FFCP PHASE1:Mm9::chr3:156225105..156225160,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320840 | |EntrezGene=320840 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z4T6 | |UniProt=D3Z4T6 | ||
|association_with_transcript=172bp_to_ENSMUST00000106065_5end | |association_with_transcript=172bp_to_ENSMUST00000106065_5end | ||
|cluster_id=chr3:156225105..156225160,+ | |||
|description=CAGE_peak_2_at_Negr1_5end | |description=CAGE_peak_2_at_Negr1_5end | ||
|id=chr3:156225105..156225160,+ | |id=chr3:156225105..156225160,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.37e-13!23;CL:0000337!1.37e-13!23;CL:0000540!1.01e-12!33;CL:0000047!1.01e-12!33;CL:0000031!1.01e-12!33;CL:0000404!1.01e-12!33;CL:0000393!1.46e-10!39;CL:0000211!1.46e-10!39;CL:0000221!9.76e-08!44;CL:0000133!9.76e-08!44;CL:0002319!1.75e-07!43 | |ontology_enrichment_celltype=CL:0000117!1.37e-13!23;CL:0000337!1.37e-13!23;CL:0000540!1.01e-12!33;CL:0000047!1.01e-12!33;CL:0000031!1.01e-12!33;CL:0000404!1.01e-12!33;CL:0000393!1.46e-10!39;CL:0000211!1.46e-10!39;CL:0000221!9.76e-08!44;CL:0000133!9.76e-08!44;CL:0002319!1.75e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.04e-18,23;CL:0000337,7.04e-18,23;CL:0000540,2.14e-11,33;CL:0000047,2.14e-11,33;CL:0000031,2.14e-11,33;CL:0000404,2.14e-11,33;CL:0000393,1.17e-09,39;CL:0000211,1.17e-09,39;CL:0000221,4.30e-07,44;CL:0000133,4.30e-07,44;CL:0002319,8.70e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.08e-23!73;UBERON:0005743!3.08e-23!73;UBERON:0000073!1.92e-22!75;UBERON:0001016!1.92e-22!75;UBERON:0001049!1.45e-21!52;UBERON:0005068!1.45e-21!52;UBERON:0006241!1.45e-21!52;UBERON:0007135!1.45e-21!52;UBERON:0004121!1.91e-20!102;UBERON:0000924!1.91e-20!102;UBERON:0006601!1.91e-20!102;UBERON:0000033!2.13e-20!63;UBERON:0002346!2.26e-20!71;UBERON:0003075!2.26e-20!71;UBERON:0007284!2.26e-20!71;UBERON:0000955!2.58e-20!50;UBERON:0006238!2.58e-20!50;UBERON:0002616!1.30e-19!49;UBERON:0002020!5.46e-19!34;UBERON:0003056!8.54e-18!49;UBERON:0003080!2.57e-17!40;UBERON:0002780!1.03e-16!39;UBERON:0001890!1.03e-16!39;UBERON:0006240!1.03e-16!39;UBERON:0002791!8.56e-16!29;UBERON:0003528!8.56e-16!29;UBERON:0001893!8.56e-16!29;UBERON:0000956!2.67e-11!21;UBERON:0001869!2.67e-11!21;UBERON:0000203!2.67e-11!21;UBERON:0000153!1.22e-09!94;UBERON:0002619!2.13e-09!17;UBERON:0007811!4.51e-09!86;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10;UBERON:0000025!3.48e-07!114;UBERON:0000468!7.02e-07!333;UBERON:0004111!8.66e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.89e-32,54;UBERON:0001049,4.78e-30,52;UBERON:0005068,4.78e-30,52;UBERON:0006241,4.78e-30,52;UBERON:0007135,4.78e-30,52;UBERON:0001017,3.76e-27,73;UBERON:0002346,2.26e-26,64;UBERON:0003075,2.26e-26,64;UBERON:0007284,2.26e-26,64;UBERON:0001016,7.62e-26,75;UBERON:0000955,7.79e-26,47;UBERON:0006238,7.79e-26,47;UBERON:0002020,2.73e-25,34;UBERON:0002616,6.96e-25,46;UBERON:0003080,2.01e-23,40;UBERON:0010371,1.33e-22,73;UBERON:0002780,1.34e-22,39;UBERON:0001890,1.34e-22,39;UBERON:0006240,1.34e-22,39;UBERON:0003056,6.25e-22,49;UBERON:0004121,5.78e-21,95;UBERON:0000924,5.78e-21,95;UBERON:0006601,5.78e-21,95;UBERON:0003528,6.04e-21,29;UBERON:0002791,6.04e-21,29;UBERON:0001893,6.04e-21,29;UBERON:0000956,7.71e-15,21;UBERON:0001869,7.71e-15,21;UBERON:0000203,7.71e-15,21;UBERON:0010314,1.45e-14,92;UBERON:0002619,2.93e-12,17;UBERON:0002021,3.34e-11,10;UBERON:0000411,3.34e-11,10;UBERON:0001950,3.34e-11,10;UBERON:0000025,5.06e-08,114;UBERON:0004111,2.44e-07,122;UBERON:0002420,2.80e-07,8;UBERON:0007245,2.80e-07,8;UBERON:0010009,2.80e-07,8;UBERON:0010011,2.80e-07,8;UBERON:0000454,2.80e-07,8;UBERON:0003076,4.89e-07,12;UBERON:0003057,4.89e-07,12 | |||
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|phase1_expression=1.76163731815273,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5072943780067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.31790010585369,0.550640256485045,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,13.5552028775931,12.1667925232568,10.775133859605,0,0,0,0,0,0.299600110518405,0,4.66603255388149,3.51015439662396,4.83747411108179,10.8547374073445,12.1477697523387,6.36952155917761,5.55903731905771,6.43453150627015,12.1127469099328,10.9811110753261,9.98442466165583,9.75958529203434,11.0700048758916,10.4182674111352,6.42120897703176,7.31591393041184,9.77908785771585,21.5078867395777,20.3591503542717,12.1159639786445,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,0,0,0,0,1.1418387971906,0.776813650941515,0.593768556259299,0.693941307064543,0.608930956624282,0.230615497256059,0,0.23517741427141,0.125666591329675,0,2.02439099687876,0,0.161766849947409,0.220841518460394,0,0,26.6430525280508,20.7352239745321,0.255457055208591,0,0,0,11.5338792341713,19.2150253183823,15.4554853098823,38.9366477230699,43.4716277461562,9.97382613885888,15.8996437806402,0.305518091550949,0.248813941220186,0,1.47309299120532,0.910843100738926,0,0.720248519221397,0.753524089178575,1.97305847538851,2.69038812598185,1.49922759295566,4.65666067330228,0,0.567318240503458,2.28736461413134,0.657587197282725,1.66828349535359,1.0447564995665,0.823128545631774,0.995171334092466,0,0,0,0.828503090142008,1.40715635988658,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0.492502392237286,0.324275238183423,0,0.219550115291051,0.402619256281115,20.3981250107203,19.9634948015812,0,0,0.639864751605702,1.62565670302307,1.15980715189884,0.403367049246685,0.667134131534611,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0.38992817423824,0.898819408654221,0,0,0.758671603812327,2.62771579002376,0,1.62921062276251,1.93952487167626,0.771494018793504,1.96033265085198,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,1.79261474086228,1.52770577197669,1.40814148973101,0.670025029767263,0.952174563544055,0,0.945810864637146,0.44292937929755,1.2756381492599,0.327726629431476,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,7.86697890940181,6.21221938938677,0.163934945376675,0,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,0.891194696329576,1.13230612315533,0.809621403349789,0.584511715822624,0.790575555893047,29.8828824272281,1.13552068166615,0.35613120733451,0.977321756121456,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,1.62054984628179,0,1.07168517515796,1.77340233642274,1.60531935841864,1.15184314421485,1.2178597964584,0,0,0,0.65954501176592,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0.632671987162271,1.62655573701479,0.540026704109006,0,0.436725127492355,0.269728692769641,1.1571483801547,0,0.388844919875379,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0.352071715937262,0.13020438484395,0.314578033277133,0.241584120826006,0,0.316011120628178,0.405450430580328,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0.428736758158132,0,65.5112137435797,50.6357760157895,61.2998199380154,50.6966887913878,56.8618491409633,44.5682399459923,61.4270475210943,44.1314779159736,45.3142408984205,45.0451471224083,0.207574695168353,1.59609949360412,2.39027048055788,2.43106717068294,1.67690530102386,1.83843508450014,5.33392146723877,2.88449080134452,4.1719497246936,3.28506375292937,3.04175159868288,2.82939512079114,2.71560371662659,4.48176066834085,4.25022470271538,3.33405583898152,4.05595140806994,4.24400285020151,2.06042950401653,3.97437084362873,5.82877729055206,4.61437096014278,3.33810665926249,6.24989591519013,4.42314087952054,3.38458431566706,3.10977553883713,3.6829759601298,2.71608227691724,2.80571135828869,3.55905054372522,2.1670986122624,4.09231043169689,2.63392630016142,1.92906610981141,4.24677982494508,2.57324769289949,2.57845264857958,1.14772999241306,1.10295709559758,0.927471342481686 | ||
|short_description=p2@Negr1 | |short_description=p2@Negr1 | ||
}} | }} |
Latest revision as of 20:25, 1 October 2015
Short description: | p2@Negr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Negr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 172bp_to_ENSMUST00000106065_5end |
EntrezGene: | Negr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.04e-18 | 23 |
neuroblast (sensu Vertebrata) | 7.04e-18 | 23 |
neuron | 2.14e-11 | 33 |
neuronal stem cell | 2.14e-11 | 33 |
neuroblast | 2.14e-11 | 33 |
electrically signaling cell | 2.14e-11 | 33 |
electrically responsive cell | 1.17e-09 | 39 |
electrically active cell | 1.17e-09 | 39 |
ectodermal cell | 4.30e-07 | 44 |
neurectodermal cell | 4.30e-07 | 44 |
neural cell | 8.70e-07 | 43 |