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FFCP PHASE1:Mm9::chr19:23833282..23833297,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:23833282..23833297,+
|DHSsupport=NA
|short_description=p2@Apba1
|DPIdataset=NA
|description=CAGE_peak_2_at_Apba1_5end
|association_with_transcript=-68bp_to_ENSMUST00000025830,NM_177034,uc008hai.1,uc012bjp.1_5end
|EntrezGene=319924
|EntrezGene=319924
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3UH49,Q8BMF2,Q3UH26
|UniProt=Q3UH49,Q8BMF2,Q3UH26
|association_with_transcript=-68bp_to_ENSMUST00000025830,NM_177034,uc008hai.1,uc012bjp.1_5end
|cluster_id=chr19:23833282..23833297,+
|description=CAGE_peak_2_at_Apba1_5end
|id=chr19:23833282..23833297,+
|ontology_enrichment_celltype=CL:0000117!1.69e-14!23;CL:0000337!1.69e-14!23;CL:0000540!3.80e-12!33;CL:0000047!3.80e-12!33;CL:0000031!3.80e-12!33;CL:0000404!3.80e-12!33;CL:0000393!1.24e-09!39;CL:0000211!1.24e-09!39;CL:0000221!8.51e-08!44;CL:0000133!8.51e-08!44;CL:0002319!1.49e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-23,23;CL:0000337,9.45e-23,23;CL:0000540,1.31e-15,33;CL:0000047,1.31e-15,33;CL:0000031,1.31e-15,33;CL:0000404,1.31e-15,33;CL:0000393,6.51e-12,39;CL:0000211,6.51e-12,39;CL:0000221,2.51e-11,44;CL:0000133,2.51e-11,44;CL:0002319,6.19e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.06e-21!71;UBERON:0003075!4.06e-21!71;UBERON:0007284!4.06e-21!71;UBERON:0001017!3.19e-20!73;UBERON:0005743!3.19e-20!73;UBERON:0000073!3.82e-20!75;UBERON:0001016!3.82e-20!75;UBERON:0001049!3.14e-19!52;UBERON:0005068!3.14e-19!52;UBERON:0006241!3.14e-19!52;UBERON:0007135!3.14e-19!52;UBERON:0004121!9.06e-19!102;UBERON:0000924!9.06e-19!102;UBERON:0006601!9.06e-19!102;UBERON:0002020!2.57e-18!34;UBERON:0000033!8.00e-18!63;UBERON:0000955!1.28e-17!50;UBERON:0006238!1.28e-17!50;UBERON:0002616!3.98e-17!49;UBERON:0003056!1.01e-15!49;UBERON:0002791!9.11e-15!29;UBERON:0003528!9.11e-15!29;UBERON:0001893!9.11e-15!29;UBERON:0003080!1.17e-14!40;UBERON:0002780!4.47e-14!39;UBERON:0001890!4.47e-14!39;UBERON:0006240!4.47e-14!39;UBERON:0007811!9.28e-11!86;UBERON:0000956!6.36e-10!21;UBERON:0001869!6.36e-10!21;UBERON:0000203!6.36e-10!21;UBERON:0000153!4.01e-09!94;UBERON:0002619!6.16e-08!17;UBERON:0002021!9.08e-08!10;UBERON:0000411!9.08e-08!10;UBERON:0001950!9.08e-08!10;UBERON:0000468!6.36e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.02e-31,54;UBERON:0002020,1.68e-30,34;UBERON:0001017,7.61e-29,73;UBERON:0001049,1.50e-28,52;UBERON:0005068,1.50e-28,52;UBERON:0006241,1.50e-28,52;UBERON:0007135,1.50e-28,52;UBERON:0001016,1.32e-27,75;UBERON:0002346,1.93e-26,64;UBERON:0003075,1.93e-26,64;UBERON:0007284,1.93e-26,64;UBERON:0003528,1.33e-24,29;UBERON:0002791,1.33e-24,29;UBERON:0001893,1.33e-24,29;UBERON:0004121,6.19e-24,95;UBERON:0000924,6.19e-24,95;UBERON:0006601,6.19e-24,95;UBERON:0010371,3.22e-23,73;UBERON:0000955,6.77e-23,47;UBERON:0006238,6.77e-23,47;UBERON:0002616,3.98e-22,46;UBERON:0003056,5.36e-20,49;UBERON:0003080,5.44e-20,40;UBERON:0002780,4.46e-19,39;UBERON:0001890,4.46e-19,39;UBERON:0006240,4.46e-19,39;UBERON:0000956,1.45e-16,21;UBERON:0001869,1.45e-16,21;UBERON:0000203,1.45e-16,21;UBERON:0010314,6.41e-16,92;UBERON:0002619,2.77e-13,17;UBERON:0002021,9.93e-12,10;UBERON:0000411,9.93e-12,10;UBERON:0001950,9.93e-12,10;UBERON:0002420,3.29e-09,8;UBERON:0007245,3.29e-09,8;UBERON:0010009,3.29e-09,8;UBERON:0010011,3.29e-09,8;UBERON:0000454,3.29e-09,8;UBERON:0003076,4.71e-09,12;UBERON:0003057,4.71e-09,12;UBERON:0002240,6.51e-08,6;UBERON:0005174,6.51e-08,6;UBERON:0001137,6.51e-08,6;UBERON:0001948,4.57e-07,5;UBERON:0002315,4.57e-07,5
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,7.48570905180512,4.7609188134483,6.97214543856797,0,0,0,0,0,0,1.53687322128622,5.39185984004084,5.26523159493594,4.20649922702764,13.9968982357864,14.1355866209033,5.26710436624302,5.55903731905771,4.5960939330501,5.50579404996943,12.6410464704336,12.4421291937557,6.4624280987795,6.95306091378313,5.2091337055676,10.0505879640497,9.56696437053856,11.0014738399303,11.1958862479994,14.2371680799103,8.57437450796383,0.37863096666592,0.377857800533928,0,0,0,0,0,0,0,0,0,0,1.12674735821344,1.28326477414318,5.09610479413291,0,0,0,0,0.45673551887624,0,1.03909497345377,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.705532242814229,0.251333182659351,0,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,6.44117753425404,7.95897485891129,0,0.479260498023681,0,0,8.23848516726525,9.15001205637253,14.827213549318,8.8650403298061,14.0643501531682,11.2205544062162,8.76102820565891,0.611036183101898,0.497627882440372,0,0.631325567659422,0,0.459804208866946,0.540186389416048,1.20563854268572,1.56483948048054,1.2811372028485,2.15513966487376,2.32833033665114,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.822799249567402,0,0.729619285912702,0.584799949701329,0.219550115291051,0.536825675041487,6.51898840548794,8.54108282748061,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0.380451252225118,0,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0.814605311381257,1.35766741017338,0.841629838683823,0.885311519739602,0,0.31399745568275,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.339490171550376,0,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0,0.637819074629948,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,7.86697890940181,9.49414661396846,0.163934945376675,0,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0,1.46127928955656,0,4.4984984299053,0.141940085208269,0.534196811001766,1.62886959353576,0.989820737835213,0,0,0,0.377210159511796,0,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.891844088010353,0.822745103010605,0.608929898229199,0,0.21183207086382,0.661585194164886,0,0.484393280087717,0.72375509913787,0.119372344003136,0.164140899745061,0.291480836629851,7.6024373824309,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.540026704109006,0.209088296014469,0,0.674321731924103,0.495920734352016,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.651021924219751,0.209718688851422,0,0,0.632022241256357,0,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0,0.0962118416403295,0.350630706544707,0,0,0,0.335769232728157,0.386379188064381,0,0.549454872801795,0,0,12.4245405375755,7.82552902062201,12.0308057822273,14.2638141345261,10.9613203163303,9.06472676867641,10.1253375034771,9.45674526770863,8.60970577069989,7.7664046762773,0.415149390336707,0.798049746802062,0.853668028770671,0.972426868273176,2.30574478890781,2.02227859295016,1.55572709461131,1.64828045791115,2.24643446714271,0.758091635291392,1.01391719956096,0.565879024158229,1.68554713445788,2.11283002936069,1.49332219284595,0.952587382566147,1.62238056322798,1.54327376370964,1.23625770240992,1.61918812147837,1.02860775715625,1.06485483695602,1.66905332963125,2.61623549938191,1.41164070622996,1.94613598150856,1.64635175585495,2.10455769150274,1.62964936615034,3.36685362994643,2.13543032623513,2.75812550651578,2.04615521584845,2.01417893541756,1.15743966588685,3.49734809113124,1.16965804222704,0.214871054048298,0.765153328275374,1.10295709559758,1.62307484934295
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,7.48570905180512,4.7609188134483,6.97214543856797,0,0,0,0,0,0,1.53687322128622,5.39185984004084,5.26523159493594,4.20649922702764,13.9968982357864,14.1355866209033,5.26710436624302,5.55903731905771,4.5960939330501,5.50579404996943,12.6410464704336,12.4421291937557,6.4624280987795,6.95306091378313,5.2091337055676,10.0505879640497,9.56696437053856,11.0014738399303,11.1958862479994,14.2371680799103,8.57437450796383,0.37863096666592,0.377857800533928,0,0,0,0,0,0,0,0,0,0,1.12674735821344,1.28326477414318,5.09610479413291,0,0,0,0,0.45673551887624,0,1.03909497345377,0.520455980298408,0.608930956624282,0.461230994512117,0.452167921657868,0.705532242814229,0.251333182659351,0,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,6.44117753425404,7.95897485891129,0,0.479260498023681,0,0,8.23848516726525,9.15001205637253,14.827213549318,8.8650403298061,14.0643501531682,11.2205544062162,8.76102820565891,0.611036183101898,0.497627882440372,0,0.631325567659422,0,0.459804208866946,0.540186389416048,1.20563854268572,1.56483948048054,1.2811372028485,2.15513966487376,2.32833033665114,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0.411564272815887,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0.822799249567402,0,0.729619285912702,0.584799949701329,0.219550115291051,0.536825675041487,6.51898840548794,8.54108282748061,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0.380451252225118,0,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.342745537829186,0,0.814605311381257,1.35766741017338,0.841629838683823,0.885311519739602,0,0.31399745568275,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0.339490171550376,0,0.502518772325447,0.238043640886014,0.390267295715598,0.315270288212382,0,0.637819074629948,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,7.86697890940181,9.49414661396846,0.163934945376675,0,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0,1.46127928955656,0,4.4984984299053,0.141940085208269,0.534196811001766,1.62886959353576,0.989820737835213,0,0,0,0.377210159511796,0,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.891844088010353,0.822745103010605,0.608929898229199,0,0.21183207086382,0.661585194164886,0,0.484393280087717,0.72375509913787,0.119372344003136,0.164140899745061,0.291480836629851,7.6024373824309,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.540026704109006,0.209088296014469,0,0.674321731924103,0.495920734352016,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.651021924219751,0.209718688851422,0,0,0.632022241256357,0,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0,0.0962118416403295,0.350630706544707,0,0,0,0.335769232728157,0.386379188064381,0,0.549454872801795,0,0,12.4245405375755,7.82552902062201,12.0308057822273,14.2638141345261,10.9613203163303,9.06472676867641,10.1253375034771,9.45674526770863,8.60970577069989,7.7664046762773,0.415149390336707,0.798049746802062,0.853668028770671,0.972426868273176,2.30574478890781,2.02227859295016,1.55572709461131,1.64828045791115,2.24643446714271,0.758091635291392,1.01391719956096,0.565879024158229,1.68554713445788,2.11283002936069,1.49332219284595,0.952587382566147,1.62238056322798,1.54327376370964,1.23625770240992,1.61918812147837,1.02860775715625,1.06485483695602,1.66905332963125,2.61623549938191,1.41164070622996,1.94613598150856,1.64635175585495,2.10455769150274,1.62964936615034,3.36685362994643,2.13543032623513,2.75812550651578,2.04615521584845,2.01417893541756,1.15743966588685,3.49734809113124,1.16965804222704,0.214871054048298,0.765153328275374,1.10295709559758,1.62307484934295
|short_description=p2@Apba1
}}
}}

Latest revision as of 00:06, 2 October 2015

Short description:p2@Apba1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Apba1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -68bp_to_ENSMUST00000025830, NM_177034, uc008hai.1, uc012bjp.1_5end
EntrezGene:Apba1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Apba1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.24
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F114.83
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F211.22
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G18.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A39.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.45e-2323
neuroblast (sensu Vertebrata)9.45e-2323
neuron1.31e-1533
neuronal stem cell1.31e-1533
neuroblast1.31e-1533
electrically signaling cell1.31e-1533
electrically responsive cell6.51e-1239
electrically active cell6.51e-1239
ectodermal cell2.51e-1144
neurectodermal cell2.51e-1144
neural cell6.19e-1143

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.02e-3154
gray matter1.68e-3034
central nervous system7.61e-2973
neural tube1.50e-2852
neural rod1.50e-2852
future spinal cord1.50e-2852
neural keel1.50e-2852
nervous system1.32e-2775
neurectoderm1.93e-2664
neural plate1.93e-2664
presumptive neural plate1.93e-2664
brain grey matter1.33e-2429
regional part of telencephalon1.33e-2429
telencephalon1.33e-2429
ectoderm-derived structure6.19e-2495
ectoderm6.19e-2495
presumptive ectoderm6.19e-2495
ecto-epithelium3.22e-2373
brain6.77e-2347
future brain6.77e-2347
regional part of brain3.98e-2246
pre-chordal neural plate5.36e-2049
anterior neural tube5.44e-2040
regional part of forebrain4.46e-1939
forebrain4.46e-1939
future forebrain4.46e-1939
cerebral cortex1.45e-1621
cerebral hemisphere1.45e-1621
pallium1.45e-1621
structure with developmental contribution from neural crest6.41e-1692
regional part of cerebral cortex2.77e-1317
occipital lobe9.93e-1210
visual cortex9.93e-1210
neocortex9.93e-1210
basal ganglion3.29e-098
nuclear complex of neuraxis3.29e-098
aggregate regional part of brain3.29e-098
collection of basal ganglia3.29e-098
cerebral subcortex3.29e-098
posterior neural tube4.71e-0912
chordal neural plate4.71e-0912
spinal cord6.51e-086
dorsal region element6.51e-086
dorsum6.51e-086
regional part of spinal cord4.57e-075
gray matter of spinal cord4.57e-075
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