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FFCP PHASE1:Mm9::chr3:152645151..152645180,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:152645151..152645180,-
|DHSsupport=NA
|short_description=p1@St6galnac5
|DPIdataset=NA
|description=CAGE_peak_1_at_St6galnac5_5end
|association_with_transcript=0bp_to_NM_012028,uc008rtu.1_5end
|EntrezGene=26938
|EntrezGene=26938
|HGNC=
|HGNC=
|MCL_coexpression_id=708
|TSSclassifier=NA
|UniProt=Q6GTI0,Q9QYJ1
|UniProt=Q6GTI0,Q9QYJ1
|association_with_transcript=0bp_to_NM_012028,uc008rtu.1_5end
|cluster_id=chr3:152645151..152645180,-
|description=CAGE_peak_1_at_St6galnac5_5end
|id=chr3:152645151..152645180,-
|ontology_enrichment_celltype=CL:0000117!1.02e-13!23;CL:0000337!1.02e-13!23;CL:0000540!1.26e-11!33;CL:0000047!1.26e-11!33;CL:0000031!1.26e-11!33;CL:0000404!1.26e-11!33;CL:0002319!2.31e-08!43;CL:0000221!4.50e-08!44;CL:0000133!4.50e-08!44;CL:0000393!3.09e-07!39;CL:0000211!3.09e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-15,23;CL:0000337,2.00e-15,23;CL:0000540,4.22e-11,33;CL:0000047,4.22e-11,33;CL:0000031,4.22e-11,33;CL:0000404,4.22e-11,33;CL:0002319,1.26e-07,43;CL:0000393,1.37e-07,39;CL:0000211,1.37e-07,39;CL:0000221,3.44e-07,44;CL:0000133,3.44e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.23e-23!102;UBERON:0000924!2.23e-23!102;UBERON:0006601!2.23e-23!102;UBERON:0002346!1.15e-22!71;UBERON:0003075!1.15e-22!71;UBERON:0007284!1.15e-22!71;UBERON:0001017!3.34e-22!73;UBERON:0005743!3.34e-22!73;UBERON:0000073!2.80e-21!75;UBERON:0001016!2.80e-21!75;UBERON:0001049!1.00e-20!52;UBERON:0005068!1.00e-20!52;UBERON:0006241!1.00e-20!52;UBERON:0007135!1.00e-20!52;UBERON:0000033!2.83e-20!63;UBERON:0000955!5.21e-20!50;UBERON:0006238!5.21e-20!50;UBERON:0002020!1.65e-19!34;UBERON:0002616!2.09e-19!49;UBERON:0003056!4.00e-18!49;UBERON:0003080!2.05e-17!40;UBERON:0002780!5.69e-17!39;UBERON:0001890!5.69e-17!39;UBERON:0006240!5.69e-17!39;UBERON:0002791!9.82e-17!29;UBERON:0003528!9.82e-17!29;UBERON:0001893!9.82e-17!29;UBERON:0000956!7.22e-12!21;UBERON:0001869!7.22e-12!21;UBERON:0000203!7.22e-12!21;UBERON:0002619!3.71e-10!17;UBERON:0000153!3.29e-09!94;UBERON:0007811!9.56e-09!86;UBERON:0002021!5.77e-08!10;UBERON:0000411!5.77e-08!10;UBERON:0001950!5.77e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-24,54;UBERON:0002346,8.83e-24,64;UBERON:0003075,8.83e-24,64;UBERON:0007284,8.83e-24,64;UBERON:0010371,5.24e-23,73;UBERON:0001049,8.96e-23,52;UBERON:0005068,8.96e-23,52;UBERON:0006241,8.96e-23,52;UBERON:0007135,8.96e-23,52;UBERON:0001017,2.64e-22,73;UBERON:0002020,4.91e-22,34;UBERON:0001016,5.84e-21,75;UBERON:0004121,6.86e-20,95;UBERON:0000924,6.86e-20,95;UBERON:0006601,6.86e-20,95;UBERON:0000955,7.15e-20,47;UBERON:0006238,7.15e-20,47;UBERON:0002616,3.32e-19,46;UBERON:0003056,4.89e-19,49;UBERON:0003528,7.22e-19,29;UBERON:0002791,7.22e-19,29;UBERON:0001893,7.22e-19,29;UBERON:0003080,1.01e-18,40;UBERON:0002780,3.20e-18,39;UBERON:0001890,3.20e-18,39;UBERON:0006240,3.20e-18,39;UBERON:0010314,8.86e-15,92;UBERON:0000956,2.58e-13,21;UBERON:0001869,2.58e-13,21;UBERON:0000203,2.58e-13,21;UBERON:0002619,2.30e-11,17;UBERON:0002021,7.22e-09,10;UBERON:0000411,7.22e-09,10;UBERON:0001950,7.22e-09,10;UBERON:0002420,8.97e-07,8;UBERON:0007245,8.97e-07,8;UBERON:0010009,8.97e-07,8;UBERON:0010011,8.97e-07,8;UBERON:0000454,8.97e-07,8
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33424243480484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.09843091367236,1.1665793944457,0.139986421625363,1.43752564364972,0,0,0,0,0,0,35.6076971112892,48.667170093027,40.5652098243955,0,0.889294796111139,0,0,0,0,0.384218305321555,5.49554945234932,9.85543349821342,4.41682418837902,11.4260393761521,14.7981922437581,18.618601480673,18.4981759065196,14.7075005857603,31.9336054898227,34.6032686210859,29.03163478543,39.8296588945185,45.8353094448072,37.5057626800867,13.959149950069,14.6318278608237,37.7411672008721,22.9810296669461,15.0913981647049,21.063137378259,0.075726193333184,0.377857800533928,0,0,0,0,0,0,1.96622188184453,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,1.59857431606684,1.29468941823586,0.445326417194474,1.56136794089522,5.1759131313064,2.53677046981664,6.33035090321015,5.29149182110672,0.251333182659351,0.247194967734374,3.47038456607788,0.884610551949874,0,0.220841518460394,0.484875253135222,0,2.34224637609238,2.72280718857492,0.255457055208591,0.11981512450592,0,0,6.74057877321702,31.5675415944852,37.1936882254079,48.8446339740297,34.7773021969249,31.5837827730531,37.9644555578553,0.611036183101898,0.497627882440372,0,0.841767423545896,1.30120442962704,1.60931473103431,2.70093194708024,4.37043971723574,2.38127747029647,2.3060469651273,2.81105173679186,4.13925393182425,0.215567992932842,2.45837904218165,1.40760899331159,1.31517439456545,2.22437799380478,2.089512999133,1.4404749548556,0.59710280045548,0,0.257347907114715,0,2.48550927042602,1.87620847984877,1.2604344302271,0.946978942340841,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,167.811378954174,88.292157421426,0,0,0.639864751605702,0.464473343720877,0.77320476793256,0.403367049246685,0.444756087689741,0.380451252225118,0,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,1.51734320762465,2.62771579002376,1.1270773567308,1.01825663922657,0.775809948670503,2.80543279561274,0.758838445491087,3.39503340353085,1.56998727841375,2.59134044235781,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.66277871149944,1.51593129416388,1.62964976442026,1.18821560042632,1.87752198630802,2.01007508930179,7.14130922658041,9.36641509717434,1.57635144106191,3.5434350343804,2.39182152986231,1.47476983244164,0.518054945597687,2.02508682014116,0,0,0.491764273019036,1.37968373152366,6.74312477948726,7.14991288212439,0,0,2.2085575359138,2.34263246577983,2.15423397732799,0.955875191810208,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,0.395287777946524,31.1681676929153,0.709700426041343,0.178065603667255,0.977321756121456,0.494910368917606,0,1.69946445308487,1.51161778482376,1.88605079755898,0.885905678642318,1.22974059177571,2.32585463851399,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,1.98067203434441,1.16422815404479,0.857348140126369,1.41872186913819,2.85390108163313,4.11372551505302,2.13125464380219,0,0,0,8.244312647074,7.42736362801165,0.72375509913787,1.55184047204077,1.31312719796049,0.291480836629851,4.63563255026274,1.19609616558497,9.08102219038179,9.4449208958553,1.13021074202815,1.0935538217682,1.14389086603261,1.35982743995084,1.25956307091292,1.24379976423981,1.90934123603023,1.26534397432454,2.43983360552218,1.83609079397062,1.67270636811575,0.655087691238533,0.674321731924103,0.41326727862668,0.523511883968059,0.648074866458964,0.621339313086926,0,0.299033092087958,0.496375471371293,0,0.258319646955462,0.506868376472335,0.352071715937262,0,0,0,0,0,0.608175645870493,0.616265742988964,0.389762468933385,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.906921534460845,0.443971906748129,0,0,1.15913756419314,0.375364950902364,4.02933573387983,0.428736758158132,0,62.1227026878773,47.4134993602392,48.6961186423487,52.4152206148247,31.5137959094495,43.8128460486026,34.4261475118221,40.5289082901798,38.5171047636574,39.8675440048901,2.17953429926771,4.78829848081237,3.75613932659095,3.8897074730927,3.5634237646757,5.33146174505041,4.00044110042907,5.35691148821125,5.13470735346904,6.57012750585873,5.83002389747551,6.03604292435444,6.08669798554236,6.53056554529667,4.65227298540468,6.19181798667996,4.63537303779422,3.8581844092741,4.12085900803307,4.26876868389752,7.54312355247914,3.72699192934609,6.67621331852499,7.99405291477807,5.8347815857505,4.73841804193388,6.40247905054704,6.05060336307039,6.24698923690964,5.05028044491965,4.98267076121531,4.13718825977367,2.86461730218783,5.26785260032284,6.36591816237767,8.49355964989016,5.6143586026898,9.02458427002853,2.48674831689496,1.32354851471709,1.39120701372253
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.33424243480484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.09843091367236,1.1665793944457,0.139986421625363,1.43752564364972,0,0,0,0,0,0,35.6076971112892,48.667170093027,40.5652098243955,0,0.889294796111139,0,0,0,0,0.384218305321555,5.49554945234932,9.85543349821342,4.41682418837902,11.4260393761521,14.7981922437581,18.618601480673,18.4981759065196,14.7075005857603,31.9336054898227,34.6032686210859,29.03163478543,39.8296588945185,45.8353094448072,37.5057626800867,13.959149950069,14.6318278608237,37.7411672008721,22.9810296669461,15.0913981647049,21.063137378259,0.075726193333184,0.377857800533928,0,0,0,0,0,0,1.96622188184453,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,1.59857431606684,1.29468941823586,0.445326417194474,1.56136794089522,5.1759131313064,2.53677046981664,6.33035090321015,5.29149182110672,0.251333182659351,0.247194967734374,3.47038456607788,0.884610551949874,0,0.220841518460394,0.484875253135222,0,2.34224637609238,2.72280718857492,0.255457055208591,0.11981512450592,0,0,6.74057877321702,31.5675415944852,37.1936882254079,48.8446339740297,34.7773021969249,31.5837827730531,37.9644555578553,0.611036183101898,0.497627882440372,0,0.841767423545896,1.30120442962704,1.60931473103431,2.70093194708024,4.37043971723574,2.38127747029647,2.3060469651273,2.81105173679186,4.13925393182425,0.215567992932842,2.45837904218165,1.40760899331159,1.31517439456545,2.22437799380478,2.089512999133,1.4404749548556,0.59710280045548,0,0.257347907114715,0,2.48550927042602,1.87620847984877,1.2604344302271,0.946978942340841,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0,167.811378954174,88.292157421426,0,0,0.639864751605702,0.464473343720877,0.77320476793256,0.403367049246685,0.444756087689741,0.380451252225118,0,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,1.51734320762465,2.62771579002376,1.1270773567308,1.01825663922657,0.775809948670503,2.80543279561274,0.758838445491087,3.39503340353085,1.56998727841375,2.59134044235781,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.66277871149944,1.51593129416388,1.62964976442026,1.18821560042632,1.87752198630802,2.01007508930179,7.14130922658041,9.36641509717434,1.57635144106191,3.5434350343804,2.39182152986231,1.47476983244164,0.518054945597687,2.02508682014116,0,0,0.491764273019036,1.37968373152366,6.74312477948726,7.14991288212439,0,0,2.2085575359138,2.34263246577983,2.15423397732799,0.955875191810208,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,0.395287777946524,31.1681676929153,0.709700426041343,0.178065603667255,0.977321756121456,0.494910368917606,0,1.69946445308487,1.51161778482376,1.88605079755898,0.885905678642318,1.22974059177571,2.32585463851399,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,1.98067203434441,1.16422815404479,0.857348140126369,1.41872186913819,2.85390108163313,4.11372551505302,2.13125464380219,0,0,0,8.244312647074,7.42736362801165,0.72375509913787,1.55184047204077,1.31312719796049,0.291480836629851,4.63563255026274,1.19609616558497,9.08102219038179,9.4449208958553,1.13021074202815,1.0935538217682,1.14389086603261,1.35982743995084,1.25956307091292,1.24379976423981,1.90934123603023,1.26534397432454,2.43983360552218,1.83609079397062,1.67270636811575,0.655087691238533,0.674321731924103,0.41326727862668,0.523511883968059,0.648074866458964,0.621339313086926,0,0.299033092087958,0.496375471371293,0,0.258319646955462,0.506868376472335,0.352071715937262,0,0,0,0,0,0.608175645870493,0.616265742988964,0.389762468933385,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.906921534460845,0.443971906748129,0,0,1.15913756419314,0.375364950902364,4.02933573387983,0.428736758158132,0,62.1227026878773,47.4134993602392,48.6961186423487,52.4152206148247,31.5137959094495,43.8128460486026,34.4261475118221,40.5289082901798,38.5171047636574,39.8675440048901,2.17953429926771,4.78829848081237,3.75613932659095,3.8897074730927,3.5634237646757,5.33146174505041,4.00044110042907,5.35691148821125,5.13470735346904,6.57012750585873,5.83002389747551,6.03604292435444,6.08669798554236,6.53056554529667,4.65227298540468,6.19181798667996,4.63537303779422,3.8581844092741,4.12085900803307,4.26876868389752,7.54312355247914,3.72699192934609,6.67621331852499,7.99405291477807,5.8347815857505,4.73841804193388,6.40247905054704,6.05060336307039,6.24698923690964,5.05028044491965,4.98267076121531,4.13718825977367,2.86461730218783,5.26785260032284,6.36591816237767,8.49355964989016,5.6143586026898,9.02458427002853,2.48674831689496,1.32354851471709,1.39120701372253
|short_description=p1@St6galnac5
}}
}}

Latest revision as of 19:59, 1 October 2015

Short description:p1@St6galnac5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_St6galnac5_5end
Coexpression cluster:MCL_coexpression_mm9:708
Association with transcript: 0bp_to_NM_012028, uc008rtu.1_5end
EntrezGene:St6galnac5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@St6galnac5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C335.61
Mouse Granule cells, donor2.CNhs12357.11731-123E348.67
Mouse Granule cells, donor3.CNhs12108.11636-122C740.57
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.03
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D837.51
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.98
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.06
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C15.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D831.57
corpus striatum, neonate N00.CNhs11226.630-43F137.19
cortex, adult.CNhs10473.12-14D548.84
cortex, neonate N30.CNhs11107.1392-42F234.78
diencephalon, adult.CNhs10482.20-12F231.58
diencephalon, neonate N30.CNhs11201.1388-42B237.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8167.81
hippocampus, neonate N00.CNhs11228.627-43G188.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G72.81
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A37.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I931.17
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C38.24
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A162.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A247.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A348.70
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D752.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A431.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A634.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.53
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.87
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C29.02
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.00e-1523
neuroblast (sensu Vertebrata)2.00e-1523
neuron4.22e-1133
neuronal stem cell4.22e-1133
neuroblast4.22e-1133
electrically signaling cell4.22e-1133
neural cell1.26e-0743
electrically responsive cell1.37e-0739
electrically active cell1.37e-0739
ectodermal cell3.44e-0744
neurectodermal cell3.44e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.48e-2454
neurectoderm8.83e-2464
neural plate8.83e-2464
presumptive neural plate8.83e-2464
ecto-epithelium5.24e-2373
neural tube8.96e-2352
neural rod8.96e-2352
future spinal cord8.96e-2352
neural keel8.96e-2352
central nervous system2.64e-2273
gray matter4.91e-2234
nervous system5.84e-2175
ectoderm-derived structure6.86e-2095
ectoderm6.86e-2095
presumptive ectoderm6.86e-2095
brain7.15e-2047
future brain7.15e-2047
regional part of brain3.32e-1946
pre-chordal neural plate4.89e-1949
brain grey matter7.22e-1929
regional part of telencephalon7.22e-1929
telencephalon7.22e-1929
anterior neural tube1.01e-1840
regional part of forebrain3.20e-1839
forebrain3.20e-1839
future forebrain3.20e-1839
structure with developmental contribution from neural crest8.86e-1592
cerebral cortex2.58e-1321
cerebral hemisphere2.58e-1321
pallium2.58e-1321
regional part of cerebral cortex2.30e-1117
occipital lobe7.22e-0910
visual cortex7.22e-0910
neocortex7.22e-0910
basal ganglion8.97e-078
nuclear complex of neuraxis8.97e-078
aggregate regional part of brain8.97e-078
collection of basal ganglia8.97e-078
cerebral subcortex8.97e-078
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