Personal tools

FFCP PHASE1:Mm9::chr13:88961313..88961324,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:88961313..88961324,+
|DHSsupport=NA
|short_description=p7@Edil3
|DPIdataset=NA
|description=CAGE_peak_7_at_Edil3_5end
|association_with_transcript=66bp_to_ENSMUST00000043111_5end
|EntrezGene=13612
|EntrezGene=13612
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8C4U8
|UniProt=Q8C4U8
|association_with_transcript=66bp_to_ENSMUST00000043111_5end
|cluster_id=chr13:88961313..88961324,+
|description=CAGE_peak_7_at_Edil3_5end
|id=chr13:88961313..88961324,+
|ontology_enrichment_celltype=CL:0000117!4.81e-12!23;CL:0000337!4.81e-12!23;CL:0000540!3.83e-11!33;CL:0000047!3.83e-11!33;CL:0000031!3.83e-11!33;CL:0000404!3.83e-11!33;CL:0000393!3.42e-08!39;CL:0000211!3.42e-08!39;CL:0000221!2.55e-07!44;CL:0000133!2.55e-07!44;CL:0002319!2.82e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.37e-14,23;CL:0000337,1.37e-14,23;CL:0000540,2.53e-09,33;CL:0000047,2.53e-09,33;CL:0000031,2.53e-09,33;CL:0000404,2.53e-09,33;CL:0002610,8.08e-09,3;CL:0002614,4.69e-08,3;CL:0000393,1.79e-07,39;CL:0000211,1.79e-07,39;CL:0002612,3.94e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.99e-23!75;UBERON:0001016!5.99e-23!75;UBERON:0001017!2.09e-22!73;UBERON:0005743!2.09e-22!73;UBERON:0001049!1.06e-20!52;UBERON:0005068!1.06e-20!52;UBERON:0006241!1.06e-20!52;UBERON:0007135!1.06e-20!52;UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!5.27e-19!49;UBERON:0002346!6.25e-19!71;UBERON:0003075!6.25e-19!71;UBERON:0007284!6.25e-19!71;UBERON:0000033!2.90e-18!63;UBERON:0004121!3.33e-18!102;UBERON:0000924!3.33e-18!102;UBERON:0006601!3.33e-18!102;UBERON:0002020!7.27e-17!34;UBERON:0003080!1.62e-15!40;UBERON:0003056!3.25e-15!49;UBERON:0002780!1.01e-14!39;UBERON:0001890!1.01e-14!39;UBERON:0006240!1.01e-14!39;UBERON:0002791!1.32e-13!29;UBERON:0003528!1.32e-13!29;UBERON:0001893!1.32e-13!29;UBERON:0000956!1.84e-09!21;UBERON:0001869!1.84e-09!21;UBERON:0000203!1.84e-09!21;UBERON:0000153!2.22e-09!94;UBERON:0002021!4.93e-09!10;UBERON:0000411!4.93e-09!10;UBERON:0001950!4.93e-09!10;UBERON:0007811!6.43e-09!86;UBERON:0002619!1.86e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.27e-40,54;UBERON:0001049,2.97e-36,52;UBERON:0005068,2.97e-36,52;UBERON:0006241,2.97e-36,52;UBERON:0007135,2.97e-36,52;UBERON:0001017,1.22e-34,73;UBERON:0001016,1.58e-33,75;UBERON:0002346,2.73e-30,64;UBERON:0003075,2.73e-30,64;UBERON:0007284,2.73e-30,64;UBERON:0002020,8.20e-30,34;UBERON:0000955,1.56e-27,47;UBERON:0006238,1.56e-27,47;UBERON:0004121,1.20e-26,95;UBERON:0000924,1.20e-26,95;UBERON:0006601,1.20e-26,95;UBERON:0002616,6.23e-26,46;UBERON:0010371,1.01e-25,73;UBERON:0002021,4.99e-24,10;UBERON:0000411,4.99e-24,10;UBERON:0001950,4.99e-24,10;UBERON:0003080,6.29e-23,40;UBERON:0003528,3.31e-21,29;UBERON:0002791,3.31e-21,29;UBERON:0001893,3.31e-21,29;UBERON:0002780,4.97e-21,39;UBERON:0001890,4.97e-21,39;UBERON:0006240,4.97e-21,39;UBERON:0003056,1.30e-19,49;UBERON:0010314,5.23e-19,92;UBERON:0002619,3.41e-16,17;UBERON:0000956,3.31e-15,21;UBERON:0001869,3.31e-15,21;UBERON:0000203,3.31e-15,21;UBERON:0003076,5.05e-14,12;UBERON:0003057,5.05e-14,12;UBERON:0002240,4.59e-13,6;UBERON:0005174,4.59e-13,6;UBERON:0001137,4.59e-13,6;UBERON:0000025,6.53e-13,114;UBERON:0004111,1.26e-11,122;UBERON:0001948,7.40e-11,5;UBERON:0002315,7.40e-11,5;UBERON:0002950,1.45e-10,4;UBERON:0001891,1.45e-10,4;UBERON:0009616,1.45e-10,4;UBERON:0010286,1.45e-10,4;UBERON:0004684,8.08e-09,3;UBERON:0002275,8.08e-09,3;UBERON:0011216,1.72e-08,194;UBERON:0002038,4.69e-08,3;UBERON:0009663,4.69e-08,3;UBERON:0009661,4.69e-08,3;UBERON:0000125,4.69e-08,3;UBERON:0002308,4.69e-08,3;UBERON:0002420,3.72e-07,8;UBERON:0007245,3.72e-07,8;UBERON:0010009,3.72e-07,8;UBERON:0010011,3.72e-07,8;UBERON:0000454,3.72e-07,8;UBERON:0002257,3.94e-07,3;UBERON:0000483,7.79e-07,174
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0.829516898467821,0.540023753326763,0.630974884054146,2.28520787523043,2.42955395046775,0,0.0958454710182364,0.919218786610021,6.60695285996332,6.12899222808901,5.83704826373725,1.05509030184155,0.182975287204819,0.52091337055676,5.58365998002762,3.37657566019008,4.5839474333043,3.24091444021034,1.42371680799103,1.3047961207771,0.075726193333184,0.831287161174641,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.485300549842228,0.662524555381181,0.484875253135222,0,0.878342391034642,1.04723353406728,0,0,0,0,6.89036941262184,3.20250421973039,0.628271760564322,5.21472960576829,4.34716277461562,3.74018480207208,4.2182728397617,0.203678727700633,0.124406970610093,0,0.631325567659422,0.260240885925407,0,0,0.30140963567143,0,0.512454881139399,0.0937017245597288,1.29351685369508,0,0,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,0.621377317606506,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,5.25724871410318,0.720332286654991,0,0,0,0.696710015581316,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.228497025219458,1.1270773567308,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0.469380496577004,0,0,0.585400943573396,0.945810864637146,0.664394068946325,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0,0,0,6.74312477948726,4.10240903072711,0.491804836130026,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0.849229592366497,0,0.876767573733936,0,1.60660658210904,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,4.42571487479924,0,0.258717367565509,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,7.90652579663893,4.60325236507177,6.30185064783336,3.60891682921744,4.7955776383945,4.5323633843382,6.75022500231806,2.70192721934532,5.43770890781046,5.1776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0,0,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0,0.280924522409647,0.320125762024346,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.592302255241736,0.365855945745545,0.526139422875686,0.271608227691724,0,0.237270036248348,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,0.249810577937946,0,0.214871054048298,0.57386499620653,0.661774257358546,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0.889294796111139,0,0,0,0,0,0.829516898467821,0.540023753326763,0.630974884054146,2.28520787523043,2.42955395046775,0,0.0958454710182364,0.919218786610021,6.60695285996332,6.12899222808901,5.83704826373725,1.05509030184155,0.182975287204819,0.52091337055676,5.58365998002762,3.37657566019008,4.5839474333043,3.24091444021034,1.42371680799103,1.3047961207771,0.075726193333184,0.831287161174641,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0.485300549842228,0.662524555381181,0.484875253135222,0,0.878342391034642,1.04723353406728,0,0,0,0,6.89036941262184,3.20250421973039,0.628271760564322,5.21472960576829,4.34716277461562,3.74018480207208,4.2182728397617,0.203678727700633,0.124406970610093,0,0.631325567659422,0.260240885925407,0,0,0.30140963567143,0,0.512454881139399,0.0937017245597288,1.29351685369508,0,0,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,0.621377317606506,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,5.25724871410318,0.720332286654991,0,0,0,0.696710015581316,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.228497025219458,1.1270773567308,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0.469380496577004,0,0,0.585400943573396,0.945810864637146,0.664394068946325,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0,0,0,6.74312477948726,4.10240903072711,0.491804836130026,0,0,0.390438744296638,0.430846795465598,0.238968797952552,0.668396022247182,0.849229592366497,0,0.876767573733936,0,1.60660658210904,0,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,4.42571487479924,0,0.258717367565509,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,7.90652579663893,4.60325236507177,6.30185064783336,3.60891682921744,4.7955776383945,4.5323633843382,6.75022500231806,2.70192721934532,5.43770890781046,5.1776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.486213434136588,0,0,0.666740183404846,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0,0.280924522409647,0.320125762024346,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.592302255241736,0.365855945745545,0.526139422875686,0.271608227691724,0,0.237270036248348,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,0.249810577937946,0,0.214871054048298,0.57386499620653,0.661774257358546,0.463735671240843
|short_description=p7@Edil3
}}
}}

Latest revision as of 23:52, 1 October 2015

Short description:p7@Edil3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Edil3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 66bp_to_ENSMUST00000043111_5end
EntrezGene:Edil3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Edil3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.27e-4054
neural tube2.97e-3652
neural rod2.97e-3652
future spinal cord2.97e-3652
neural keel2.97e-3652
central nervous system1.22e-3473
nervous system1.58e-3375
neurectoderm2.73e-3064
neural plate2.73e-3064
presumptive neural plate2.73e-3064
gray matter8.20e-3034
brain1.56e-2747
future brain1.56e-2747
ectoderm-derived structure1.20e-2695
ectoderm1.20e-2695
presumptive ectoderm1.20e-2695
regional part of brain6.23e-2646
ecto-epithelium1.01e-2573
occipital lobe4.99e-2410
visual cortex4.99e-2410
neocortex4.99e-2410
anterior neural tube6.29e-2340
brain grey matter3.31e-2129
regional part of telencephalon3.31e-2129
telencephalon3.31e-2129
regional part of forebrain4.97e-2139
forebrain4.97e-2139
future forebrain4.97e-2139
pre-chordal neural plate1.30e-1949
structure with developmental contribution from neural crest5.23e-1992
regional part of cerebral cortex3.41e-1617
cerebral cortex3.31e-1521
cerebral hemisphere3.31e-1521
pallium3.31e-1521
posterior neural tube5.05e-1412
chordal neural plate5.05e-1412
spinal cord4.59e-136
dorsal region element4.59e-136
dorsum4.59e-136
tube6.53e-13114
anatomical conduit1.26e-11122
regional part of spinal cord7.40e-115
gray matter of spinal cord7.40e-115
regional part of midbrain1.45e-104
midbrain1.45e-104
presumptive midbrain1.45e-104
midbrain neural tube1.45e-104
raphe nuclei8.08e-093
reticular formation8.08e-093
organ system subdivision1.72e-08194
substantia nigra4.69e-083
telencephalic nucleus4.69e-083
midbrain nucleus4.69e-083
neural nucleus4.69e-083
nucleus of brain4.69e-083
basal ganglion3.72e-078
nuclear complex of neuraxis3.72e-078
aggregate regional part of brain3.72e-078
collection of basal ganglia3.72e-078
cerebral subcortex3.72e-078
ventral horn of spinal cord3.94e-073
epithelium7.79e-07174
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:88961313..88961324,%2B&oldid=4328839"