FFCP PHASE1:Mm9::chr11:62094926..62094936,+: Difference between revisions
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{{FFCP|EntrezGene=72795|HGNC=|MCL_coexpression_id=1|UniProt=Q8CC21,Q9D857|association_with_transcript=-38bp_to_ENSMUST00000136477,NM_028360,NM_029704,uc007jiq.2,uc007jir.2,uc007jis.2_5end|description=CAGE_peak_4_at_Ttc19_5end|id=chr11:62094926..62094936,+|ontology_enrichment_celltype=CL:0000117!8.75e-07!23;CL:0000337!8.75e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.95e-09,23;CL:0000337,3.95e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.77e-13!73;UBERON:0005743!2.77e-13!73;UBERON:0001049!4.83e-13!52;UBERON:0005068!4.83e-13!52;UBERON:0006241!4.83e-13!52;UBERON:0007135!4.83e-13!52;UBERON:0000073!1.14e-12!75;UBERON:0001016!1.14e-12!75;UBERON:0000033!1.29e-12!63;UBERON:0000955!2.07e-12!50;UBERON:0006238!2.07e-12!50;UBERON:0002346!5.55e-12!71;UBERON:0003075!5.55e-12!71;UBERON:0007284!5.55e-12!71;UBERON:0002616!7.35e-12!49;UBERON:0002020!1.44e-11!34;UBERON:0004121!1.88e-11!102;UBERON:0000924!1.88e-11!102;UBERON:0006601!1.88e-11!102;UBERON:0003056!9.83e-10!49;UBERON:0002791!2.12e-09!29;UBERON:0003528!2.12e-09!29;UBERON:0001893!2.12e-09!29;UBERON:0003080!2.52e-09!40;UBERON:0002780!9.27e-09!39;UBERON:0001890!9.27e-09!39;UBERON:0006240!9.27e-09!39;UBERON:0002021!2.93e-07!10;UBERON:0000411!2.93e-07!10;UBERON:0001950!2.93e-07!10;UBERON:0000025!9.46e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-25,54;UBERON:0001049,2.63e-23,52;UBERON:0005068,2.63e-23,52;UBERON:0006241,2.63e-23,52;UBERON:0007135,2.63e-23,52;UBERON:0001017,1.37e-22,73;UBERON:0001016,1.01e-21,75;UBERON:0002346,6.55e-20,64;UBERON:0003075,6.55e-20,64;UBERON:0007284,6.55e-20,64;UBERON:0002020,2.43e-19,34;UBERON:0000955,3.99e-19,47;UBERON:0006238,3.99e-19,47;UBERON:0004121,2.84e-18,95;UBERON:0000924,2.84e-18,95;UBERON:0006601,2.84e-18,95;UBERON:0002616,6.51e-18,46;UBERON:0010371,2.31e-16,73;UBERON:0003528,2.69e-15,29;UBERON:0002791,2.69e-15,29;UBERON:0001893,2.69e-15,29;UBERON:0003080,1.81e-14,40;UBERON:0010314,4.21e-14,92;UBERON:0002021,1.59e-13,10;UBERON:0000411,1.59e-13,10;UBERON:0001950,1.59e-13,10;UBERON:0002780,3.05e-13,39;UBERON:0001890,3.05e-13,39;UBERON:0006240,3.05e-13,39;UBERON:0003056,5.57e-13,49;UBERON:0002619,7.79e-11,17;UBERON:0003076,4.37e-10,12;UBERON:0003057,4.37e-10,12;UBERON:0000956,6.03e-10,21;UBERON:0001869,6.03e-10,21;UBERON:0000203,6.03e-10,21;UBERON:0000025,1.51e-07,114;UBERON:0002950,3.15e-07,4;UBERON:0001891,3.15e-07,4;UBERON:0009616,3.15e-07,4;UBERON:0010286,3.15e-07,4;UBERON:0004111,3.73e-07,122;UBERON:0002240,5.19e-07,6;UBERON:0005174,5.19e-07,6;UBERON:0001137,5.19e-07,6;UBERON:0002420,8.51e-07,8;UBERON:0007245,8.51e-07,8;UBERON:0010009,8.51e-07,8;UBERON:0010011,8.51e-07,8;UBERON:0000454,8.51e-07,8|phase1_expression=0.320297694209588,0,0,0,1.00179145989269,0.839396359559449,0.467225281191051,0.516493293766305,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0.137114433605739,0,1.36069264241712,0.297872853602656,0.261199789138935,0.159992422793407,0,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,0.573066879877513,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.135005938331691,0.630974884054146,1.14260393761521,1.76694832761291,0.61245399607477,0.191690942036473,0,1.10115880999389,2.93680877595932,2.76491759861238,1.05509030184155,0.731901148819277,0.52091337055676,2.23346399201105,1.12552522006336,1.68078072554491,1.76777151284201,1.56608848879013,0.559198337475902,0.151452386666368,0.226714680320357,0,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.280888840263504,0,0.519572009205738,0,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,0.5709193985953,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0,0.470354828542819,0.125666591329675,0.741584903203122,0.578397427679647,1.76922110389975,0.323533699894818,0.662524555381181,0,0,1.17112318804619,1.46612694769419,0.510914110417183,0,0,0,3.59497534571574,3.20250421973039,1.25654352112864,1.91206752211504,4.09144731728529,2.90903262383384,5.19172041816825,0.203678727700633,0.124406970610093,0.252722758433675,0.841767423545896,0.130120442962704,0.459804208866946,0.360124259610698,0.452114453507145,0.408218994907967,1.0249097622788,0.281105173679186,1.03481348295606,0,0.567318240503458,0.175951124163949,1.09597866213787,0.556094498451196,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0,0.473489471170421,0.196764231747404,0.617068451549513,0.232533944750408,0.804820204198858,0.817357396570186,1.15191894939436,0.656669856316381,1.13496333364198,0.438599962275997,0.658650345873152,0.536825675041487,3.36463917702604,1.64647379806855,0,0.528901133327089,0.8531530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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72795 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CC21,Q9D857 | |||
|association_with_transcript=-38bp_to_ENSMUST00000136477,NM_028360,NM_029704,uc007jiq.2,uc007jir.2,uc007jis.2_5end | |||
|cluster_id=chr11:62094926..62094936,+ | |||
|description=CAGE_peak_4_at_Ttc19_5end | |||
|id=chr11:62094926..62094936,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.75e-07!23;CL:0000337!8.75e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.95e-09,23;CL:0000337,3.95e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.77e-13!73;UBERON:0005743!2.77e-13!73;UBERON:0001049!4.83e-13!52;UBERON:0005068!4.83e-13!52;UBERON:0006241!4.83e-13!52;UBERON:0007135!4.83e-13!52;UBERON:0000073!1.14e-12!75;UBERON:0001016!1.14e-12!75;UBERON:0000033!1.29e-12!63;UBERON:0000955!2.07e-12!50;UBERON:0006238!2.07e-12!50;UBERON:0002346!5.55e-12!71;UBERON:0003075!5.55e-12!71;UBERON:0007284!5.55e-12!71;UBERON:0002616!7.35e-12!49;UBERON:0002020!1.44e-11!34;UBERON:0004121!1.88e-11!102;UBERON:0000924!1.88e-11!102;UBERON:0006601!1.88e-11!102;UBERON:0003056!9.83e-10!49;UBERON:0002791!2.12e-09!29;UBERON:0003528!2.12e-09!29;UBERON:0001893!2.12e-09!29;UBERON:0003080!2.52e-09!40;UBERON:0002780!9.27e-09!39;UBERON:0001890!9.27e-09!39;UBERON:0006240!9.27e-09!39;UBERON:0002021!2.93e-07!10;UBERON:0000411!2.93e-07!10;UBERON:0001950!2.93e-07!10;UBERON:0000025!9.46e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-25,54;UBERON:0001049,2.63e-23,52;UBERON:0005068,2.63e-23,52;UBERON:0006241,2.63e-23,52;UBERON:0007135,2.63e-23,52;UBERON:0001017,1.37e-22,73;UBERON:0001016,1.01e-21,75;UBERON:0002346,6.55e-20,64;UBERON:0003075,6.55e-20,64;UBERON:0007284,6.55e-20,64;UBERON:0002020,2.43e-19,34;UBERON:0000955,3.99e-19,47;UBERON:0006238,3.99e-19,47;UBERON:0004121,2.84e-18,95;UBERON:0000924,2.84e-18,95;UBERON:0006601,2.84e-18,95;UBERON:0002616,6.51e-18,46;UBERON:0010371,2.31e-16,73;UBERON:0003528,2.69e-15,29;UBERON:0002791,2.69e-15,29;UBERON:0001893,2.69e-15,29;UBERON:0003080,1.81e-14,40;UBERON:0010314,4.21e-14,92;UBERON:0002021,1.59e-13,10;UBERON:0000411,1.59e-13,10;UBERON:0001950,1.59e-13,10;UBERON:0002780,3.05e-13,39;UBERON:0001890,3.05e-13,39;UBERON:0006240,3.05e-13,39;UBERON:0003056,5.57e-13,49;UBERON:0002619,7.79e-11,17;UBERON:0003076,4.37e-10,12;UBERON:0003057,4.37e-10,12;UBERON:0000956,6.03e-10,21;UBERON:0001869,6.03e-10,21;UBERON:0000203,6.03e-10,21;UBERON:0000025,1.51e-07,114;UBERON:0002950,3.15e-07,4;UBERON:0001891,3.15e-07,4;UBERON:0009616,3.15e-07,4;UBERON:0010286,3.15e-07,4;UBERON:0004111,3.73e-07,122;UBERON:0002240,5.19e-07,6;UBERON:0005174,5.19e-07,6;UBERON:0001137,5.19e-07,6;UBERON:0002420,8.51e-07,8;UBERON:0007245,8.51e-07,8;UBERON:0010009,8.51e-07,8;UBERON:0010011,8.51e-07,8;UBERON:0000454,8.51e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,1.00179145989269,0.839396359559449,0.467225281191051,0.516493293766305,0,0,0,0.0797721589953364,0,0,0,0,0,0.157731082679119,0.137114433605739,0,1.36069264241712,0.297872853602656,0.261199789138935,0.159992422793407,0,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,0.573066879877513,0,0.809265843438391,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.135005938331691,0.630974884054146,1.14260393761521,1.76694832761291,0.61245399607477,0.191690942036473,0,1.10115880999389,2.93680877595932,2.76491759861238,1.05509030184155,0.731901148819277,0.52091337055676,2.23346399201105,1.12552522006336,1.68078072554491,1.76777151284201,1.56608848879013,0.559198337475902,0.151452386666368,0.226714680320357,0,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0.280888840263504,0,0.519572009205738,0,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,0.5709193985953,0.258937883647172,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0,0.470354828542819,0.125666591329675,0.741584903203122,0.578397427679647,1.76922110389975,0.323533699894818,0.662524555381181,0,0,1.17112318804619,1.46612694769419,0.510914110417183,0,0,0,3.59497534571574,3.20250421973039,1.25654352112864,1.91206752211504,4.09144731728529,2.90903262383384,5.19172041816825,0.203678727700633,0.124406970610093,0.252722758433675,0.841767423545896,0.130120442962704,0.459804208866946,0.360124259610698,0.452114453507145,0.408218994907967,1.0249097622788,0.281105173679186,1.03481348295606,0,0.567318240503458,0.175951124163949,1.09597866213787,0.556094498451196,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,0,0.621377317606506,0.234526059981096,0,0.473489471170421,0.196764231747404,0.617068451549513,0.232533944750408,0.804820204198858,0.817357396570186,1.15191894939436,0.656669856316381,1.13496333364198,0.438599962275997,0.658650345873152,0.536825675041487,3.36463917702604,1.64647379806855,0,0.528901133327089,0.853153002140936,0.464473343720877,0.257734922644187,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0.864552199498777,0,0.569003702859245,0.342745537829186,1.1270773567308,0.814605311381257,0,0.350679099451593,0.758838445491087,0.147610147979602,0.156998727841375,0.740382983530803,0.296452627087149,0.500535317148282,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.896987067609561,0.482443521363367,0.369506380333209,0.37898282354097,0.651859905768103,0.169745085775188,0.234690248288502,0.167506257441816,0,0.390267295715598,0.472905432318573,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,2.40825884981688,2.93029216480508,0.163934945376675,1.00988370881749,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0.566153061577665,0.404810701674894,0,0.790575555893047,1.92792789853084,0.283880170416537,0.712262414669021,0.651547837414304,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0,0.720244376125241,0.388076051348264,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.23467170806371,0.63549621259146,0,0.32977250588296,0.484393280087717,0.180938774784468,0.238744688006273,0.328281799490123,0,3.52308073819968,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0,0.108005340821801,0.418176592028937,0,0,0.578574190077352,0,0.129614973291793,0,1.69107881605257,0.149516546043979,0,0.583353565032143,0.258319646955462,0.168956125490778,0.234714477291508,1.0416350787516,1.25831213310853,0.966336483304024,2.01621004380506,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.0762068066549998,0,0.292373642219257,0.481059208201647,0.116876902181569,1.13365191807606,0.887943813496259,0.179427713218951,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0,5.0827665835536,0.920650473014354,3.43737308063638,2.06223818812425,1.37016503954128,3.7769694869485,1.35004500046361,1.80128481289688,4.07828168085784,1.55328093525546,0.207574695168353,1.19707462020309,0.341467211508268,0.486213434136588,0.838452650511929,0.367687016900028,1.11123363900808,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.89635213366817,0.34461281373368,0,0.579421629724277,0.964546102318525,0,0.441596760403192,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.658765662907314,0.25384382367503,0.1829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| |||
|short_description=p4@Ttc19 | |||
}} |
Latest revision as of 20:59, 1 October 2015
Short description: | p4@Ttc19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ttc19_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -38bp_to_ENSMUST00000136477, NM_028360, NM_029704, uc007jiq.2, uc007jir.2, uc007jis.2_5end |
EntrezGene: | Ttc19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.95e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.95e-09 | 23 |