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FFCP PHASE1:Mm9::chrX:56387570..56387597,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:56387570..56387597,-
|DHSsupport=NA
|short_description=p7@Fgf13
|DPIdataset=NA
|description=CAGE_peak_7_at_Fgf13_5end
|association_with_transcript=15bp_to_ENSMUST00000033473,NM_010200,uc009tht.1_5end
|EntrezGene=14168
|EntrezGene=14168
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=Q8VCY9
|UniProt=Q8VCY9
|association_with_transcript=15bp_to_ENSMUST00000033473,NM_010200,uc009tht.1_5end
|cluster_id=chrX:56387570..56387597,-
|description=CAGE_peak_7_at_Fgf13_5end
|id=chrX:56387570..56387597,-
|ontology_enrichment_celltype=CL:0000117!3.27e-15!23;CL:0000337!3.27e-15!23;CL:0000540!5.22e-11!33;CL:0000047!5.22e-11!33;CL:0000031!5.22e-11!33;CL:0000404!5.22e-11!33;CL:0002319!4.30e-09!43;CL:0000221!5.21e-09!44;CL:0000133!5.21e-09!44;CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-24,23;CL:0000337,1.63e-24,23;CL:0000540,5.26e-16,33;CL:0000047,5.26e-16,33;CL:0000031,5.26e-16,33;CL:0000404,5.26e-16,33;CL:0002319,1.04e-12,43;CL:0000393,2.27e-12,39;CL:0000211,2.27e-12,39;CL:0000221,3.08e-12,44;CL:0000133,3.08e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.11e-21!73;UBERON:0005743!4.11e-21!73;UBERON:0001049!2.41e-20!52;UBERON:0005068!2.41e-20!52;UBERON:0006241!2.41e-20!52;UBERON:0007135!2.41e-20!52;UBERON:0000073!4.81e-20!75;UBERON:0001016!4.81e-20!75;UBERON:0003056!8.67e-20!49;UBERON:0000033!3.33e-19!63;UBERON:0000955!1.32e-18!50;UBERON:0006238!1.32e-18!50;UBERON:0002346!1.63e-18!71;UBERON:0003075!1.63e-18!71;UBERON:0007284!1.63e-18!71;UBERON:0002616!1.70e-18!49;UBERON:0002020!2.06e-18!34;UBERON:0004121!2.64e-17!102;UBERON:0000924!2.64e-17!102;UBERON:0006601!2.64e-17!102;UBERON:0003080!1.24e-16!40;UBERON:0002780!5.26e-16!39;UBERON:0001890!5.26e-16!39;UBERON:0006240!5.26e-16!39;UBERON:0002791!5.50e-15!29;UBERON:0003528!5.50e-15!29;UBERON:0001893!5.50e-15!29;UBERON:0007811!1.03e-11!86;UBERON:0000153!1.20e-11!94;UBERON:0000956!1.85e-10!21;UBERON:0001869!1.85e-10!21;UBERON:0000203!1.85e-10!21;UBERON:0002619!7.61e-09!17;UBERON:0000468!5.67e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.37e-29,64;UBERON:0003075,9.37e-29,64;UBERON:0007284,9.37e-29,64;UBERON:0000073,1.82e-28,54;UBERON:0001049,8.05e-26,52;UBERON:0005068,8.05e-26,52;UBERON:0006241,8.05e-26,52;UBERON:0007135,8.05e-26,52;UBERON:0002020,1.04e-25,34;UBERON:0001017,1.11e-25,73;UBERON:0001016,1.34e-24,75;UBERON:0004121,2.03e-24,95;UBERON:0000924,2.03e-24,95;UBERON:0006601,2.03e-24,95;UBERON:0010371,2.00e-23,73;UBERON:0003056,4.86e-23,49;UBERON:0003528,7.91e-20,29;UBERON:0002791,7.91e-20,29;UBERON:0001893,7.91e-20,29;UBERON:0010314,2.18e-19,92;UBERON:0002616,2.88e-19,46;UBERON:0000955,1.23e-18,47;UBERON:0006238,1.23e-18,47;UBERON:0003080,2.42e-18,40;UBERON:0002780,2.38e-17,39;UBERON:0001890,2.38e-17,39;UBERON:0006240,2.38e-17,39;UBERON:0000956,2.02e-13,21;UBERON:0001869,2.02e-13,21;UBERON:0000203,2.02e-13,21;UBERON:0002619,8.27e-12,17;UBERON:0002021,4.99e-09,10;UBERON:0000411,4.99e-09,10;UBERON:0001950,4.99e-09,10;UBERON:0002240,1.71e-08,6;UBERON:0005174,1.71e-08,6;UBERON:0001137,1.71e-08,6;UBERON:0003076,4.64e-08,12;UBERON:0003057,4.64e-08,12;UBERON:0000025,1.12e-07,114;UBERON:0002420,1.14e-07,8;UBERON:0007245,1.14e-07,8;UBERON:0010009,1.14e-07,8;UBERON:0010011,1.14e-07,8;UBERON:0000454,1.14e-07,8;UBERON:0001948,2.36e-07,5;UBERON:0002315,2.36e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0.234064526321993,0,0,0.856003649656029,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,0.219686182734472,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0.672187598284928,0,0.573066879877513,0,3.03474691289397,7.40587370980846,6.33831403506179,0,0,0,0,0,0.299600110518405,0,1.34796496001021,2.97013064329719,0.841299845405528,10.2834354385369,7.95126747425809,2.69479758272899,3.1629005436018,3.67687514644008,15.4162233399144,14.1732945274558,13.2101618600369,5.93488294785872,6.31264740856627,5.2091337055676,6.42120897703176,9.56696437053856,12.9878510610289,10.0173719061047,11.6744778255264,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.865964164044856,2.28023878927589,1.51657333504435,0.22836775943812,0.517875767294343,0,0.173485326766136,0,0.461230994512117,0,0.470354828542819,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,1.45462575940567,0,0,0.209446706813455,0,0,0,0,5.84183493678809,0.915001205637253,1.38219787324151,4.51943232499919,4.09144731728529,10.389402227978,6.32740925964255,0,0.124406970610093,0.252722758433675,0.420883711772948,1.30120442962704,1.37941262660084,1.62055916824814,1.05493372485001,1.02054748726992,2.0498195245576,1.03071897015702,2.06962696591213,0,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0.796137067273973,0,0,0,0.828503090142008,1.17263029990548,1.44049649168812,0.710234206755631,1.37734962223183,0.771335564436891,1.16266972375204,0.804820204198858,0.467061369468678,0.16455984991348,0,0,0,0,0.134206418760372,7.99101804543684,4.01327988279209,0,0,0.426576501070468,0.232236671860439,0.38660238396628,1.21010114774006,0.22237804384487,0.570676878337677,0,0.823494773620054,0.251335208800269,0.397912944082302,0.779856348476481,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0.786235980452812,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,7.54587772942622,7.2671245687166,0,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,0.642642632843614,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0.565815239267694,0.295301892880773,0,0,0,0,0.316036757935816,0,0,2.7235168460303,0.900305470156551,0.258717367565509,0,0.532020700926821,0.356737635204141,0.822745103010605,0.913394847343798,0,0,0.882113592219848,0.32977250588296,0.161464426695906,0.361877549568935,0.238744688006273,0.328281799490123,0,6.48988557036784,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.609958401380546,0.756037385752609,0.836353184057875,0.218362563746178,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,0,1.64468200648377,2.48187735685646,2.72231663681667,0.904118764344118,1.01373675294467,1.76035857968631,1.95306577265925,2.30690557736564,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0,0.100826185136841,0.584747284438515,0.384847366561318,0.116876902181569,0,0,0,0.167884616364078,0,0,0,0,0.501572104035363,2.82375921308533,5.06357760157895,5.15605962095457,3.78077001156113,4.11049511862385,8.3093328712867,2.70009000092722,0.900642406448441,1.81256963593682,4.14208249401456,0.518936737920883,0.399024873401031,0.853668028770671,0,1.25767897576789,1.65459157605013,0.888986911206461,0.412070114477788,2.56735367673452,0.758091635291392,2.02783439912192,0.377252682772152,1.03005658216871,1.34452820050225,1.03383844120104,0.952587382566147,0.811190281613988,0.77163688185482,0.412085900803307,1.17759136107518,0.342869252385415,0.70990322463735,0.476872379894642,1.30811774969096,0.941093804153306,0.676916863133412,0.365855945745545,0,0.543216455383447,0.561142271657738,0.949080144993393,1.28055827088233,1.22769312950907,0.309873682371932,1.54325288784913,1.99848462350357,0.935726433781634,0.644613162144895,0.57386499620653,1.10295709559758,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0.234064526321993,0,0,0.856003649656029,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18025156380447,0.219686182734472,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0.672187598284928,0,0.573066879877513,0,3.03474691289397,7.40587370980846,6.33831403506179,0,0,0,0,0,0.299600110518405,0,1.34796496001021,2.97013064329719,0.841299845405528,10.2834354385369,7.95126747425809,2.69479758272899,3.1629005436018,3.67687514644008,15.4162233399144,14.1732945274558,13.2101618600369,5.93488294785872,6.31264740856627,5.2091337055676,6.42120897703176,9.56696437053856,12.9878510610289,10.0173719061047,11.6744778255264,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.865964164044856,2.28023878927589,1.51657333504435,0.22836775943812,0.517875767294343,0,0.173485326766136,0,0.461230994512117,0,0.470354828542819,0,0,0.144599356919912,0,0.323533699894818,0.220841518460394,1.45462575940567,0,0,0.209446706813455,0,0,0,0,5.84183493678809,0.915001205637253,1.38219787324151,4.51943232499919,4.09144731728529,10.389402227978,6.32740925964255,0,0.124406970610093,0.252722758433675,0.420883711772948,1.30120442962704,1.37941262660084,1.62055916824814,1.05493372485001,1.02054748726992,2.0498195245576,1.03071897015702,2.06962696591213,0,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0.796137067273973,0,0,0,0.828503090142008,1.17263029990548,1.44049649168812,0.710234206755631,1.37734962223183,0.771335564436891,1.16266972375204,0.804820204198858,0.467061369468678,0.16455984991348,0,0,0,0,0.134206418760372,7.99101804543684,4.01327988279209,0,0,0.426576501070468,0.232236671860439,0.38660238396628,1.21010114774006,0.22237804384487,0.570676878337677,0,0.823494773620054,0.251335208800269,0.397912944082302,0.779856348476481,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0.786235980452812,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,7.54587772942622,7.2671245687166,0,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,0.395287777946524,0.642642632843614,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0,0,0.565815239267694,0.295301892880773,0,0,0,0,0.316036757935816,0,0,2.7235168460303,0.900305470156551,0.258717367565509,0,0.532020700926821,0.356737635204141,0.822745103010605,0.913394847343798,0,0,0.882113592219848,0.32977250588296,0.161464426695906,0.361877549568935,0.238744688006273,0.328281799490123,0,6.48988557036784,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.790839983952838,0.609958401380546,0.756037385752609,0.836353184057875,0.218362563746178,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,0,1.64468200648377,2.48187735685646,2.72231663681667,0.904118764344118,1.01373675294467,1.76035857968631,1.95306577265925,2.30690557736564,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0,0.100826185136841,0.584747284438515,0.384847366561318,0.116876902181569,0,0,0,0.167884616364078,0,0,0,0,0.501572104035363,2.82375921308533,5.06357760157895,5.15605962095457,3.78077001156113,4.11049511862385,8.3093328712867,2.70009000092722,0.900642406448441,1.81256963593682,4.14208249401456,0.518936737920883,0.399024873401031,0.853668028770671,0,1.25767897576789,1.65459157605013,0.888986911206461,0.412070114477788,2.56735367673452,0.758091635291392,2.02783439912192,0.377252682772152,1.03005658216871,1.34452820050225,1.03383844120104,0.952587382566147,0.811190281613988,0.77163688185482,0.412085900803307,1.17759136107518,0.342869252385415,0.70990322463735,0.476872379894642,1.30811774969096,0.941093804153306,0.676916863133412,0.365855945745545,0,0.543216455383447,0.561142271657738,0.949080144993393,1.28055827088233,1.22769312950907,0.309873682371932,1.54325288784913,1.99848462350357,0.935726433781634,0.644613162144895,0.57386499620653,1.10295709559758,0.695603506861264
|short_description=p7@Fgf13
}}
}}

Latest revision as of 22:25, 1 October 2015

Short description:p7@Fgf13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Fgf13_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: 15bp_to_ENSMUST00000033473, NM_010200, uc009tht.1_5end
EntrezGene:Fgf13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Fgf13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.55
medulla oblongata, neonate N30.CNhs11200.1396-42A37.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.63e-2423
neuroblast (sensu Vertebrata)1.63e-2423
neuron5.26e-1633
neuronal stem cell5.26e-1633
neuroblast5.26e-1633
electrically signaling cell5.26e-1633
neural cell1.04e-1243
electrically responsive cell2.27e-1239
electrically active cell2.27e-1239
ectodermal cell3.08e-1244
neurectodermal cell3.08e-1244

Uber anatomy
Ontology termp-valuen
neurectoderm9.37e-2964
neural plate9.37e-2964
presumptive neural plate9.37e-2964
regional part of nervous system1.82e-2854
neural tube8.05e-2652
neural rod8.05e-2652
future spinal cord8.05e-2652
neural keel8.05e-2652
gray matter1.04e-2534
central nervous system1.11e-2573
nervous system1.34e-2475
ectoderm-derived structure2.03e-2495
ectoderm2.03e-2495
presumptive ectoderm2.03e-2495
ecto-epithelium2.00e-2373
pre-chordal neural plate4.86e-2349
brain grey matter7.91e-2029
regional part of telencephalon7.91e-2029
telencephalon7.91e-2029
structure with developmental contribution from neural crest2.18e-1992
regional part of brain2.88e-1946
brain1.23e-1847
future brain1.23e-1847
anterior neural tube2.42e-1840
regional part of forebrain2.38e-1739
forebrain2.38e-1739
future forebrain2.38e-1739
cerebral cortex2.02e-1321
cerebral hemisphere2.02e-1321
pallium2.02e-1321
regional part of cerebral cortex8.27e-1217
occipital lobe4.99e-0910
visual cortex4.99e-0910
neocortex4.99e-0910
spinal cord1.71e-086
dorsal region element1.71e-086
dorsum1.71e-086
posterior neural tube4.64e-0812
chordal neural plate4.64e-0812
tube1.12e-07114
basal ganglion1.14e-078
nuclear complex of neuraxis1.14e-078
aggregate regional part of brain1.14e-078
collection of basal ganglia1.14e-078
cerebral subcortex1.14e-078
regional part of spinal cord2.36e-075
gray matter of spinal cord2.36e-075
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