082651,114.803572446463,94.123720630515,58.0418313383125,66.2028315715829,48.6502553604034,0.454357159999104,0.151143120213571,0,0,0,0,0,0,2.24711072210803,0,0,0,2.67602497575693,0,0,0,0,0.506719730950197,0,1.25602267690966,0,1.48442139064825,3.29622120855658,5.48037860961854,2.53677046981664,5.87818298155228,6.82014501387088,0.376999773989026,0,0.289198713839823,0,0,0,0,1.86391761218122,1.17112318804619,3.77004072264219,0.255457055208591,0,0,0,85.6802457395586,48.4950638987744,99.8952099297272,24.509229147111,15.0872119824895,83.7385819575027,67.0056416469839,0.81471491080253,0.124406970610093,0,0.210441855886474,5.72529949035896,3.21862946206862,4.32149111532838,3.61691562805716,2.78949646520444,3.07472928683639,3.74806898238915,2.58703370739016,1.72454394346274,3.59301552318857,2.81521798662318,1.97276159184817,1.39023624612799,1.0447564995665,0.61734640922383,1.59227413454795,0,0,0,2.69263504296152,1.64168241986767,2.16074473753218,0.946978942340841,1.96764231747404,0.925602677324269,0.930135779001631,0.536546802799238,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,14.5100064509248,23.4622516224768,0,0.793351699990633,3.62590025909898,1.39342003116263,4.89696353023955,3.83198696784351,5.78182913996663,2.66315876557583,0,5.27036655116835,3.01602250560323,2.98434708061726,2.14460495831032,0.898819408654221,0.216138049874694,0.796565093017469,2.46568271239006,1.48523066392647,0,1.22190796707189,0.581857461502877,1.19230893813542,1.07502113111237,0.738050739898011,0,0.123397163921801,0,1.33476084572875,0.786235980452812,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,2.4633883530163,0.488894929326078,0.509235257325564,0.234690248288502,0.837531287209079,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,37.2477368771677,44.423229218445,0,0,4.10160685241134,2.73307121007647,5.60100834105277,0,2.45078541490634,1.41538265394416,3.64329631507405,4.38383786866968,5.53402889125133,29.8828824272281,1.13552068166615,0.890328018336276,0.651547837414304,0.494910368917606,0,0.971122544619926,0.906970670894253,0.188605079755898,0.295301892880773,2.45948118355142,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,55.8320953436212,5.58189391497062,4.52755393239641,2.35770738534752,5.85222771019503,4.45922044005176,9.70839221552514,26.7929155220847,0,0,1.7642271844397,0,0.161464426695906,0.180938774784468,0,0.164140899745061,1.1659233465194,30.4097495297236,0,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,1.90934123603023,2.53068794864908,3.65975040828328,3.56417624711944,2.29997125615916,3.49380101993884,2.96701562046606,3.88471241909079,1.30877970992015,0.90730481304255,0,1.12738587736838,3.13984746692355,3.30916980914195,1.36115831840833,0.774958940866387,0.337912250981556,0.117357238645754,0.911430693907651,1.67774951081137,2.17425708743405,0.864090018773596,2.8441000856536,0.810900861160657,0.410843828659309,0.129920822977795,0.895133478337407,0.79472541912506,0.841368146639782,1.32920574457119,1.00966449948148,0.457240839929999,1.20991422164209,2.33898913775406,1.53938946624527,2.57129184799452,0,0.221985953374065,0.0897138566094757,0.503653849092235,1.54551675225752,0.187682475451182,0,0,0,10.7302850097243,9.20650473014354,10.8850147553485,6.8741272937475,4.11049511862385,5.2877572817279,10.8003600037089,10.3573876741571,7.70342095273148,8.80192529978094,1.764384908931,2.39414924040619,8.70741389346084,8.0225216632537,11.528723944539,8.45680138870065,9.77885602327107,11.743998262617,8.98573786857083,8.59170519996911,9.88569269571935,13.3924702384114,9.08322622457859,8.83547103187196,9.87890066036548,14.2888107384922,10.5454736609819,10.0312794641127,14.4230065281157,20.4606498986812,7.88599280486455,11.8908790126756,12.1602456873134,8.57543858130738,12.3283288344083,10.1537529470012,11.5244622909847,12.6273461490165,7.74083448921412,18.5176949647054,11.8635018124174,7.97886307242064,18.0061658994663,7.7468420592983,7.52335782826451,20.7342779688495,9.59119594626174,8.59484216193193,4.78220830172108,2.42650561031467,2.08681052058379
|phase1_expression=1.44133962394315,0,0,0,0,0.16787927191189,1.40167584357315,1.16210991097419,4.78681655315667,6.08567768437183,0,0.0797721589953364,1.19840510951844,0.34968160967599,0,0,0,0,0.137114433605739,0,5.78294373027274,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.31811709640683,1.1665793944457,0.419959264876088,0,0,1.45072428402269,0,0,0,0,60.8972547187389,108.972141730039,79.2289254382724,0.677689064138264,0,0,0,0,3.29560121570245,6.91592949578798,1.76272340924412,4.72520784160917,3.78584930432488,73.6979539761813,74.6535668416454,25.8455586343553,24.344749638632,41.3648453974509,36.3382407297983,40.9876355253453,43.3170423782607,90.7377659583734,112.163851056554,71.3651317662761,53.6031358082651,114.803572446463,94.123720630515,58.0418313383125,66.2028315715829,48.6502553604034,0.454357159999104,0.151143120213571,0,0,0,0,0,0,2.24711072210803,0,0,0,2.67602497575693,0,0,0,0,0.506719730950197,0,1.25602267690966,0,1.48442139064825,3.29622120855658,5.48037860961854,2.53677046981664,5.87818298155228,6.82014501387088,0.376999773989026,0,0.289198713839823,0,0,0,0,1.86391761218122,1.17112318804619,3.77004072264219,0.255457055208591,0,0,0,85.6802457395586,48.4950638987744,99.8952099297272,24.509229147111,15.0872119824895,83.7385819575027,67.0056416469839,0.81471491080253,0.124406970610093,0,0.210441855886474,5.72529949035896,3.21862946206862,4.32149111532838,3.61691562805716,2.78949646520444,3.07472928683639,3.74806898238915,2.58703370739016,1.72454394346274,3.59301552318857,2.81521798662318,1.97276159184817,1.39023624612799,1.0447564995665,0.61734640922383,1.59227413454795,0,0,0,2.69263504296152,1.64168241986767,2.16074473753218,0.946978942340841,1.96764231747404,0.925602677324269,0.930135779001631,0.536546802799238,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0.134206418760372,14.5100064509248,23.4622516224768,0,0.793351699990633,3.62590025909898,1.39342003116263,4.89696353023955,3.83198696784351,5.78182913996663,2.66315876557583,0,5.27036655116835,3.01602250560323,2.98434708061726,2.14460495831032,0.898819408654221,0.216138049874694,0.796565093017469,2.46568271239006,1.48523066392647,0,1.22190796707189,0.581857461502877,1.19230893813542,1.07502113111237,0.738050739898011,0,0.123397163921801,0,1.33476084572875,0.786235980452812,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,2.4633883530163,0.488894929326078,0.509235257325564,0.234690248288502,0.837531287209079,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,37.2477368771677,44.423229218445,0,0,4.10160685241134,2.73307121007647,5.60100834105277,0,2.45078541490634,1.41538265394416,3.64329631507405,4.38383786866968,5.53402889125133,29.8828824272281,1.13552068166615,0.890328018336276,0.651547837414304,0.494910368917606,0,0.971122544619926,0.906970670894253,0.188605079755898,0.295301892880773,2.45948118355142,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,55.8320953436212,5.58189391497062,4.52755393239641,2.35770738534752,5.85222771019503,4.45922044005176,9.70839221552514,26.7929155220847,0,0,1.7642271844397,0,0.161464426695906,0.180938774784468,0,0.164140899745061,1.1659233465194,30.4097495297236,0,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,1.90934123603023,2.53068794864908,3.65975040828328,3.56417624711944,2.29997125615916,3.49380101993884,2.96701562046606,3.88471241909079,1.30877970992015,0.90730481304255,0,1.12738587736838,3.13984746692355,3.30916980914195,1.36115831840833,0.774958940866387,0.337912250981556,0.117357238645754,0.911430693907651,1.67774951081137,2.17425708743405,0.864090018773596,2.8441000856536,0.810900861160657,0.410843828659309,0.129920822977795,0.895133478337407,0.79472541912506,0.841368146639782,1.32920574457119,1.00966449948148,0.457240839929999,1.20991422164209,2.33898913775406,1.53938946624527,2.57129184799452,0,0.221985953374065,0.0897138566094757,0.503653849092235,1.54551675225752,0.187682475451182,0,0,0,10.7302850097243,9.20650473014354,10.8850147553485,6.8741272937475,4.11049511862385,5.2877572817279,10.8003600037089,10.3573876741571,7.70342095273148,8.80192529978094,1.764384908931,2.39414924040619,8.70741389346084,8.0225216632537,11.528723944539,8.45680138870065,9.77885602327107,11.743998262617,8.98573786857083,8.59170519996911,9.88569269571935,13.3924702384114,9.08322622457859,8.83547103187196,9.87890066036548,14.2888107384922,10.5454736609819,10.0312794641127,14.4230065281157,20.4606498986812,7.88599280486455,11.8908790126756,12.1602456873134,8.57543858130738,12.3283288344083,10.1537529470012,11.5244622909847,12.6273461490165,7.74083448921412,18.5176949647054,11.8635018124174,7.97886307242064,18.0061658994663,7.7468420592983,7.52335782826451,20.7342779688495,9.59119594626174,8.59484216193193,4.78220830172108,2.42650561031467,2.08681052058379
|short_description=p1@Zcchc12
}}
}}

Latest revision as of 19:55, 1 October 2015

Short description:p1@Zcchc12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zcchc12_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: 0bp_to_ENSMUST00000115256_5end
EntrezGene:Zcchc12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zcchc12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C360.90
Mouse Granule cells, donor2.CNhs12357.11731-123E3108.97
Mouse Granule cells, donor3.CNhs12108.11636-122C779.23
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F173.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D574.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.85
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D641.36
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.99
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.32
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D490.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4112.16
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D871.37
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E453.60
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5114.80
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I694.12
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D658.04
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F666.20
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E148.65
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F55.88
adrenal gland, neonate N00.CNhs11191.1311-23C16.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A485.68
corpus striatum, adult.CNhs10487.19-21D848.50
corpus striatum, neonate N00.CNhs11226.630-43F199.90
cortex, adult.CNhs10473.12-14D524.51
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F283.74
diencephalon, neonate N30.CNhs11201.1388-42B267.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E814.51
hippocampus, neonate N00.CNhs11228.627-43G123.46
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C237.25
medulla oblongata, neonate N30.CNhs11200.1396-42A344.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I929.88
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G855.83
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F59.71
pituitary gland, neonate N00.CNhs11190.1308-22E926.79
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C930.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D43.56
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B82.97
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B111.53
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I520.73
whole body, embryo E18.CNhs10516.493-3B39.59
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.12e-1523
neuroblast (sensu Vertebrata)2.12e-1523
neuron1.32e-1433
neuronal stem cell1.32e-1433
neuroblast1.32e-1433
electrically signaling cell1.32e-1433
ectodermal cell6.23e-1144
neurectodermal cell6.23e-1144
neural cell7.77e-1143
electrically responsive cell4.10e-1039
electrically active cell4.10e-1039

Uber anatomy
Ontology termp-valuen
central nervous system1.78e-2773
nervous system7.20e-2675
regional part of nervous system1.51e-2454
neurectoderm3.23e-2464
neural plate3.23e-2464
presumptive neural plate3.23e-2464
neural tube4.12e-2352
neural rod4.12e-2352
future spinal cord4.12e-2352
neural keel4.12e-2352
ectoderm-derived structure1.59e-2095
ectoderm1.59e-2095
presumptive ectoderm1.59e-2095
brain2.33e-1947
future brain2.33e-1947
ecto-epithelium3.95e-1973
pre-chordal neural plate7.72e-1949
regional part of brain1.04e-1846
anterior neural tube1.35e-1840
regional part of forebrain8.08e-1839
forebrain8.08e-1839
future forebrain8.08e-1839
gray matter2.80e-1734
structure with developmental contribution from neural crest9.93e-1692
brain grey matter1.10e-1329
regional part of telencephalon1.10e-1329
telencephalon1.10e-1329
cerebral cortex4.87e-0821
cerebral hemisphere4.87e-0821
pallium4.87e-0821
basal ganglion1.83e-078
nuclear complex of neuraxis1.83e-078
aggregate regional part of brain1.83e-078
collection of basal ganglia1.83e-078
cerebral subcortex1.83e-078
regional part of cerebral cortex3.22e-0717
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