FF:11255-116F4: Difference between revisions

Latest revision as of 16:28, 3 June 2020

Name:	Sertoli Cells, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs10851
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	testis
dev stage	23 years old adult
sex	male
age	23
cell type	sertoli cell
cell line	NA
company	Lonza
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005843

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10851		CAGE		DRX008450		DRR009322

Accession ID Hg19

Library id		BAM		CTSS
CNhs10851		DRZ000747		DRZ002132

Accession ID Hg38

Library id		BAM		CTSS
CNhs10851		DRZ012097		DRZ013482

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

RNA-Seq Accession numbers

Method		Sample accession id
sRNA-Seq		SAMD00005843

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
SRhi10003.GTAGAG		sRNA-Seq		DRX037025		DRR041391

Accession ID Hg19

Library id		BAM		CTSS
SRhi10003.GTAGAG		DRZ007033

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.117
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.155
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.625
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0842
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.163
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.416
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.129
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.125
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.143
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.416
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0202
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0322
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.059
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.625
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.625
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	1.088
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.765
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.416
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10851

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.568
MA0003.1	MA0003.1	0.423
MA0004.1	MA0004.1	0.109
MA0006.1	MA0006.1	0.469
MA0007.1	MA0007.1	0.157
MA0009.1	MA0009.1	0.401
MA0014.1	MA0014.1	0.314
MA0017.1	MA0017.1	0.303
MA0018.2	MA0018.2	1.53121e-6
MA0019.1	MA0019.1	0.397
MA0024.1	MA0024.1	2.2918e-4
MA0025.1	MA0025.1	0.0793
MA0027.1	MA0027.1	0.987
MA0028.1	MA0028.1	6.00347e-4
MA0029.1	MA0029.1	0.85
MA0030.1	MA0030.1	0.279
MA0031.1	MA0031.1	0.293
MA0035.2	MA0035.2	0.656
MA0038.1	MA0038.1	0.00619
MA0039.2	MA0039.2	0.0457
MA0040.1	MA0040.1	0.371
MA0041.1	MA0041.1	0.421
MA0042.1	MA0042.1	0.979
MA0043.1	MA0043.1	0.00324
MA0046.1	MA0046.1	0.811
MA0047.2	MA0047.2	0.444
MA0048.1	MA0048.1	0.906
MA0050.1	MA0050.1	0.422
MA0051.1	MA0051.1	0.928
MA0052.1	MA0052.1	0.429
MA0055.1	MA0055.1	0.255
MA0057.1	MA0057.1	0.194
MA0058.1	MA0058.1	0.0125
MA0059.1	MA0059.1	0.888
MA0060.1	MA0060.1	1.98668e-9
MA0061.1	MA0061.1	0.627
MA0062.2	MA0062.2	4.46511e-10
MA0065.2	MA0065.2	0.198
MA0066.1	MA0066.1	0.194
MA0067.1	MA0067.1	0.001
MA0068.1	MA0068.1	0.325
MA0069.1	MA0069.1	0.353
MA0070.1	MA0070.1	0.653
MA0071.1	MA0071.1	0.532
MA0072.1	MA0072.1	0.638
MA0073.1	MA0073.1	0.632
MA0074.1	MA0074.1	0.474
MA0076.1	MA0076.1	4.41584e-5
MA0077.1	MA0077.1	0.83
MA0078.1	MA0078.1	0.517
MA0079.2	MA0079.2	0.471
MA0080.2	MA0080.2	1.36181e-7
MA0081.1	MA0081.1	0.00348
MA0083.1	MA0083.1	0.0248
MA0084.1	MA0084.1	0.694
MA0087.1	MA0087.1	0.778
MA0088.1	MA0088.1	0.789
MA0090.1	MA0090.1	1.20374e-7
MA0091.1	MA0091.1	0.00779
MA0092.1	MA0092.1	0.0059
MA0093.1	MA0093.1	0.0658
MA0099.2	MA0099.2	0.371
MA0100.1	MA0100.1	0.287
MA0101.1	MA0101.1	0.26
MA0102.2	MA0102.2	0.295
MA0103.1	MA0103.1	0.747
MA0104.2	MA0104.2	0.11
MA0105.1	MA0105.1	0.0299
MA0106.1	MA0106.1	0.00605
MA0107.1	MA0107.1	0.385
MA0108.2	MA0108.2	0.0117
MA0111.1	MA0111.1	0.557
MA0112.2	MA0112.2	6.43814e-5
MA0113.1	MA0113.1	0.15
MA0114.1	MA0114.1	0.772
MA0115.1	MA0115.1	0.592
MA0116.1	MA0116.1	0.0153
MA0117.1	MA0117.1	0.994
MA0119.1	MA0119.1	0.0363
MA0122.1	MA0122.1	0.0759
MA0124.1	MA0124.1	0.615
MA0125.1	MA0125.1	0.491
MA0131.1	MA0131.1	0.434
MA0135.1	MA0135.1	0.0298
MA0136.1	MA0136.1	2.98373e-9
MA0137.2	MA0137.2	0.443
MA0138.2	MA0138.2	0.515
MA0139.1	MA0139.1	0.905
MA0140.1	MA0140.1	0.757
MA0141.1	MA0141.1	0.357
MA0142.1	MA0142.1	0.579
MA0143.1	MA0143.1	0.12
MA0144.1	MA0144.1	0.772
MA0145.1	MA0145.1	0.125
MA0146.1	MA0146.1	0.808
MA0147.1	MA0147.1	0.606
MA0148.1	MA0148.1	0.697
MA0149.1	MA0149.1	0.149
MA0150.1	MA0150.1	0.609
MA0152.1	MA0152.1	0.00585
MA0153.1	MA0153.1	0.324
MA0154.1	MA0154.1	0.0173
MA0155.1	MA0155.1	0.376
MA0156.1	MA0156.1	9.91965e-6
MA0157.1	MA0157.1	0.714
MA0159.1	MA0159.1	0.166
MA0160.1	MA0160.1	0.924
MA0162.1	MA0162.1	0.0457
MA0163.1	MA0163.1	6.27336e-5
MA0164.1	MA0164.1	0.594
MA0258.1	MA0258.1	0.00506
MA0259.1	MA0259.1	0.843

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10851

Novel motif	Logo	P-value
1	1	0.124
10	10	0.638
100	100	0.696
101	101	0.735
102	102	0.126
103	103	0.082
104	104	0.791
105	105	0.806
106	106	0.0231
107	107	0.0267
108	108	0.373
109	109	0.157
11	11	0.285
110	110	0.246
111	111	0.973
112	112	0.468
113	113	0.194
114	114	0.0927
115	115	0.368
116	116	0.0719
117	117	0.739
118	118	0.972
119	119	0.263
12	12	0.362
120	120	0.901
121	121	0.817
122	122	0.504
123	123	0.158
124	124	0.532
125	125	0.768
126	126	0.983
127	127	0.895
128	128	0.0476
129	129	0.385
13	13	0.677
130	130	0.384
131	131	0.0723
132	132	0.716
133	133	0.789
134	134	0.12
135	135	0.146
136	136	0.508
137	137	0.653
138	138	0.581
139	139	0.566
14	14	0.866
140	140	0.442
141	141	0.539
142	142	0.584
143	143	0.048
144	144	0.705
145	145	0.362
146	146	0.584
147	147	0.183
148	148	0.445
149	149	1.6355e-4
15	15	0.175
150	150	0.383
151	151	0.415
152	152	0.122
153	153	0.158
154	154	0.86
155	155	0.216
156	156	0.46
157	157	0.888
158	158	0.0771
159	159	0.411
16	16	0.026
160	160	0.141
161	161	0.245
162	162	0.83
163	163	0.514
164	164	0.212
165	165	0.992
166	166	0.0733
167	167	0.566
168	168	0.859
169	169	0.0339
17	17	0.22
18	18	0.0435
19	19	0.0356
2	2	0.144
20	20	0.327
21	21	0.148
22	22	0.191
23	23	0.0204
24	24	0.673
25	25	0.798
26	26	0.0933
27	27	0.158
28	28	0.436
29	29	0.723
3	3	0.251
30	30	0.402
31	31	0.521
32	32	1.0594e-11
33	33	0.435
34	34	0.604
35	35	0.214
36	36	0.401
37	37	0.211
38	38	0.83
39	39	0.213
4	4	0.949
40	40	0.749
41	41	0.407
42	42	0.513
43	43	0.302
44	44	0.681
45	45	0.433
46	46	0.0637
47	47	0.443
48	48	0.471
49	49	0.297
5	5	0.307
50	50	0.534
51	51	0.916
52	52	0.132
53	53	0.871
54	54	0.532
55	55	0.0934
56	56	0.782
57	57	0.269
58	58	0.789
59	59	0.0752
6	6	0.643
60	60	0.112
61	61	0.521
62	62	0.192
63	63	0.179
64	64	0.557
65	65	0.227
66	66	0.99
67	67	0.123
68	68	0.974
69	69	0.445
7	7	0.921
70	70	0.104
71	71	0.0742
72	72	0.714
73	73	0.251
74	74	0.00924
75	75	0.325
76	76	0.755
77	77	0.00838
78	78	0.532
79	79	0.0112
8	8	0.0467
80	80	0.754
81	81	0.27
82	82	0.24
83	83	0.4
84	84	0.975
85	85	0.0355
86	86	0.519
87	87	0.797
88	88	0.456
89	89	0.046
9	9	0.387
90	90	0.171
91	91	0.53
92	92	0.124
93	93	0.516
94	94	0.152
95	95	0.452
96	96	0.318
97	97	0.171
98	98	0.888
99	99	0.00427

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10851

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000161 human sertoli cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000511 (androgen binding protein secreting cell)
0000630 (supportive cell)
0002625 (seminiferous tubule epithelial cell)
0000154 (protein secreting cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)
0000216 (Sertoli cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000473 (testis)
0001136 (mesothelium)
0000483 (epithelium)
0000991 (gonad)
0001343 (seminiferous tubule of testis)
0000479 (tissue)
0000058 (duct)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0003133 (reproductive organ)
0005904 (duct of male reproductive system)
0000487 (simple squamous epithelium)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0004910 (epithelium of male gonad)
0004909 (epithelium of gonad)
0004813 (seminiferous tubule epithelium)
0003101 (male organism)
0000079 (male reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000161 (human sertoli cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000222 (mesodermal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000058,UBERON:0000061,UBERON:0000062,UBERON:0000079,UBERON:0000119,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000473,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000483,UBERON:0000487,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0000991,UBERON:0001048,UBERON:0001062,UBERON:0001136,UBERON:0001343,UBERON:0002050,UBERON:0002323,UBERON:0002532,UBERON:0002553,UBERON:0003101,UBERON:0003133,UBERON:0003135,UBERON:0004111,UBERON:0004120,UBERON:0004176,UBERON:0004458,UBERON:0004813,UBERON:0004909,UBERON:0004910,UBERON:0005156,UBERON:0005423,UBERON:0005564,UBERON:0005904,UBERON:0006914,UBERON:0009117,UBERON:0009196
+|DRA_sample_Accession=CAGE@SAMD00005843
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000076,CL:0000077,CL:0000144,CL:0000151,CL:0000154,CL:0000213,CL:0000215,CL:0000216,CL:0000220,CL:0000222,CL:0000255,CL:0000511,CL:0000548,CL:0000630,CL:0002321,CL:0002625
+|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005843
+|accession_numbers=CAGE;DRX008450;DRR009322;DRZ000747;DRZ002132;DRZ012097;DRZ013482
+|accession_numbers_RNASeq=sRNA-Seq;DRX037025;DRR041391;DRZ007033
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000473,UBERON:0001136,UBERON:0000483,UBERON:0000991,UBERON:0001343,UBERON:0000479,UBERON:0000058,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0003133,UBERON:0005904,UBERON:0000487,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0004910,UBERON:0004909,UBERON:0004813,UBERON:0003101,UBERON:0000079
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000511,CL:0000630,CL:0002625,CL:0000154,CL:0000255,CL:0000077,CL:0000216
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000161
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr1:197886461..197886558,+!p1@LHX9!2.47!294.05!LHX9;;chr8:11561684..11561751,+!p1@GATA4!1.73!53.03!GATA4;;chr6:134210243..134210257,+!p1@TCF21!1.71!49.81!TCF21;;chr2:19558373..19558392,-!p1@OSR1!1.64!112.48!OSR1;;chr11:46299199..46299233,+!p1@CREB3L1!1.51!157.47!CREB3L1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.43!25.71!HOXC5;;chr11:61520075..61520136,+!p1@C11orf9!1.34!43.38!C11orf9;;chr1:170633348..170633399,+!p2@PRRX1!1.27!24.10!PRRX1;;chr11:46299539..46299620,+!p2@CREB3L1!1.24!27.32!CREB3L1;;chr5:139492456..139492489,+!p7@PURA!1.23!16.07!PURA;;chr8:72756637..72756664,-!p3@MSC!1.22!17.68!MSC;;chr18:53068911..53068935,-!p4@TCF4!1.14!14.46!TCF4;;chr14:62162258..62162269,+!p2@HIF1A!1.10!110.87!HIF1A;;chr5:72744445..72744466,-!p2@FOXD1!1.10!19.28!FOXD1;;chr11:46299186..46299195,+!p3@CREB3L1!1.10!12.85!CREB3L1;;chr18:19749386..19749404,+!p2@GATA6!1.09!16.07!GATA6;;chr1:170632285..170632309,+!p1@PRRX1!1.09!12.85!PRRX1;;chr3:25470156..25470227,+!p2@RARB!1.09!11.25!RARB;;chr9:127269661..127269719,-!p1@NR5A1!1.09!11.25!NR5A1;;chr8:72756667..72756736,-!p2@MSC!1.05!16.07!MSC;;chr1:170632959..170632987,+!p4@PRRX1!1.05!11.25!PRRX1;;chr8:72756267..72756296,-!p4@MSC!1.03!14.46!MSC;;chr1:170633262..170633285,+!p3@PRRX1!1.03!11.25!PRRX1;;chr19:46801639..46801699,+!p1@HIF3A!1.03!9.64!HIF3A;;chr16:31076332..31076388,-!p3@ZNF668!1.03!9.64!ZNF668;;chr7:1577899..1577943,+!p3@MAFK!1.03!9.64!MAFK;;chr2:177053386..177053402,+!p1@HOXD1!1.03!9.64!HOXD1;;chr14:62162285..62162296,+!p3@HIF1A!1.02!49.81!HIF1A;;chr17:1959369..1959388,+!p2@HIC1!1.00!24.10!HIC1;;chr10:63809013..63809041,+!p3@ARID5B!0.99!49.81!ARID5B;;chr15:96869255..96869291,+!p6@NR2F2!0.99!16.07!NR2F2;;chr8:72756063..72756125,-!p1@MSC!0.98!17.68!MSC;;chr16:67881588..67881612,-!p2@CENPT!0.96!11.25!CENPT;;chr2:176994408..176994492,+!p1@HOXD8!0.96!8.03!HOXD8;;chr2:177001290..177001315,+!p1@HOXD3!0.96!8.03!HOXD3;;chr3:25469815..25469866,+!p3@RARB!0.96!8.03!RARB;;chrY:21906594..21906622,-!p1@KDM5D!0.96!8.03!KDM5D;;chr1:197886665..197886732,+!p3@LHX9!0.96!8.03!LHX9;;chr8:55370487..55370503,+!p1@SOX17!0.96!8.03!SOX17;;chr12:54402745..54402788,+!p1@HOXC8!0.96!8.03!HOXC8;;chr18:19749541..19749557,+!p1@GATA6!0.95!25.71!GATA6;;chr3:141105705..141105770,+!p4@ZBTB38!0.95!9.64!ZBTB38;;chr8:106330656..106330684,+!p1@ZFPM2!0.94!20.89!ZFPM2;;chr19:13136130..13136165,+!p6@NFIX!0.91!9.64!NFIX;;chr1:23696348..23696363,-!p4@ZNF436!0.91!8.03!ZNF436;;chr17:1958388..1958404,+!p1@HIC1!0.90!46.60!HIC1;;chr5:92918919..92918942,+!p1@NR2F1!0.90!32.14!NR2F1;;chr18:3450293..3450304,+!p4@TGIF1!0.90!17.68!TGIF1;;chr12:80085061..80085119,-!p6@PAWR!0.90!11.25!PAWR;;chr2:239756671..239756732,+!p1@TWIST2!0.89!22.50!TWIST2;;chr2:176994919..176994931,+!p2@HOXD8!0.87!6.43!HOXD8;;chr9:16705069..16705086,-!p3@BNC2!0.87!6.43!BNC2;;chr8:11534462..11534475,+!p6@GATA4!0.87!6.43!GATA4;;chr12:80085120..80085156,-!p14@PAWR!0.87!6.43!PAWR;;chr19:47523058..47523114,+!p1@NPAS1!0.87!6.43!NPAS1;;chr5:158526917..158526932,-!p1@EBF1!0.85!16.07!EBF1;;chr15:42749722..42749739,-!p2@ZFP106!0.85!11.25!ZFP106;;chr18:19749517..19749531,+!p3@GATA6!0.85!11.25!GATA6;;chr8:72756213..72756243,-!p5@MSC!0.85!8.03!MSC;;chr19:45260775..45260838,+!p5@BCL3!0.85!8.03!BCL3;;chr1:158979872..158979898,+!p3@IFI16!0.84!19.28!IFI16;;chr1:8938709..8938720,-!p3@ENO1!0.83!298.87!ENO1;;chr14:62203595..62203676,+!p4@HIF1A!0.83!11.25!HIF1A;;chr10:63808979..63808990,+!p8@ARID5B!0.83!6.43!ARID5B;;chr10:63853436..63853442,+!p4@ARID5B!0.82!32.14!ARID5B;;chr1:158969752..158969780,+!p6@IFI16!0.80!9.64!IFI16;;chr10:63809106..63809127,+!p1@ARID5B!0.79!75.52!ARID5B;;chr8:106330696..106330719,+!p2@ZFPM2!0.77!6.43!ZFPM2;;chr6:19837592..19837621,+!p1@ID4!0.76!32.14!ID4;;chr2:121493425..121493474,+!p1@GLI2!0.76!11.25!GLI2;;chr15:96874145..96874166,+!p7@NR2F2!0.76!9.64!NR2F2;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.76!4.82!SEBOX;;chr18:53068940..53068951,-!p21@TCF4!0.76!4.82!TCF4;;chr2:176973498..176973524,+!p1@HOXD10!0.76!4.82!HOXD10;;chr4:174450089..174450153,-!p2@HAND2!0.76!4.82!HAND2;;chrY:2803415..2803468,+!p1@ZFY!0.76!4.82!ZFY;;chr8:11534438..11534451,+!p3@GATA4!0.76!4.82!GATA4;;chr8:72756380..72756427,-!p8@MSC!0.76!4.82!MSC;;chr8:93074848..93074871,-!p3@RUNX1T1!0.76!4.82!RUNX1T1;;chr11:46333934..46333963,+!p5@CREB3L1!0.76!4.82!CREB3L1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.76!4.82!HOXC5;;chr1:170632723..170632739,+!p8@PRRX1!0.76!4.82!PRRX1;;chr12:124873357..124873401,-!p1@NCOR2!0.74!57.85!NCOR2;;chr2:239756739..239756755,+!p2@TWIST2!0.74!8.03!TWIST2;;chr5:92918956..92918969,+!p4@NR2F1!0.73!4.82!NR2F1;;chr15:96869292..96869320,+!p15@NR2F2!0.72!6.43!NR2F2;;chr9:4300050..4300118,-!p1@GLIS3!0.71!30.53!GLIS3;;chr9:35732647..35732678,+!p2@CREB3!0.71!25.71!CREB3;;chr11:65686732..65686756,+!p2@DRAP1!0.71!19.28!DRAP1;;chr19:13134772..13134822,+!p2@NFIX!0.71!6.43!NFIX;;chr15:96869222..96869251,+!p18@NR2F2!0.70!4.82!NR2F2;;chr3:71007344..71007348,-!p6@FOXP1!0.69!17.68!FOXP1;;chr11:62369383..62369399,-!p6@MTA2!0.69!9.64!MTA2;;chr19:31840130..31840160,-!p2@TSHZ3!0.69!6.43!TSHZ3;;chr14:62162224..62162254,+!p1@HIF1A!0.68!637.92!HIF1A;;chr19:45251943..45252006,+!p1@BCL3!0.68!114.09!BCL3;;chr7:44143925..44143970,+!p1@AEBP1!0.68!98.02!AEBP1;;chr6:144289132..144289134,-!p3@PLAGL1!0.68!9.64!PLAGL1;;chr21:36260343..36260402,-!p6@RUNX1!0.68!6.43!RUNX1;;chr1:23696448..23696453,-!p5@ZNF436!0.68!4.82!ZNF436;;chr6:85473156..85473210,-!p2@TBX18!0.68!4.82!TBX18;;chr19:47922750..47922795,-!p1@MEIS3!0.67!6.43!MEIS3;;chr7:44143997..44144008,+!p3@AEBP1!0.67!4.82!AEBP1;;chr9:117150303..117150312,-!p3@AKNA!0.67!4.82!AKNA;;chr11:12696002..12696022,+!p2@TEAD1!0.66!9.64!TEAD1;;chr2:121493492..121493537,+!p2@GLI2!0.66!6.43!GLI2;;chr12:80084137..80084165,-!p10@PAWR!0.66!4.82!PAWR;;chr14:62213758..62213774,+!p8@HIF1A!0.66!4.82!HIF1A;;chr19:18391615..18391637,-!p5@JUND!0.66!4.82!JUND;;chr6:126102292..126102329,+!p3@NCOA7!0.65!12.85!NCOA7;;chr8:48650982..48651023,-!p3@CEBPD!0.65!9.64!CEBPD;;chr1:23696308..23696339,-!p2@ZNF436!0.65!8.03!ZNF436;;chr17:59477197..59477212,+!p2@TBX2!0.65!6.43!TBX2;;chr17:42295897..42295953,-!p10@UBTF!0.65!4.82!UBTF;;chr5:158526459..158526481,-!p2@EBF1!0.65!4.82!EBF1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.64!35.35!PPP1R13L;;chr3:37217736..37217753,-!p2@LRRFIP2!0.64!16.07!LRRFIP2;;chr10:63809077..63809089,+!p5@ARID5B!0.64!8.03!ARID5B;;chr1:8924055..8924074,-!p9@ENO1!0.64!6.43!ENO1;;chr12:26277817..26277863,-!p2@BHLHE41!0.64!4.82!BHLHE41;;chr11:65667884..65667895,-!p2@FOSL1!0.63!14.46!FOSL1;;chr12:3069037..3069119,+!p2@TEAD4!0.63!12.85!TEAD4;;chr12:104531785..104531812,-!p3@NFYB!0.63!9.64!NFYB;;chr10:77161650..77161661,-!p4@ZNF503!0.63!4.82!ZNF503;;chr17:46127997..46128015,+!p5@NFE2L1!0.63!4.82!NFE2L1;;chr1:23885981..23886002,-!p1@ID3!0.62!673.27!ID3;;chr14:62213827..62213853,+!p6@HIF1A!0.62!4.82!HIF1A;;chr11:125034586..125034604,+!p3@PKNOX2!0.62!3.21!PKNOX2;;chr11:125034605..125034636,+!p2@PKNOX2!0.62!3.21!PKNOX2;;chr11:2292226..2292270,-!p1@ASCL2!0.62!3.21!ASCL2;;chr11:46299443..46299459,+!p4@CREB3L1!0.62!3.21!CREB3L1;;chr12:54394309..54394336,+!p2@HOXC9!0.62!3.21!HOXC9;;chr14:37131058..37131139,+!p1@PAX9!0.62!3.21!PAX9;;chr1:197886421..197886432,+!p2@LHX9!0.62!3.21!LHX9;;chr1:197886617..197886628,+!p8@LHX9!0.62!3.21!LHX9;;chr1:197886646..197886657,+!p5@LHX9!0.62!3.21!LHX9;;chr1:197886772..197886790,+!p4@LHX9!0.62!3.21!LHX9;;chr1:201979703..201979721,+!p2@ELF3!0.62!3.21!ELF3;;chr9:16727880..16727894,-!p10@BNC2!0.62!3.21!BNC2;;chr9:16727949..16727965,-!p14@BNC2!0.62!3.21!BNC2;;chr9:16727978..16728010,-!p6@BNC2!0.62!3.21!BNC2;;chr15:67430381..67430396,+!p21@SMAD3!0.62!3.21!SMAD3;;chr15:80843484..80843499,+!p5@ARNT2!0.62!3.21!ARNT2;;chr18:53070913..53070933,-!p16@TCF4!0.62!3.21!TCF4;;chr19:13135386..13135435,+!p4@NFIX!0.62!3.21!NFIX;;chr19:13135832..13135853,+!p16@NFIX!0.62!3.21!NFIX;;chr19:13136057..13136085,+!p11@NFIX!0.62!3.21!NFIX;;chr2:176981499..176981522,+!p2@HOXD10!0.62!3.21!HOXD10;;chr2:176987463..176987479,+!p2@HOXD9!0.62!3.21!HOXD9;;chr2:176987485..176987496,+!p3@HOXD9!0.62!3.21!HOXD9;;chr2:19558327..19558334,-!p2@OSR1!0.62!3.21!OSR1;;chr2:46612891..46612907,+!p10@EPAS1!0.62!3.21!EPAS1;;chr3:141087562..141087594,+!p12@ZBTB38!0.62!3.21!ZBTB38;;chr5:158523468..158523481,-!p20@EBF1!0.62!3.21!EBF1;;chr6:85473227..85473243,-!p5@TBX18!0.62!3.21!TBX18;;chr7:1577076..1577095,+!p5@MAFK!0.62!3.21!MAFK;;chr8:11534521..11534533,+!p4@GATA4!0.62!3.21!GATA4;;chr8:25902876..25902936,-!p1@EBF2!0.62!3.21!EBF2;;chr8:72755987..72756002,-!p7@MSC!0.62!3.21!MSC;;chr8:93115584..93115642,-!p5@RUNX1T1!0.62!3.21!RUNX1T1;;chr9:100615499..100615519,+!p1@FOXE1!0.62!3.21!FOXE1;;chr10:63809134..63809145,+!p6@ARID5B!0.61!8.03!ARID5B;;chr2:166326200..166326216,+!p1@CSRNP3!0.61!4.82!CSRNP3;;chr2:238600933..238600985,+!p3@LRRFIP1!0.60!19.28!LRRFIP1;;chr19:13106214..13106382,+!p1@NFIX!0.59!81.95!NFIX;;chr19:45252008..45252024,+!p2@BCL3!0.59!11.25!BCL3;;chr20:42543506..42543549,+!p2@TOX2!0.59!8.03!TOX2;;chr3:141121847..141121868,+!p5@ZBTB38!0.59!4.82!ZBTB38;;chr5:92919375..92919438,+!p6@NR2F1!0.59!3.21!NR2F1;;chrX:128657457..128657475,-!p1@SMARCA1!0.58!40.17!SMARCA1;;chr22:38598086..38598105,+!p1@MAFF!0.58!36.96!MAFF;;chr2:66662281..66662308,+!p1@MEIS1!0.57!11.25!MEIS1;;chr3:187463220..187463232,-!p3@BCL6!0.57!9.64!BCL6;;chr8:145159324..145159333,+!p5@MAF1!0.57!6.43!MAF1;;chr2:101591314..101591333,+!p2@NPAS2!0.57!3.21!NPAS2;;chr3:71631382..71631413,-!p20@FOXP1!0.57!3.21!FOXP1;;chr19:16435625..16435682,+!p1@KLF2!0.56!107.66!KLF2;;chr2:208030647..208030689,-!p1@KLF7!0.56!27.32!KLF7;;chr15:96873984..96873999,+!p3@NR2F2!0.56!24.10!NR2F2;;chr20:42543441..42543497,+!p1@TOX2!0.56!14.46!TOX2;;chr2:178129358..178129403,-!p5@NFE2L2!0.56!12.85!NFE2L2;;chr15:96874927..96874938,+!p8@NR2F2!0.56!6.43!NR2F2;;chr17:7492684..7492778,-!p2@SOX15!0.56!6.43!SOX15;;chr19:17356189..17356221,-!p2@NR2F6!0.56!4.82!NR2F6;;chr20:48807615..48807644,+!p6@CEBPB!0.56!4.82!CEBPB;;chr9:14082760..14082775,-!p6@NFIB!0.56!4.82!NFIB;;chr3:107244229..107244254,+!p3@BBX!0.56!4.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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000154;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000630;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000079;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000487;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003135;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004871;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004876;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0006914
+|ffid_belonging_in_development=CL:0000222
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 44: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Sertoli%2520Cells%252c%2520donor1.CNhs10851.11255-116F4.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Sertoli%2520Cells%252c%2520donor1.CNhs10851.11255-116F4.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Sertoli%2520Cells%252c%2520donor1.CNhs10851.11255-116F4.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Sertoli%2520Cells%252c%2520donor1.CNhs10851.11255-116F4.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Sertoli%2520Cells%252c%2520donor1.CNhs10851.11255-116F4.hg38.nobarcode.ctss.bed.gz
 |id=FF:11255-116F4
-|is_a=EFO:0002091;;FF:0000002;;FF:0000161;;FF:0000210
+|is_a=EFO:0002091;;FF:0000161
+|is_obsolete=
+|library_id=CNhs10851
+|library_id_phase_based=2:CNhs10851
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11255
+|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10003.GTAGAG.11255
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11255
+|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10003.GTAGAG.11255
 |name=Sertoli Cells, donor1
 |namespace=FANTOM5
@@ Line 42: / Line 65: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs10851,LSID700,release009,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=SRhi10003,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=116
 |rna_catalog_number=N/A
@@ Line 56: / Line 82: @@
 |rna_tube_id=116F4
 |rna_weight_ug=21.4
+|rnaseq_library_id=SRhi10003.GTAGAG
 |sample_age=23
+|sample_category=primary cells
 |sample_cell_catalog=MM-HSE-2305
 |sample_cell_line=
@@ Line 69: / Line 97: @@
 |sample_ethnicity=C
 |sample_experimental_condition=
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process;1.14147795236839e-56!GO:0005739;mitochondrion;1.89891398306399e-55!GO:0003723;RNA binding;4.03728157655713e-54!GO:0019538;protein metabolic process;9.3610628789041e-54!GO:0044428;nuclear part;3.26415200337211e-52!GO:0044260;cellular macromolecule metabolic process;2.07321296844339e-48!GO:0043234;protein complex;2.32887306950949e-47!GO:0044267;cellular protein metabolic process;5.24775446473489e-47!GO:0005840;ribosome;1.27049061955155e-46!GO:0031090;organelle membrane;7.0434277165949e-46!GO:0006412;translation;3.04733719168332e-45!GO:0016043;cellular component organization and biogenesis;2.92729170503481e-42!GO:0003735;structural constituent of ribosome;2.88563877106133e-41!GO:0015031;protein transport;3.85948935972741e-40!GO:0005829;cytosol;3.85948935972741e-40!GO:0033036;macromolecule localization;8.73208926658904e-40!GO:0045184;establishment of protein localization;9.78338683253782e-38!GO:0009058;biosynthetic process;2.06767645414307e-37!GO:0044429;mitochondrial part;4.78817313959023e-37!GO:0008104;protein localization;6.54833203012018e-37!GO:0044249;cellular biosynthetic process;1.52595760536205e-36!GO:0033279;ribosomal subunit;2.7807445648432e-36!GO:0005634;nucleus;3.18019600175795e-36!GO:0009059;macromolecule biosynthetic process;9.08142132325973e-36!GO:0006396;RNA processing;1.69769465386736e-35!GO:0046907;intracellular transport;5.69011276238877e-34!GO:0031981;nuclear lumen;1.445309525258e-32!GO:0016071;mRNA metabolic process;2.06968307246068e-32!GO:0031967;organelle envelope;3.17503553904106e-32!GO:0031975;envelope;6.23127041241742e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.21130853507849e-28!GO:0006397;mRNA processing;8.21130853507849e-28!GO:0043228;non-membrane-bound organelle;1.71875483010747e-27!GO:0043232;intracellular non-membrane-bound organelle;1.71875483010747e-27!GO:0065003;macromolecular complex assembly;2.30724883065662e-27!GO:0008380;RNA splicing;3.7065911154456e-27!GO:0006886;intracellular protein transport;1.26408650226472e-26!GO:0006996;organelle organization and biogenesis;7.23343458891827e-25!GO:0022607;cellular component assembly;6.58665354918221e-24!GO:0005783;endoplasmic reticulum;6.86649035689839e-24!GO:0005740;mitochondrial envelope;1.22583430683292e-23!GO:0044445;cytosolic part;1.75884625073858e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.41749761969043e-23!GO:0031966;mitochondrial membrane;1.73655380375869e-22!GO:0006457;protein folding;4.40039236329811e-22!GO:0051641;cellular localization;5.94604715910592e-22!GO:0051649;establishment of cellular localization;6.81789744817677e-22!GO:0019866;organelle inner membrane;1.04402316042619e-21!GO:0012505;endomembrane system;2.59354345017973e-21!GO:0043283;biopolymer metabolic process;4.66014304265211e-21!GO:0000166;nucleotide binding;5.63389300931783e-21!GO:0005654;nucleoplasm;1.28932413379806e-20!GO:0005794;Golgi apparatus;2.22181378330828e-20!GO:0006119;oxidative phosphorylation;2.5363139717866e-20!GO:0005743;mitochondrial inner membrane;3.81173455106377e-20!GO:0005681;spliceosome;6.88377345579563e-20!GO:0048770;pigment granule;1.02777135443755e-19!GO:0042470;melanosome;1.02777135443755e-19!GO:0016462;pyrophosphatase activity;1.07181947530437e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.62865501934228e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;2.12319346887952e-19!GO:0017111;nucleoside-triphosphatase activity;2.1658523345236e-19!GO:0015935;small ribosomal subunit;8.1171874978277e-19!GO:0015934;large ribosomal subunit;2.09324630765731e-18!GO:0007049;cell cycle;4.74223079798197e-18!GO:0044455;mitochondrial membrane part;7.15855663222442e-18!GO:0044432;endoplasmic reticulum part;7.22825014709616e-18!GO:0010467;gene expression;2.98804786053981e-17!GO:0044451;nucleoplasm part;8.07176879378107e-17!GO:0006259;DNA metabolic process;2.01335059326989e-16!GO:0022618;protein-RNA complex assembly;3.35177758928568e-16!GO:0031980;mitochondrial lumen;4.36369964007828e-16!GO:0005759;mitochondrial matrix;4.36369964007828e-16!GO:0008134;transcription factor binding;6.01656647487897e-16!GO:0048193;Golgi vesicle transport;6.74530111430853e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.61520503399938e-15!GO:0005746;mitochondrial respiratory chain;1.67740264424457e-15!GO:0017076;purine nucleotide binding;1.95792841175772e-15!GO:0032553;ribonucleotide binding;3.31717033106509e-15!GO:0032555;purine ribonucleotide binding;3.31717033106509e-15!GO:0044265;cellular macromolecule catabolic process;6.19548037721227e-15!GO:0006512;ubiquitin cycle;9.31015407867832e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.18100069539674e-14!GO:0016874;ligase activity;1.25213427950278e-14!GO:0051186;cofactor metabolic process;2.08986884558334e-14!GO:0008135;translation factor activity, nucleic acid binding;2.32411708242274e-14!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.18421339906524e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.22276322598214e-14!GO:0051082;unfolded protein binding;6.72719431533537e-14!GO:0022402;cell cycle process;8.16048981909413e-14!GO:0016192;vesicle-mediated transport;9.56601345875459e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.0981072127465e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.62335890415693e-13!GO:0003954;NADH dehydrogenase activity;2.62335890415693e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.62335890415693e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;2.62602815760076e-13!GO:0043285;biopolymer catabolic process;3.00505670231274e-13!GO:0044248;cellular catabolic process;3.6806147520313e-13!GO:0009057;macromolecule catabolic process;4.80053795911086e-13!GO:0000278;mitotic cell cycle;4.8539112825966e-13!GO:0019941;modification-dependent protein catabolic process;4.88438389534044e-13!GO:0043632;modification-dependent macromolecule catabolic process;4.88438389534044e-13!GO:0006511;ubiquitin-dependent protein catabolic process;5.78982859058812e-13!GO:0006605;protein targeting;6.07977199130526e-13!GO:0044257;cellular protein catabolic process;6.07977199130526e-13!GO:0005761;mitochondrial ribosome;1.09517827327302e-12!GO:0000313;organellar ribosome;1.09517827327302e-12!GO:0005730;nucleolus;2.08353868719784e-12!GO:0030554;adenyl nucleotide binding;2.24454517262345e-12!GO:0005793;ER-Golgi intermediate compartment;2.427046906356e-12!GO:0032559;adenyl ribonucleotide binding;2.65554338899611e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.70653429092474e-12!GO:0005524;ATP binding;3.08475099643729e-12!GO:0043412;biopolymer modification;4.5967555935913e-12!GO:0005789;endoplasmic reticulum membrane;9.60400392223098e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.17634109990813e-11!GO:0042773;ATP synthesis coupled electron transport;1.17634109990813e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.21170754926018e-11!GO:0012501;programmed cell death;1.44713103732794e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.72600842739098e-11!GO:0045271;respiratory chain complex I;1.72600842739098e-11!GO:0005747;mitochondrial respiratory chain complex I;1.72600842739098e-11!GO:0003743;translation initiation factor activity;1.81836162321258e-11!GO:0006732;coenzyme metabolic process;1.8260668156182e-11!GO:0006915;apoptosis;2.59474697321683e-11!GO:0030163;protein catabolic process;3.30310883511899e-11!GO:0006464;protein modification process;4.48899506000292e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.96158066998366e-11!GO:0003712;transcription cofactor activity;8.14669953545069e-11!GO:0006413;translational initiation;8.95488937894833e-11!GO:0009055;electron carrier activity;8.95488937894833e-11!GO:0016887;ATPase activity;1.1691253808072e-10!GO:0048523;negative regulation of cellular process;2.05059597559513e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;2.23446917371913e-10!GO:0000375;RNA splicing, via transesterification reactions;2.23446917371913e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.23446917371913e-10!GO:0042623;ATPase activity, coupled;3.31164426731642e-10!GO:0008219;cell death;4.48200979573958e-10!GO:0016265;death;4.48200979573958e-10!GO:0016491;oxidoreductase activity;1.17754480023471e-09!GO:0006913;nucleocytoplasmic transport;1.26559899093229e-09!GO:0009259;ribonucleotide metabolic process;1.49047885603258e-09!GO:0043687;post-translational protein modification;1.93380646441365e-09!GO:0000087;M phase of mitotic cell cycle;2.01839269200851e-09!GO:0006446;regulation of translational initiation;2.16742467404891e-09!GO:0051726;regulation of cell cycle;2.20646750747304e-09!GO:0007067;mitosis;2.30660472508333e-09!GO:0005635;nuclear envelope;2.57018001208094e-09!GO:0051169;nuclear transport;2.57018001208094e-09!GO:0000074;regulation of progression through cell cycle;2.71687229142936e-09!GO:0031965;nuclear membrane;3.79259693016756e-09!GO:0009150;purine ribonucleotide metabolic process;4.41521558867291e-09!GO:0006974;response to DNA damage stimulus;4.41521558867291e-09!GO:0006163;purine nucleotide metabolic process;6.08111689171436e-09!GO:0008565;protein transporter activity;6.18455137607425e-09!GO:0016604;nuclear body;6.35477631653981e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.62251191163565e-09!GO:0048519;negative regulation of biological process;6.62671028248404e-09!GO:0005788;endoplasmic reticulum lumen;6.6655804445098e-09!GO:0016023;cytoplasmic membrane-bound vesicle;7.8603830716376e-09!GO:0031988;membrane-bound vesicle;7.95405329513625e-09!GO:0006888;ER to Golgi vesicle-mediated transport;1.21426592667316e-08!GO:0009260;ribonucleotide biosynthetic process;1.35647461722477e-08!GO:0008639;small protein conjugating enzyme activity;1.48798303853771e-08!GO:0051301;cell division;1.57994859052299e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.58907777998699e-08!GO:0006461;protein complex assembly;1.82166956951393e-08!GO:0030120;vesicle coat;2.09089877355808e-08!GO:0030662;coated vesicle membrane;2.09089877355808e-08!GO:0006164;purine nucleotide biosynthetic process;2.29660117863321e-08!GO:0009060;aerobic respiration;2.32099882295919e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.52013229121959e-08!GO:0004842;ubiquitin-protein ligase activity;2.74206806047363e-08!GO:0009141;nucleoside triphosphate metabolic process;3.67996276304444e-08!GO:0009199;ribonucleoside triphosphate metabolic process;3.67996276304444e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.1273319355267e-08!GO:0019787;small conjugating protein ligase activity;4.36800191012723e-08!GO:0042254;ribosome biogenesis and assembly;4.69283418176791e-08!GO:0044453;nuclear membrane part;4.72426733472912e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.05675521183336e-08!GO:0009144;purine nucleoside triphosphate metabolic process;5.05675521183336e-08!GO:0015986;ATP synthesis coupled proton transport;5.28956857088897e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.28956857088897e-08!GO:0045333;cellular respiration;5.38024913834207e-08!GO:0044431;Golgi apparatus part;5.94966333118614e-08!GO:0009056;catabolic process;6.37307676978579e-08!GO:0005694;chromosome;6.40338058209932e-08!GO:0022403;cell cycle phase;8.57616760466003e-08!GO:0019829;cation-transporting ATPase activity;9.62219488781117e-08!GO:0003924;GTPase activity;9.71780052828491e-08!GO:0046034;ATP metabolic process;1.1093726818552e-07!GO:0008026;ATP-dependent helicase activity;1.12799918149478e-07!GO:0048475;coated membrane;1.15235584061987e-07!GO:0030117;membrane coat;1.15235584061987e-07!GO:0043069;negative regulation of programmed cell death;1.28196573271163e-07!GO:0051276;chromosome organization and biogenesis;1.36119597267532e-07!GO:0043067;regulation of programmed cell death;1.90928827229305e-07!GO:0042981;regulation of apoptosis;1.95608938696608e-07!GO:0051246;regulation of protein metabolic process;1.98317603068477e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.01910928089561e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.01910928089561e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.12566463625416e-07!GO:0043066;negative regulation of apoptosis;2.37626364598086e-07!GO:0051187;cofactor catabolic process;2.56621971433467e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.78108576822978e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.78108576822978e-07!GO:0016607;nuclear speck;2.99175512594795e-07!GO:0004386;helicase activity;3.01238062573685e-07!GO:0005768;endosome;3.11533103104508e-07!GO:0044427;chromosomal part;3.11533103104508e-07!GO:0016787;hydrolase activity;3.14858596089936e-07!GO:0017038;protein import;3.29841556504269e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.34996364598487e-07!GO:0016881;acid-amino acid ligase activity;3.45033982396052e-07!GO:0006091;generation of precursor metabolites and energy;3.8092753894815e-07!GO:0031982;vesicle;3.8092753894815e-07!GO:0006399;tRNA metabolic process;4.08951114451237e-07!GO:0006099;tricarboxylic acid cycle;4.758820894617e-07!GO:0046356;acetyl-CoA catabolic process;4.758820894617e-07!GO:0031410;cytoplasmic vesicle;4.80649036517751e-07!GO:0006754;ATP biosynthetic process;4.93230325406421e-07!GO:0006753;nucleoside phosphate metabolic process;4.93230325406421e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;5.45521741436085e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.48385476248664e-07!GO:0006281;DNA repair;5.71461827213192e-07!GO:0015078;hydrogen ion transmembrane transporter activity;6.00845214415967e-07!GO:0006366;transcription from RNA polymerase II promoter;6.54240472646732e-07!GO:0009109;coenzyme catabolic process;6.75660134454876e-07!GO:0015630;microtubule cytoskeleton;6.79518452500559e-07!GO:0003714;transcription corepressor activity;7.46393568587681e-07!GO:0009719;response to endogenous stimulus;7.70475019124689e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.90897726013231e-07!GO:0004812;aminoacyl-tRNA ligase activity;7.90897726013231e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.90897726013231e-07!GO:0051188;cofactor biosynthetic process;9.1600994965988e-07!GO:0043038;amino acid activation;9.29875064820979e-07!GO:0006418;tRNA aminoacylation for protein translation;9.29875064820979e-07!GO:0043039;tRNA aminoacylation;9.29875064820979e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.04234979773387e-06!GO:0006323;DNA packaging;1.28744238057445e-06!GO:0005798;Golgi-associated vesicle;1.49284488578276e-06!GO:0006084;acetyl-CoA metabolic process;1.74202365610816e-06!GO:0016564;transcription repressor activity;1.74589832344665e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.58060319864737e-06!GO:0006916;anti-apoptosis;2.80878576430896e-06!GO:0006333;chromatin assembly or disassembly;3.59692078036724e-06!GO:0065004;protein-DNA complex assembly;4.14168499973523e-06!GO:0045786;negative regulation of progression through cell cycle;4.34151199036889e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.16405411428708e-06!GO:0015980;energy derivation by oxidation of organic compounds;5.41337882694364e-06!GO:0065002;intracellular protein transport across a membrane;5.46352761508465e-06!GO:0005643;nuclear pore;5.46352761508465e-06!GO:0009117;nucleotide metabolic process;5.72052733342774e-06!GO:0006752;group transfer coenzyme metabolic process;5.81656682757643e-06!GO:0000139;Golgi membrane;6.10285507954082e-06!GO:0016853;isomerase activity;6.32237252224229e-06!GO:0006613;cotranslational protein targeting to membrane;6.70796483511181e-06!GO:0005773;vacuole;7.32995883048324e-06!GO:0051789;response to protein stimulus;7.90837411469676e-06!GO:0006986;response to unfolded protein;7.90837411469676e-06!GO:0051170;nuclear import;8.25254657319167e-06!GO:0004298;threonine endopeptidase activity;8.33318974638534e-06!GO:0000151;ubiquitin ligase complex;9.37416208283616e-06!GO:0006793;phosphorus metabolic process;9.68128816498187e-06!GO:0006796;phosphate metabolic process;9.68128816498187e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.02902374115049e-05!GO:0005667;transcription factor complex;1.11896241888088e-05!GO:0000279;M phase;1.18088763889815e-05!GO:0016310;phosphorylation;1.21925259101736e-05!GO:0006260;DNA replication;1.23046863234343e-05!GO:0045454;cell redox homeostasis;1.28751917496672e-05!GO:0006606;protein import into nucleus;1.33585628771034e-05!GO:0009108;coenzyme biosynthetic process;1.38881039477035e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.48116996393483e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.56339490117322e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.57075273932835e-05!GO:0046930;pore complex;1.65174089969284e-05!GO:0016859;cis-trans isomerase activity;1.7095943369951e-05!GO:0044440;endosomal part;1.7095943369951e-05!GO:0010008;endosome membrane;1.7095943369951e-05!GO:0008361;regulation of cell size;1.7254318596815e-05!GO:0005905;coated pit;1.79454714747803e-05!GO:0005525;GTP binding;1.81691763385141e-05!GO:0030867;rough endoplasmic reticulum membrane;1.94244016167671e-05!GO:0016049;cell growth;1.95474565459777e-05!GO:0032446;protein modification by small protein conjugation;2.12925648572442e-05!GO:0045259;proton-transporting ATP synthase complex;2.28473916015476e-05!GO:0031252;leading edge;2.54041685623503e-05!GO:0000785;chromatin;2.56551565166235e-05!GO:0044262;cellular carbohydrate metabolic process;2.56551565166235e-05!GO:0005819;spindle;2.57960117292098e-05!GO:0016567;protein ubiquitination;2.59256032811261e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.82932802401691e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.03665312906276e-05!GO:0048522;positive regulation of cellular process;3.37957432287724e-05!GO:0000323;lytic vacuole;3.46443984254914e-05!GO:0005764;lysosome;3.46443984254914e-05!GO:0006612;protein targeting to membrane;3.5772723212101e-05!GO:0030133;transport vesicle;3.6924732647572e-05!GO:0001558;regulation of cell growth;3.6924732647572e-05!GO:0000245;spliceosome assembly;3.74032405793379e-05!GO:0005048;signal sequence binding;3.95282448711242e-05!GO:0003697;single-stranded DNA binding;4.01296296903696e-05!GO:0006334;nucleosome assembly;4.3246427127369e-05!GO:0003676;nucleic acid binding;4.65400445374131e-05!GO:0003724;RNA helicase activity;4.94257285793434e-05!GO:0016740;transferase activity;5.1569067505172e-05!GO:0031324;negative regulation of cellular metabolic process;5.54546120430712e-05!GO:0050657;nucleic acid transport;5.58781365007906e-05!GO:0051236;establishment of RNA localization;5.58781365007906e-05!GO:0050658;RNA transport;5.58781365007906e-05!GO:0006403;RNA localization;6.20281386504824e-05!GO:0043623;cellular protein complex assembly;6.76883608471393e-05!GO:0019843;rRNA binding;6.89721562608709e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.89721562608709e-05!GO:0007005;mitochondrion organization and biogenesis;7.19375733414194e-05!GO:0005813;centrosome;8.22744291932898e-05!GO:0003713;transcription coactivator activity;8.43596972540572e-05!GO:0006364;rRNA processing;9.2104188814271e-05!GO:0008654;phospholipid biosynthetic process;9.35153712278605e-05!GO:0043566;structure-specific DNA binding;9.47496244443457e-05!GO:0032561;guanyl ribonucleotide binding;9.55737651732995e-05!GO:0019001;guanyl nucleotide binding;9.55737651732995e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.60943818424378e-05!GO:0015399;primary active transmembrane transporter activity;9.60943818424378e-05!GO:0005791;rough endoplasmic reticulum;9.99179908388699e-05!GO:0030029;actin filament-based process;0.000105359203935476!GO:0005769;early endosome;0.000105969715991653!GO:0031968;organelle outer membrane;0.000119734098055162!GO:0007243;protein kinase cascade;0.000119957819378027!GO:0007010;cytoskeleton organization and biogenesis;0.000129846246304497!GO:0033116;ER-Golgi intermediate compartment membrane;0.000132076764150887!GO:0016072;rRNA metabolic process;0.000134301248328072!GO:0005762;mitochondrial large ribosomal subunit;0.000140879095421797!GO:0000315;organellar large ribosomal subunit;0.000140879095421797!GO:0019867;outer membrane;0.000153060406228034!GO:0005815;microtubule organizing center;0.000155581564488991!GO:0016563;transcription activator activity;0.000160658359850389!GO:0031497;chromatin assembly;0.000187175680441403!GO:0005770;late endosome;0.000195423072321889!GO:0016044;membrane organization and biogenesis;0.000239198676820443!GO:0043021;ribonucleoprotein binding;0.000250514530499617!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000250897735825414!GO:0004576;oligosaccharyl transferase activity;0.000271664154948364!GO:0008250;oligosaccharyl transferase complex;0.000312197097134549!GO:0051329;interphase of mitotic cell cycle;0.000358491623824682!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000372301076603628!GO:0016568;chromatin modification;0.000398627051672419!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000421048118883803!GO:0048518;positive regulation of biological process;0.000427023603172135!GO:0005885;Arp2/3 protein complex;0.000427621407260853!GO:0005741;mitochondrial outer membrane;0.00046047080983604!GO:0009892;negative regulation of metabolic process;0.000503269895027161!GO:0000314;organellar small ribosomal subunit;0.000511927538473431!GO:0005763;mitochondrial small ribosomal subunit;0.000511927538473431!GO:0043492;ATPase activity, coupled to movement of substances;0.000540611417388226!GO:0030659;cytoplasmic vesicle membrane;0.000592144656914088!GO:0051325;interphase;0.000643698049060892!GO:0006950;response to stress;0.000649070738053827!GO:0018196;peptidyl-asparagine modification;0.000652151227486124!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000652151227486124!GO:0030663;COPI coated vesicle membrane;0.000705294508319379!GO:0030126;COPI vesicle coat;0.000705294508319379!GO:0008092;cytoskeletal protein binding;0.000722092899985045!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000722823245729956!GO:0040008;regulation of growth;0.000729783426192893!GO:0051920;peroxiredoxin activity;0.000819269345209358!GO:0016070;RNA metabolic process;0.000867265202703355!GO:0051028;mRNA transport;0.000878914260560066!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000923568168498733!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00103333878169141!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00108210253869189!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00108843546193514!GO:0008186;RNA-dependent ATPase activity;0.00108957021536188!GO:0016779;nucleotidyltransferase activity;0.00112268226504677!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00126880828496482!GO:0030137;COPI-coated vesicle;0.00127970646424261!GO:0006892;post-Golgi vesicle-mediated transport;0.00134493513644196!GO:0007051;spindle organization and biogenesis;0.00142573134398568!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00145104382096483!GO:0030132;clathrin coat of coated pit;0.00146611802949926!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00157601341393317!GO:0051427;hormone receptor binding;0.00157601341393317!GO:0048471;perinuclear region of cytoplasm;0.00161779422041647!GO:0044433;cytoplasmic vesicle part;0.00163263249193511!GO:0003729;mRNA binding;0.00173198939282805!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00183065232464346!GO:0030658;transport vesicle membrane;0.0018588600401869!GO:0019752;carboxylic acid metabolic process;0.00196325668740052!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00203137924485936!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00203137924485936!GO:0042802;identical protein binding;0.0020412359596766!GO:0030118;clathrin coat;0.00210859848954752!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00210859848954752!GO:0006082;organic acid metabolic process;0.00213975359656707!GO:0065009;regulation of a molecular function;0.00216401092524135!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00218329829543685!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00218329829543685!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00218329829543685!GO:0006818;hydrogen transport;0.00220274459998039!GO:0004177;aminopeptidase activity;0.0022658183418182!GO:0015992;proton transport;0.00227752659911023!GO:0043681;protein import into mitochondrion;0.00228695536377911!GO:0019899;enzyme binding;0.00235778066112181!GO:0022890;inorganic cation transmembrane transporter activity;0.00249372978734169!GO:0009165;nucleotide biosynthetic process;0.0025445990485161!GO:0048500;signal recognition particle;0.00260264457392082!GO:0035257;nuclear hormone receptor binding;0.00284249706063235!GO:0046474;glycerophospholipid biosynthetic process;0.00286876739806079!GO:0045792;negative regulation of cell size;0.00290071162243342!GO:0004004;ATP-dependent RNA helicase activity;0.00290071162243342!GO:0006118;electron transport;0.0029457259094158!GO:0030308;negative regulation of cell growth;0.00295862039765379!GO:0016197;endosome transport;0.00295862039765379!GO:0012506;vesicle membrane;0.00327501980962016!GO:0045045;secretory pathway;0.00332525188136383!GO:0048487;beta-tubulin binding;0.00349758839536102!GO:0030134;ER to Golgi transport vesicle;0.00381037336028721!GO:0008632;apoptotic program;0.0038812559485607!GO:0006891;intra-Golgi vesicle-mediated transport;0.00419458687219885!GO:0046489;phosphoinositide biosynthetic process;0.00428159730903537!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00439113799223345!GO:0031418;L-ascorbic acid binding;0.00462652977074213!GO:0031543;peptidyl-proline dioxygenase activity;0.00465489080448535!GO:0046483;heterocycle metabolic process;0.00470992201301792!GO:0051287;NAD binding;0.00470992201301792!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00470992201301792!GO:0051168;nuclear export;0.0047209231518264!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00474668105972888!GO:0045047;protein targeting to ER;0.00474668105972888!GO:0030660;Golgi-associated vesicle membrane;0.00478523142679434!GO:0030176;integral to endoplasmic reticulum membrane;0.00478523142679434!GO:0015631;tubulin binding;0.00481582387954179!GO:0003899;DNA-directed RNA polymerase activity;0.00502842608359253!GO:0016363;nuclear matrix;0.005100980395756!GO:0030027;lamellipodium;0.00518122209806753!GO:0008312;7S RNA binding;0.00527021954737664!GO:0006979;response to oxidative stress;0.00534615442048596!GO:0016481;negative regulation of transcription;0.0053686898259593!GO:0008139;nuclear localization sequence binding;0.00545011087754203!GO:0007006;mitochondrial membrane organization and biogenesis;0.00556420487178072!GO:0001666;response to hypoxia;0.00564162720717303!GO:0031072;heat shock protein binding;0.0056844623891419!GO:0017166;vinculin binding;0.0056844623891419!GO:0000075;cell cycle checkpoint;0.00573510634206293!GO:0005581;collagen;0.00591476988849592!GO:0031901;early endosome membrane;0.0062332576629378!GO:0006740;NADPH regeneration;0.0062332576629378!GO:0006098;pentose-phosphate shunt;0.0062332576629378!GO:0006402;mRNA catabolic process;0.00634965946300498!GO:0006509;membrane protein ectodomain proteolysis;0.00648283381626291!GO:0033619;membrane protein proteolysis;0.00648283381626291!GO:0030125;clathrin vesicle coat;0.00705154799981674!GO:0030665;clathrin coated vesicle membrane;0.00705154799981674!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00707562081468824!GO:0007050;cell cycle arrest;0.00708750309797273!GO:0050794;regulation of cellular process;0.00713139187612773!GO:0051252;regulation of RNA metabolic process;0.00724241510546757!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00724754964897906!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00724754964897906!GO:0043488;regulation of mRNA stability;0.00724754964897906!GO:0043487;regulation of RNA stability;0.00724754964897906!GO:0007264;small GTPase mediated signal transduction;0.00744850494647989!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00764701741587609!GO:0015002;heme-copper terminal oxidase activity;0.00764701741587609!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00764701741587609!GO:0004129;cytochrome-c oxidase activity;0.00764701741587609!GO:0006007;glucose catabolic process;0.00826589320706438!GO:0000082;G1/S transition of mitotic cell cycle;0.00827878031638297!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0085057382210184!GO:0003711;transcription elongation regulator activity;0.0087198182239758!GO:0008180;signalosome;0.00886877411284475!GO:0007040;lysosome organization and biogenesis;0.00903496783998137!GO:0030119;AP-type membrane coat adaptor complex;0.00906838033909596!GO:0030127;COPII vesicle coat;0.00909917579783277!GO:0012507;ER to Golgi transport vesicle membrane;0.00909917579783277!GO:0009967;positive regulation of signal transduction;0.00911408445405209!GO:0004674;protein serine/threonine kinase activity;0.00912060971072627!GO:0051540;metal cluster binding;0.00963230490064192!GO:0051536;iron-sulfur cluster binding;0.00963230490064192!GO:0000776;kinetochore;0.00994941141428843!GO:0043284;biopolymer biosynthetic process;0.0100945132438491!GO:0008047;enzyme activator activity;0.0103395205947792!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0104793838533294!GO:0035258;steroid hormone receptor binding;0.0105924098267785!GO:0019798;procollagen-proline dioxygenase activity;0.0109420533849816!GO:0000775;chromosome, pericentric region;0.0112150775969163!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0112360371991721!GO:0050662;coenzyme binding;0.0117172044593481!GO:0000059;protein import into nucleus, docking;0.0117214085500829!GO:0045926;negative regulation of growth;0.0118737068899196!GO:0005862;muscle thin filament tropomyosin;0.0120438220545425!GO:0003746;translation elongation factor activity;0.0122604302521764!GO:0030041;actin filament polymerization;0.0123685333916008!GO:0045941;positive regulation of transcription;0.0126276947616531!GO:0006626;protein targeting to mitochondrion;0.0126276947616531!GO:0005869;dynactin complex;0.0130454001215445!GO:0006595;polyamine metabolic process;0.0130454001215445!GO:0032940;secretion by cell;0.0133728983687081!GO:0005975;carbohydrate metabolic process;0.0135663698870517!GO:0051087;chaperone binding;0.0135710251559998!GO:0030521;androgen receptor signaling pathway;0.0136048711746634!GO:0046467;membrane lipid biosynthetic process;0.0139849521573889!GO:0048468;cell development;0.0139881194348584!GO:0008154;actin polymerization and/or depolymerization;0.0146275536828438!GO:0051128;regulation of cellular component organization and biogenesis;0.0146442277252436!GO:0008234;cysteine-type peptidase activity;0.0149090331159863!GO:0006383;transcription from RNA polymerase III promoter;0.0149392152037627!GO:0006401;RNA catabolic process;0.0151422320990582!GO:0006839;mitochondrial transport;0.0152958551525171!GO:0033673;negative regulation of kinase activity;0.0153654625341227!GO:0006469;negative regulation of protein kinase activity;0.0153654625341227!GO:0004197;cysteine-type endopeptidase activity;0.0154859681449732!GO:0005586;collagen type III;0.0162731141680581!GO:0006672;ceramide metabolic process;0.0164347001277555!GO:0030131;clathrin adaptor complex;0.0168161376048125!GO:0030032;lamellipodium biogenesis;0.0168161376048125!GO:0000786;nucleosome;0.0168296949772075!GO:0003779;actin binding;0.0168416970184527!GO:0006414;translational elongation;0.0169274737541127!GO:0009112;nucleobase metabolic process;0.0169280784545058!GO:0005874;microtubule;0.0172003560358036!GO:0051052;regulation of DNA metabolic process;0.0172897614594426!GO:0016860;intramolecular oxidoreductase activity;0.0174820665002872!GO:0016251;general RNA polymerase II transcription factor activity;0.0178303564201582!GO:0005684;U2-dependent spliceosome;0.0183455995560554!GO:0051348;negative regulation of transferase activity;0.0184756497473034!GO:0007033;vacuole organization and biogenesis;0.0186815683368918!GO:0007030;Golgi organization and biogenesis;0.0187518764625881!GO:0006497;protein amino acid lipidation;0.0188830052973625!GO:0016272;prefoldin complex;0.0191526040249203!GO:0008610;lipid biosynthetic process;0.0192835663881506!GO:0043433;negative regulation of transcription factor activity;0.0193013443167423!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0193215024865713!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0193215024865713!GO:0003690;double-stranded DNA binding;0.0195794001266889!GO:0006984;ER-nuclear signaling pathway;0.0198025858768697!GO:0006739;NADP metabolic process;0.0200026741446655!GO:0051101;regulation of DNA binding;0.0207219302017399!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0209528557775577!GO:0005637;nuclear inner membrane;0.0212095055906207!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0213147733465484!GO:0019318;hexose metabolic process;0.021354889708533!GO:0045893;positive regulation of transcription, DNA-dependent;0.0217032574139896!GO:0006897;endocytosis;0.0217344503437301!GO:0010324;membrane invagination;0.0217344503437301!GO:0043022;ribosome binding;0.0220247760105633!GO:0031124;mRNA 3'-end processing;0.0224411665715066!GO:0006650;glycerophospholipid metabolic process;0.0229825618293926!GO:0006354;RNA elongation;0.0232194283753446!GO:0005996;monosaccharide metabolic process;0.0233001658523052!GO:0030145;manganese ion binding;0.0233219288700085!GO:0031529;ruffle organization and biogenesis;0.0233716741227758!GO:0003756;protein disulfide isomerase activity;0.0237139268932508!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0237139268932508!GO:0000049;tRNA binding;0.0237139268932508!GO:0022415;viral reproductive process;0.0238655683077745!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0242036889967608!GO:0032984;macromolecular complex disassembly;0.024391864295266!GO:0030833;regulation of actin filament polymerization;0.0248636213168855!GO:0006417;regulation of translation;0.0249438083177188!GO:0043065;positive regulation of apoptosis;0.0251524259329658!GO:0031625;ubiquitin protein ligase binding;0.0253204615931161!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0253390495060905!GO:0000910;cytokinesis;0.0256717552185777!GO:0003682;chromatin binding;0.0260747279360685!GO:0050811;GABA receptor binding;0.0263516442264782!GO:0000339;RNA cap binding;0.0264508196917899!GO:0006378;mRNA polyadenylation;0.0264508196917899!GO:0001527;microfibril;0.0266551714433097!GO:0005832;chaperonin-containing T-complex;0.0273094237142501!GO:0007052;mitotic spindle organization and biogenesis;0.0284365740201881!GO:0044420;extracellular matrix part;0.0286418830972318!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0289399002104084!GO:0030880;RNA polymerase complex;0.0289681463826898!GO:0016584;nucleosome positioning;0.0299598953814322!GO:0043068;positive regulation of programmed cell death;0.0304433814649605!GO:0046519;sphingoid metabolic process;0.030828687378497!GO:0035035;histone acetyltransferase binding;0.0308684638259143!GO:0050681;androgen receptor binding;0.0309261316867793!GO:0030518;steroid hormone receptor signaling pathway;0.0314785420694312!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.031627013425386!GO:0033043;regulation of organelle organization and biogenesis;0.031627013425386!GO:0000118;histone deacetylase complex;0.0318727577039033!GO:0004287;prolyl oligopeptidase activity;0.032748269176528!GO:0006261;DNA-dependent DNA replication;0.0330609019667676!GO:0008147;structural constituent of bone;0.0330625397478102!GO:0003678;DNA helicase activity;0.0335098953299827!GO:0006520;amino acid metabolic process;0.0343863622494691!GO:0009889;regulation of biosynthetic process;0.0348888859425829!GO:0007034;vacuolar transport;0.0353486486466082!GO:0007242;intracellular signaling cascade;0.0355907808213926!GO:0030384;phosphoinositide metabolic process;0.0365886361750613!GO:0031272;regulation of pseudopodium formation;0.036778943981509!GO:0031269;pseudopodium formation;0.036778943981509!GO:0031344;regulation of cell projection organization and biogenesis;0.036778943981509!GO:0031268;pseudopodium organization and biogenesis;0.036778943981509!GO:0031346;positive regulation of cell projection organization and biogenesis;0.036778943981509!GO:0031274;positive regulation of pseudopodium formation;0.036778943981509!GO:0022411;cellular component disassembly;0.0370227143199635!GO:0001872;zymosan binding;0.0370227143199635!GO:0001878;response to yeast;0.0370227143199635!GO:0008538;proteasome activator activity;0.0370227143199635!GO:0022408;negative regulation of cell-cell adhesion;0.0371571606629056!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0372754852069004!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0372754852069004!GO:0007093;mitotic cell cycle checkpoint;0.037342240631818!GO:0005784;translocon complex;0.0373644960406813!GO:0048037;cofactor binding;0.0377623210412883!GO:0043241;protein complex disassembly;0.0385503323542634!GO:0003923;GPI-anchor transamidase activity;0.0386040228447846!GO:0016255;attachment of GPI anchor to protein;0.0386040228447846!GO:0042765;GPI-anchor transamidase complex;0.0386040228447846!GO:0006506;GPI anchor biosynthetic process;0.0387153896819394!GO:0043086;negative regulation of catalytic activity;0.0401614341184656!GO:0051235;maintenance of localization;0.0401803622219473!GO:0008033;tRNA processing;0.0403842406083494!GO:0045936;negative regulation of phosphate metabolic process;0.0403938757935739!GO:0050790;regulation of catalytic activity;0.0408838579019675!GO:0006607;NLS-bearing substrate import into nucleus;0.041538752747489!GO:0006352;transcription initiation;0.0415825547835499!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0419608766286037!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0423224352496717!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0426279601042147!GO:0006376;mRNA splice site selection;0.0427103912393506!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0427103912393506!GO:0005657;replication fork;0.042721954697671!GO:0006778;porphyrin metabolic process;0.0438448276183822!GO:0033013;tetrapyrrole metabolic process;0.0438448276183822!GO:0030508;thiol-disulfide exchange intermediate activity;0.0439355554959508!GO:0031371;ubiquitin conjugating enzyme complex;0.0447162275631707!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0451806265424089!GO:0006505;GPI anchor metabolic process;0.0456069807272618!GO:0042158;lipoprotein biosynthetic process;0.0456674380716549!GO:0030503;regulation of cell redox homeostasis;0.045917645382274!GO:0006302;double-strand break repair;0.0459626929118944!GO:0006518;peptide metabolic process;0.0459626929118944!GO:0030140;trans-Golgi network transport vesicle;0.0461483748244106!GO:0031326;regulation of cellular biosynthetic process;0.0461526562896146!GO:0051098;regulation of binding;0.0462993584190718!GO:0006693;prostaglandin metabolic process;0.0462993584190718!GO:0006692;prostanoid metabolic process;0.0462993584190718!GO:0001726;ruffle;0.0468424931935401!GO:0006405;RNA export from nucleus;0.0469325535915578!GO:0042168;heme metabolic process;0.0472721898699935!GO:0032507;maintenance of cellular protein localization;0.0483418033252755!GO:0043624;cellular protein complex disassembly;0.0483764907301244!GO:0016301;kinase activity;0.0489565167883569!GO:0008238;exopeptidase activity;0.0489565167883569!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0490123205179003!GO:0000428;DNA-directed RNA polymerase complex;0.0490123205179003
 |sample_id=11255
 |sample_note=machine failed, remainder reloaded, low amount
@@ Line 76: / Line 105: @@
 |sample_tissue=testis
 |top_motifs=NKX2-2,8:1.75522376996;TAL1_TCF{3,4,12}:1.7527429205;EN1,2:1.66442914165;TEAD1:1.46322372316;PAX1,9:1.43400274736;HIF1A:1.40937999368;HOX{A5,B5}:1.31026161301;NFATC1..3:1.31025027492;GLI1..3:1.29440201307;RXRA_VDR{dimer}:1.2711117173;HAND1,2:1.22943095572;MYBL2:1.21013430348;NR3C1:1.16417030016;GZF1:1.16069325969;ZNF238:1.10908292333;CDC5L:1.10433039886;HMGA1,2:1.04476870435;TFAP4:1.04277245476;NFE2L1:0.991408172718;UFEwm:0.978826031405;SRF:0.978443771049;NFIX:0.964722768193;HSF1,2:0.951042270736;IKZF1:0.927167599446;ESRRA:0.912390806269;FOXL1:0.887074508214;FOXD3:0.883167950828;TBP:0.857156430079;MAFB:0.855925348161;TP53:0.85369104509;ADNP_IRX_SIX_ZHX:0.8393179136;ZNF384:0.831881545608;POU5F1:0.828143657314;HLF:0.76791932176;EBF1:0.741784504659;PAX6:0.735537380885;PAX4:0.735372690582;TBX4,5:0.730017447358;ALX4:0.721342166554;HES1:0.710511394133;TEF:0.69222127237;KLF4:0.687969054067;LEF1_TCF7_TCF7L1,2:0.671683573401;GFI1B:0.666056513553;ZNF148:0.650118311501;GTF2A1,2:0.63982712955;GCM1,2:0.638880974377;NKX3-1:0.638182337203;STAT2,4,6:0.595476344734;ZNF423:0.593942141667;HMX1:0.583121199245;MTE{core}:0.579176224489;NFE2L2:0.558838966636;EVI1:0.534993726727;GTF2I:0.527830239062;ESR1:0.52592639984;NR6A1:0.519209468048;PPARG:0.514287163855;LHX3,4:0.514250372735;HOX{A4,D4}:0.499761251598;TLX1..3_NFIC{dimer}:0.489152118049;PRDM1:0.487704933193;AR:0.462882177224;PAX3,7:0.454628816298;MYFfamily:0.438703895484;CEBPA,B_DDIT3:0.431088329325;RXR{A,B,G}:0.429169126783;LMO2:0.427404795979;TOPORS:0.40682416617;CDX1,2,4:0.396329267671;ZIC1..3:0.357082030434;ATF6:0.353028667427;SMAD1..7,9:0.322686498799;NR5A1,2:0.309580493905;MYB:0.308160025079;FOX{I1,J2}:0.295972304398;FOXP3:0.282316715213;HNF1A:0.280329731486;FOXA2:0.221514289039;AHR_ARNT_ARNT2:0.209496592715;TFCP2:0.193061596611;AIRE:0.186446979935;TFAP2B:0.155926653133;MAZ:0.149722608689;IRF1,2:0.144132449856;FOXO1,3,4:0.144129882841;MZF1:0.129205614711;IRF7:0.118803203942;ZBTB6:0.0940385224756;CRX:0.0880162737749;NANOG{mouse}:0.0826048654428;TLX2:0.069592123182;FOXM1:0.0609238656233;MEF2{A,B,C,D}:0.0607669724694;SPZ1:0.0605769974815;NKX3-2:0.0406125355694;SOX17:0.0388508766375;FOS_FOS{B,L1}_JUN{B,D}:-0.000828262750821;NKX6-1,2:-0.00715754030745;BACH2:-0.0292017959561;RUNX1..3:-0.0383293549415;POU3F1..4:-0.0462208380523;REST:-0.047541626899;ATF2:-0.0510261700522;FOSL2:-0.0577589361937;XCPE1{core}:-0.0577951394149;PATZ1:-0.0613038267976;VSX1,2:-0.0704607249235;RFX1:-0.0725442305141;NHLH1,2:-0.0784050222005;bHLH_family:-0.0916671319754;DBP:-0.0937275543609;SOX2:-0.103152327299;ARID5B:-0.155136590723;TFDP1:-0.158421463818;XBP1:-0.169218249727;FOX{D1,D2}:-0.170477356672;YY1:-0.177096604379;RORA:-0.178627154758;PRRX1,2:-0.184137935408;PAX5:-0.187962089959;ZEB1:-0.199369538051;NFKB1_REL_RELA:-0.208820923337;HNF4A_NR2F1,2:-0.211754916177;NFE2:-0.221501861729;TGIF1:-0.245496603746;RREB1:-0.290237279903;MED-1{core}:-0.303788682608;PAX2:-0.304319206644;MTF1:-0.311182893935;HIC1:-0.323038239574;PBX1:-0.325616537356;NANOG:-0.337885687578;HOXA9_MEIS1:-0.35511051029;ETS1,2:-0.365873635224;POU1F1:-0.366895751713;SNAI1..3:-0.370300044111;T:-0.371097873297;ZBTB16:-0.374605042261;NFIL3:-0.374997418584;NR1H4:-0.391224830286;HBP1_HMGB_SSRP1_UBTF:-0.400757962229;SOX{8,9,10}:-0.42600269677;E2F1..5:-0.433660463594;EP300:-0.435285600851;GATA4:-0.455818686476;SOX5:-0.477872596952;TFAP2{A,C}:-0.478624360994;MYOD1:-0.499505057965;OCT4_SOX2{dimer}:-0.51969568308;POU6F1:-0.520845197122;SPIB:-0.527085525293;FOXP1:-0.542474010137;STAT5{A,B}:-0.543357254569;ATF5_CREB3:-0.552101283227;FOXN1:-0.56170531799;ZFP161:-0.565786778016;GATA6:-0.594665703611;PAX8:-0.599405861005;STAT1,3:-0.603695522168;EGR1..3:-0.63741277727;ONECUT1,2:-0.637735790923;ELK1,4_GABP{A,B1}:-0.644232476834;CUX2:-0.645444285233;DMAP1_NCOR{1,2}_SMARC:-0.645452283646;GFI1:-0.651444624873;ZNF143:-0.658541445645;NRF1:-0.662470310238;FOX{F1,F2,J1}:-0.677523918876;PITX1..3:-0.702051049789;HOX{A6,A7,B6,B7}:-0.710896275747;SPI1:-0.715188502672;BPTF:-0.728277433183;NKX2-1,4:-0.728828898234;RBPJ:-0.748467211242;ATF4:-0.760151807253;SP1:-0.766242044469;JUN:-0.782932695752;FOXQ1:-0.785400974027;ELF1,2,4:-0.877616623121;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.88331031703;NFY{A,B,C}:-0.961828723185;IKZF2:-1.01060646522;ALX1:-1.02476611904;NKX2-3_NKX2-5:-1.04222344899;CREB1:-1.05539262322;POU2F1..3:-1.10319253783;BREu{core}:-1.13626566182;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.20687203565;SREBF1,2:-1.2618125774;PDX1:-1.34471898742;RFX2..5_RFXANK_RFXAP:-1.41195484496
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11255-116F4;search_select_hide=table117:FF:11255-116F4
 }}

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FF:11255-116F4: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 16:28, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0