FFCP PHASE1:Mm9::chr6:8898915..8898929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18231 | |EntrezGene=18231 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q61200 | |UniProt=Q61200 | ||
|association_with_transcript=301bp_to_ENSMUST00000160300,uc009aya.1,uc009ayb.1_5end | |association_with_transcript=301bp_to_ENSMUST00000160300,uc009aya.1,uc009ayb.1_5end | ||
|cluster_id=chr6:8898915..8898929,+ | |||
|description=CAGE_peak_3_at_Nxph1_5end | |description=CAGE_peak_3_at_Nxph1_5end | ||
|id=chr6:8898915..8898929,+ | |id=chr6:8898915..8898929,+ | ||
|ontology_enrichment_celltype=CL:0000117!7.60e-19!23;CL:0000337!7.60e-19!23;CL:0000540!3.21e-10!33;CL:0000047!3.21e-10!33;CL:0000031!3.21e-10!33;CL:0000404!3.21e-10!33;CL:0000393!7.51e-10!39;CL:0000211!7.51e-10!39;CL:0002319!3.85e-07!43;CL:0000055!7.73e-07!50;CL:0000221!8.66e-07!44;CL:0000133!8.66e-07!44 | |ontology_enrichment_celltype=CL:0000117!7.60e-19!23;CL:0000337!7.60e-19!23;CL:0000540!3.21e-10!33;CL:0000047!3.21e-10!33;CL:0000031!3.21e-10!33;CL:0000404!3.21e-10!33;CL:0000393!7.51e-10!39;CL:0000211!7.51e-10!39;CL:0002319!3.85e-07!43;CL:0000055!7.73e-07!50;CL:0000221!8.66e-07!44;CL:0000133!8.66e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.57e-28,23;CL:0000337,1.57e-28,23;CL:0000540,3.27e-18,33;CL:0000047,3.27e-18,33;CL:0000031,3.27e-18,33;CL:0000404,3.27e-18,33;CL:0000393,1.39e-14,39;CL:0000211,1.39e-14,39;CL:0002319,9.82e-13,43;CL:0000221,2.52e-12,44;CL:0000133,2.52e-12,44;CL:0002610,4.59e-07,3;CL:0002614,5.49e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.80e-23!34;UBERON:0001049!1.27e-20!52;UBERON:0005068!1.27e-20!52;UBERON:0006241!1.27e-20!52;UBERON:0007135!1.27e-20!52;UBERON:0000955!1.99e-19!50;UBERON:0006238!1.99e-19!50;UBERON:0002791!4.45e-19!29;UBERON:0003528!4.45e-19!29;UBERON:0001893!4.45e-19!29;UBERON:0001017!1.22e-18!73;UBERON:0005743!1.22e-18!73;UBERON:0002616!1.61e-18!49;UBERON:0000073!2.74e-18!75;UBERON:0001016!2.74e-18!75;UBERON:0002346!1.68e-17!71;UBERON:0003075!1.68e-17!71;UBERON:0007284!1.68e-17!71;UBERON:0000033!6.88e-17!63;UBERON:0003080!7.17e-16!40;UBERON:0003056!1.46e-15!49;UBERON:0004121!4.83e-15!102;UBERON:0000924!4.83e-15!102;UBERON:0006601!4.83e-15!102;UBERON:0002780!5.01e-15!39;UBERON:0001890!5.01e-15!39;UBERON:0006240!5.01e-15!39;UBERON:0000956!1.01e-12!21;UBERON:0001869!1.01e-12!21;UBERON:0000203!1.01e-12!21;UBERON:0002619!3.28e-10!17;UBERON:0007811!1.50e-09!86;UBERON:0002021!8.56e-09!10;UBERON:0000411!8.56e-09!10;UBERON:0001950!8.56e-09!10;UBERON:0000153!4.42e-08!94;UBERON:0002420!1.14e-07!8;UBERON:0007245!1.14e-07!8;UBERON:0010009!1.14e-07!8;UBERON:0010011!1.14e-07!8;UBERON:0000454!1.14e-07!8;UBERON:0002298!6.03e-07!6 | |ontology_enrichment_uberon=UBERON:0002020!2.80e-23!34;UBERON:0001049!1.27e-20!52;UBERON:0005068!1.27e-20!52;UBERON:0006241!1.27e-20!52;UBERON:0007135!1.27e-20!52;UBERON:0000955!1.99e-19!50;UBERON:0006238!1.99e-19!50;UBERON:0002791!4.45e-19!29;UBERON:0003528!4.45e-19!29;UBERON:0001893!4.45e-19!29;UBERON:0001017!1.22e-18!73;UBERON:0005743!1.22e-18!73;UBERON:0002616!1.61e-18!49;UBERON:0000073!2.74e-18!75;UBERON:0001016!2.74e-18!75;UBERON:0002346!1.68e-17!71;UBERON:0003075!1.68e-17!71;UBERON:0007284!1.68e-17!71;UBERON:0000033!6.88e-17!63;UBERON:0003080!7.17e-16!40;UBERON:0003056!1.46e-15!49;UBERON:0004121!4.83e-15!102;UBERON:0000924!4.83e-15!102;UBERON:0006601!4.83e-15!102;UBERON:0002780!5.01e-15!39;UBERON:0001890!5.01e-15!39;UBERON:0006240!5.01e-15!39;UBERON:0000956!1.01e-12!21;UBERON:0001869!1.01e-12!21;UBERON:0000203!1.01e-12!21;UBERON:0002619!3.28e-10!17;UBERON:0007811!1.50e-09!86;UBERON:0002021!8.56e-09!10;UBERON:0000411!8.56e-09!10;UBERON:0001950!8.56e-09!10;UBERON:0000153!4.42e-08!94;UBERON:0002420!1.14e-07!8;UBERON:0007245!1.14e-07!8;UBERON:0010009!1.14e-07!8;UBERON:0010011!1.14e-07!8;UBERON:0000454!1.14e-07!8;UBERON:0002298!6.03e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.46e-43,54;UBERON:0002020,1.16e-41,34;UBERON:0001049,5.71e-39,52;UBERON:0005068,5.71e-39,52;UBERON:0006241,5.71e-39,52;UBERON:0007135,5.71e-39,52;UBERON:0001017,2.52e-37,73;UBERON:0001016,4.65e-36,75;UBERON:0003528,3.15e-33,29;UBERON:0002791,3.15e-33,29;UBERON:0001893,3.15e-33,29;UBERON:0002346,1.07e-31,64;UBERON:0003075,1.07e-31,64;UBERON:0007284,1.07e-31,64;UBERON:0000955,2.30e-31,47;UBERON:0006238,2.30e-31,47;UBERON:0003080,1.06e-29,40;UBERON:0002616,1.31e-29,46;UBERON:0002780,5.39e-28,39;UBERON:0001890,5.39e-28,39;UBERON:0006240,5.39e-28,39;UBERON:0004121,9.50e-28,95;UBERON:0000924,9.50e-28,95;UBERON:0006601,9.50e-28,95;UBERON:0010371,1.25e-26,73;UBERON:0003056,1.37e-24,49;UBERON:0000956,1.38e-20,21;UBERON:0001869,1.38e-20,21;UBERON:0000203,1.38e-20,21;UBERON:0002619,2.52e-20,17;UBERON:0010314,3.40e-19,92;UBERON:0002021,2.96e-16,10;UBERON:0000411,2.96e-16,10;UBERON:0001950,2.96e-16,10;UBERON:0002420,5.67e-14,8;UBERON:0007245,5.67e-14,8;UBERON:0010009,5.67e-14,8;UBERON:0010011,5.67e-14,8;UBERON:0000454,5.67e-14,8;UBERON:0000025,8.76e-13,114;UBERON:0004111,2.34e-11,122;UBERON:0002240,5.23e-11,6;UBERON:0005174,5.23e-11,6;UBERON:0001137,5.23e-11,6;UBERON:0001948,1.81e-09,5;UBERON:0002315,1.81e-09,5;UBERON:0003076,2.97e-09,12;UBERON:0003057,2.97e-09,12;UBERON:0002950,7.98e-09,4;UBERON:0001891,7.98e-09,4;UBERON:0009616,7.98e-09,4;UBERON:0010286,7.98e-09,4;UBERON:0000369,1.30e-08,5;UBERON:0002435,1.30e-08,5;UBERON:0000204,1.30e-08,5;UBERON:0010082,1.30e-08,5;UBERON:0011216,1.09e-07,194;UBERON:0004684,4.59e-07,3;UBERON:0002275,4.59e-07,3;UBERON:0002038,5.49e-07,3;UBERON:0009663,5.49e-07,3;UBERON:0009661,5.49e-07,3;UBERON:0000125,5.49e-07,3;UBERON:0002308,5.49e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,2.42779753031517,2.64495489636016,0.633831403506179,0,0,0,0,0,0.898800331555214,0,0.933206510776299,0.945041568321835,1.47227472945967,3.42781181284564,3.53389665522582,2.69479758272899,1.43768206527355,2.75765635983006,13.2139057199266,3.70293280447044,4.14737639791857,3.56092976871523,2.10421580285542,2.08365348222704,3.62937898701795,5.06486349028512,4.12555268997387,2.94628585473668,2.56269025438385,3.54158947068071,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0.173485326766136,0,0,0,0.352766121407114,0.502666365318702,0,0.144599356919912,0,0,0,0,0,0,0.628340120440365,0,0,0,0,4.19413790333504,1.83000241127451,1.7591609295801,2.78118912307642,4.34716277461562,4.98691306942944,4.54275536589721,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0.384341160854549,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,3.36463917702604,1.44066457330998,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,4.17431533968259,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,6.74774764485795,0,0,0,0.164970122972535,0,0,0.604647113929502,0,0,0.922305443831782,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.241251699712623,0,0,0,2.78137953015765,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.247960367176008,0,0.129614973291793,0,1.12738587736838,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,1.38097570952153,2.86447756719698,2.57779773515531,4.11049511862385,2.2661816921691,4.05013500139084,1.35096360967266,4.07828168085784,2.5888015587591,0,1.19707462020309,0.170733605754134,0.486213434136588,0,0,1.11123363900808,1.03017528619447,0.962757628775446,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.448176066834085,0.689225627467359,0.476293691283074,0.347652977834566,0.38581844092741,1.23625770240992,0.294397840268795,0.685738504770831,0.532427418478012,0.715308569841963,0.436039249896986,0.658765662907314,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.394017929502254,0,0.619747364743864,1.15743966588685,0.249810577937946,1.16965804222704,0.214871054048298,0,0,0.231867835620421 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0.734187008646726,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,2.42779753031517,2.64495489636016,0.633831403506179,0,0,0,0,0,0.898800331555214,0,0.933206510776299,0.945041568321835,1.47227472945967,3.42781181284564,3.53389665522582,2.69479758272899,1.43768206527355,2.75765635983006,13.2139057199266,3.70293280447044,4.14737639791857,3.56092976871523,2.10421580285542,2.08365348222704,3.62937898701795,5.06486349028512,4.12555268997387,2.94628585473668,2.56269025438385,3.54158947068071,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0.173485326766136,0,0,0,0.352766121407114,0.502666365318702,0,0.144599356919912,0,0,0,0,0,0,0.628340120440365,0,0,0,0,4.19413790333504,1.83000241127451,1.7591609295801,2.78118912307642,4.34716277461562,4.98691306942944,4.54275536589721,0.203678727700633,0,0,0,0.130120442962704,0.229902104433473,0,0.150704817835715,0.136072998302656,0.384341160854549,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,3.36463917702604,1.44066457330998,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,4.17431533968259,4.45404409050372,0,0,0,0,0,0,0,0,0,0,0,6.74774764485795,0,0,0,0.164970122972535,0,0,0.604647113929502,0,0,0.922305443831782,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.241251699712623,0,0,0,2.78137953015765,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.247960367176008,0,0.129614973291793,0,1.12738587736838,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.12950368523413,1.38097570952153,2.86447756719698,2.57779773515531,4.11049511862385,2.2661816921691,4.05013500139084,1.35096360967266,4.07828168085784,2.5888015587591,0,1.19707462020309,0.170733605754134,0.486213434136588,0,0,1.11123363900808,1.03017528619447,0.962757628775446,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.448176066834085,0.689225627467359,0.476293691283074,0.347652977834566,0.38581844092741,1.23625770240992,0.294397840268795,0.685738504770831,0.532427418478012,0.715308569841963,0.436039249896986,0.658765662907314,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0.394017929502254,0,0.619747364743864,1.15743966588685,0.249810577937946,1.16965804222704,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p3@Nxph1 | |short_description=p3@Nxph1 | ||
}} | }} |
Latest revision as of 21:33, 1 October 2015
Short description: | p3@Nxph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nxph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 301bp_to_ENSMUST00000160300, uc009aya.1, uc009ayb.1_5end |
EntrezGene: | Nxph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.57e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.57e-28 | 23 |
neuron | 3.27e-18 | 33 |
neuronal stem cell | 3.27e-18 | 33 |
neuroblast | 3.27e-18 | 33 |
electrically signaling cell | 3.27e-18 | 33 |
electrically responsive cell | 1.39e-14 | 39 |
electrically active cell | 1.39e-14 | 39 |
neural cell | 9.82e-13 | 43 |
ectodermal cell | 2.52e-12 | 44 |
neurectodermal cell | 2.52e-12 | 44 |
raphe nuclei neuron | 4.59e-07 | 3 |
neuron of the substantia nigra | 5.49e-07 | 3 |