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{{f5samples
{{f5samples
|id=FF:11255-116F4
|DRA_sample_Accession=CAGE@SAMD00005843
|name=Sertoli Cells, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005843
|sample_id=11255
|accession_numbers=CAGE;DRX008450;DRR009322;DRZ000747;DRZ002132;DRZ012097;DRZ013482
|rna_tube_id=116F4
|accession_numbers_RNASeq=sRNA-Seq;DRX037025;DRR041391;DRZ007033
|rna_box=116
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000473,UBERON:0001136,UBERON:0000483,UBERON:0000991,UBERON:0001343,UBERON:0000479,UBERON:0000058,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0003133,UBERON:0005904,UBERON:0000487,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0004910,UBERON:0004909,UBERON:0004813,UBERON:0003101,UBERON:0000079
|rna_position=F4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000511,CL:0000630,CL:0002625,CL:0000154,CL:0000255,CL:0000077,CL:0000216
|sample_cell_lot=lot:230501081
|sample_cell_catalog=MM-HSE-2305
|sample_company=Lonza
|rna_lot_number=
|rna_catalog_number=N/A
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=23 years old adult
|sample_tissue=testis
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=23
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=0.92
|rna_od260/280=2.08
|sample_cell_type=sertoli cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=21.4
|rna_concentration=0.85
|sample_note=machine failed, remainder reloaded, low amount
|profile_hcage=CNhs10851,LSID700,release009,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10003,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000076,CL:0000077,CL:0000144,CL:0000151,CL:0000154,CL:0000213,CL:0000215,CL:0000216,CL:0000220,CL:0000222,CL:0000255,CL:0000511,CL:0000548,CL:0000630,CL:0002321,CL:0002625
|ancestors_in_anatomy_facet=UBERON:0000058,UBERON:0000061,UBERON:0000062,UBERON:0000079,UBERON:0000119,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000473,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000483,UBERON:0000487,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0000990,UBERON:0000991,UBERON:0001048,UBERON:0001062,UBERON:0001136,UBERON:0001343,UBERON:0002050,UBERON:0002323,UBERON:0002532,UBERON:0002553,UBERON:0003101,UBERON:0003133,UBERON:0003135,UBERON:0004111,UBERON:0004120,UBERON:0004176,UBERON:0004458,UBERON:0004813,UBERON:0004909,UBERON:0004910,UBERON:0005156,UBERON:0005423,UBERON:0005564,UBERON:0005904,UBERON:0006914,UBERON:0009117,UBERON:0009196
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000161
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr1:197886461..197886558,+!p1@LHX9!2.47!294.05!LHX9;;chr8:11561684..11561751,+!p1@GATA4!1.73!53.03!GATA4;;chr6:134210243..134210257,+!p1@TCF21!1.71!49.81!TCF21;;chr2:19558373..19558392,-!p1@OSR1!1.64!112.48!OSR1;;chr11:46299199..46299233,+!p1@CREB3L1!1.51!157.47!CREB3L1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.43!25.71!HOXC5;;chr11:61520075..61520136,+!p1@C11orf9!1.34!43.38!C11orf9;;chr1:170633348..170633399,+!p2@PRRX1!1.27!24.10!PRRX1;;chr11:46299539..46299620,+!p2@CREB3L1!1.24!27.32!CREB3L1;;chr5:139492456..139492489,+!p7@PURA!1.23!16.07!PURA;;chr8:72756637..72756664,-!p3@MSC!1.22!17.68!MSC;;chr18:53068911..53068935,-!p4@TCF4!1.14!14.46!TCF4;;chr14:62162258..62162269,+!p2@HIF1A!1.10!110.87!HIF1A;;chr5:72744445..72744466,-!p2@FOXD1!1.10!19.28!FOXD1;;chr11:46299186..46299195,+!p3@CREB3L1!1.10!12.85!CREB3L1;;chr18:19749386..19749404,+!p2@GATA6!1.09!16.07!GATA6;;chr1:170632285..170632309,+!p1@PRRX1!1.09!12.85!PRRX1;;chr3:25470156..25470227,+!p2@RARB!1.09!11.25!RARB;;chr9:127269661..127269719,-!p1@NR5A1!1.09!11.25!NR5A1;;chr8:72756667..72756736,-!p2@MSC!1.05!16.07!MSC;;chr1:170632959..170632987,+!p4@PRRX1!1.05!11.25!PRRX1;;chr8:72756267..72756296,-!p4@MSC!1.03!14.46!MSC;;chr1:170633262..170633285,+!p3@PRRX1!1.03!11.25!PRRX1;;chr19:46801639..46801699,+!p1@HIF3A!1.03!9.64!HIF3A;;chr16:31076332..31076388,-!p3@ZNF668!1.03!9.64!ZNF668;;chr7:1577899..1577943,+!p3@MAFK!1.03!9.64!MAFK;;chr2:177053386..177053402,+!p1@HOXD1!1.03!9.64!HOXD1;;chr14:62162285..62162296,+!p3@HIF1A!1.02!49.81!HIF1A;;chr17:1959369..1959388,+!p2@HIC1!1.00!24.10!HIC1;;chr10:63809013..63809041,+!p3@ARID5B!0.99!49.81!ARID5B;;chr15:96869255..96869291,+!p6@NR2F2!0.99!16.07!NR2F2;;chr8:72756063..72756125,-!p1@MSC!0.98!17.68!MSC;;chr16:67881588..67881612,-!p2@CENPT!0.96!11.25!CENPT;;chr2:176994408..176994492,+!p1@HOXD8!0.96!8.03!HOXD8;;chr2:177001290..177001315,+!p1@HOXD3!0.96!8.03!HOXD3;;chr3:25469815..25469866,+!p3@RARB!0.96!8.03!RARB;;chrY:21906594..21906622,-!p1@KDM5D!0.96!8.03!KDM5D;;chr1:197886665..197886732,+!p3@LHX9!0.96!8.03!LHX9;;chr8:55370487..55370503,+!p1@SOX17!0.96!8.03!SOX17;;chr12:54402745..54402788,+!p1@HOXC8!0.96!8.03!HOXC8;;chr18:19749541..19749557,+!p1@GATA6!0.95!25.71!GATA6;;chr3:141105705..141105770,+!p4@ZBTB38!0.95!9.64!ZBTB38;;chr8:106330656..106330684,+!p1@ZFPM2!0.94!20.89!ZFPM2;;chr19:13136130..13136165,+!p6@NFIX!0.91!9.64!NFIX;;chr1:23696348..23696363,-!p4@ZNF436!0.91!8.03!ZNF436;;chr17:1958388..1958404,+!p1@HIC1!0.90!46.60!HIC1;;chr5:92918919..92918942,+!p1@NR2F1!0.90!32.14!NR2F1;;chr18:3450293..3450304,+!p4@TGIF1!0.90!17.68!TGIF1;;chr12:80085061..80085119,-!p6@PAWR!0.90!11.25!PAWR;;chr2:239756671..239756732,+!p1@TWIST2!0.89!22.50!TWIST2;;chr2:176994919..176994931,+!p2@HOXD8!0.87!6.43!HOXD8;;chr9:16705069..16705086,-!p3@BNC2!0.87!6.43!BNC2;;chr8:11534462..11534475,+!p6@GATA4!0.87!6.43!GATA4;;chr12:80085120..80085156,-!p14@PAWR!0.87!6.43!PAWR;;chr19:47523058..47523114,+!p1@NPAS1!0.87!6.43!NPAS1;;chr5:158526917..158526932,-!p1@EBF1!0.85!16.07!EBF1;;chr15:42749722..42749739,-!p2@ZFP106!0.85!11.25!ZFP106;;chr18:19749517..19749531,+!p3@GATA6!0.85!11.25!GATA6;;chr8:72756213..72756243,-!p5@MSC!0.85!8.03!MSC;;chr19:45260775..45260838,+!p5@BCL3!0.85!8.03!BCL3;;chr1:158979872..158979898,+!p3@IFI16!0.84!19.28!IFI16;;chr1:8938709..8938720,-!p3@ENO1!0.83!298.87!ENO1;;chr14:62203595..62203676,+!p4@HIF1A!0.83!11.25!HIF1A;;chr10:63808979..63808990,+!p8@ARID5B!0.83!6.43!ARID5B;;chr10:63853436..63853442,+!p4@ARID5B!0.82!32.14!ARID5B;;chr1:158969752..158969780,+!p6@IFI16!0.80!9.64!IFI16;;chr10:63809106..63809127,+!p1@ARID5B!0.79!75.52!ARID5B;;chr8:106330696..106330719,+!p2@ZFPM2!0.77!6.43!ZFPM2;;chr6:19837592..19837621,+!p1@ID4!0.76!32.14!ID4;;chr2:121493425..121493474,+!p1@GLI2!0.76!11.25!GLI2;;chr15:96874145..96874166,+!p7@NR2F2!0.76!9.64!NR2F2;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.76!4.82!SEBOX;;chr18:53068940..53068951,-!p21@TCF4!0.76!4.82!TCF4;;chr2:176973498..176973524,+!p1@HOXD10!0.76!4.82!HOXD10;;chr4:174450089..174450153,-!p2@HAND2!0.76!4.82!HAND2;;chrY:2803415..2803468,+!p1@ZFY!0.76!4.82!ZFY;;chr8:11534438..11534451,+!p3@GATA4!0.76!4.82!GATA4;;chr8:72756380..72756427,-!p8@MSC!0.76!4.82!MSC;;chr8:93074848..93074871,-!p3@RUNX1T1!0.76!4.82!RUNX1T1;;chr11:46333934..46333963,+!p5@CREB3L1!0.76!4.82!CREB3L1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.76!4.82!HOXC5;;chr1:170632723..170632739,+!p8@PRRX1!0.76!4.82!PRRX1;;chr12:124873357..124873401,-!p1@NCOR2!0.74!57.85!NCOR2;;chr2:239756739..239756755,+!p2@TWIST2!0.74!8.03!TWIST2;;chr5:92918956..92918969,+!p4@NR2F1!0.73!4.82!NR2F1;;chr15:96869292..96869320,+!p15@NR2F2!0.72!6.43!NR2F2;;chr9:4300050..4300118,-!p1@GLIS3!0.71!30.53!GLIS3;;chr9:35732647..35732678,+!p2@CREB3!0.71!25.71!CREB3;;chr11:65686732..65686756,+!p2@DRAP1!0.71!19.28!DRAP1;;chr19:13134772..13134822,+!p2@NFIX!0.71!6.43!NFIX;;chr15:96869222..96869251,+!p18@NR2F2!0.70!4.82!NR2F2;;chr3:71007344..71007348,-!p6@FOXP1!0.69!17.68!FOXP1;;chr11:62369383..62369399,-!p6@MTA2!0.69!9.64!MTA2;;chr19:31840130..31840160,-!p2@TSHZ3!0.69!6.43!TSHZ3;;chr14:62162224..62162254,+!p1@HIF1A!0.68!637.92!HIF1A;;chr19:45251943..45252006,+!p1@BCL3!0.68!114.09!BCL3;;chr7:44143925..44143970,+!p1@AEBP1!0.68!98.02!AEBP1;;chr6:144289132..144289134,-!p3@PLAGL1!0.68!9.64!PLAGL1;;chr21:36260343..36260402,-!p6@RUNX1!0.68!6.43!RUNX1;;chr1:23696448..23696453,-!p5@ZNF436!0.68!4.82!ZNF436;;chr6:85473156..85473210,-!p2@TBX18!0.68!4.82!TBX18;;chr19:47922750..47922795,-!p1@MEIS3!0.67!6.43!MEIS3;;chr7:44143997..44144008,+!p3@AEBP1!0.67!4.82!AEBP1;;chr9:117150303..117150312,-!p3@AKNA!0.67!4.82!AKNA;;chr11:12696002..12696022,+!p2@TEAD1!0.66!9.64!TEAD1;;chr2:121493492..121493537,+!p2@GLI2!0.66!6.43!GLI2;;chr12:80084137..80084165,-!p10@PAWR!0.66!4.82!PAWR;;chr14:62213758..62213774,+!p8@HIF1A!0.66!4.82!HIF1A;;chr19:18391615..18391637,-!p5@JUND!0.66!4.82!JUND;;chr6:126102292..126102329,+!p3@NCOA7!0.65!12.85!NCOA7;;chr8:48650982..48651023,-!p3@CEBPD!0.65!9.64!CEBPD;;chr1:23696308..23696339,-!p2@ZNF436!0.65!8.03!ZNF436;;chr17:59477197..59477212,+!p2@TBX2!0.65!6.43!TBX2;;chr17:42295897..42295953,-!p10@UBTF!0.65!4.82!UBTF;;chr5:158526459..158526481,-!p2@EBF1!0.65!4.82!EBF1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.64!35.35!PPP1R13L;;chr3:37217736..37217753,-!p2@LRRFIP2!0.64!16.07!LRRFIP2;;chr10:63809077..63809089,+!p5@ARID5B!0.64!8.03!ARID5B;;chr1:8924055..8924074,-!p9@ENO1!0.64!6.43!ENO1;;chr12:26277817..26277863,-!p2@BHLHE41!0.64!4.82!BHLHE41;;chr11:65667884..65667895,-!p2@FOSL1!0.63!14.46!FOSL1;;chr12:3069037..3069119,+!p2@TEAD4!0.63!12.85!TEAD4;;chr12:104531785..104531812,-!p3@NFYB!0.63!9.64!NFYB;;chr10:77161650..77161661,-!p4@ZNF503!0.63!4.82!ZNF503;;chr17:46127997..46128015,+!p5@NFE2L1!0.63!4.82!NFE2L1;;chr1:23885981..23886002,-!p1@ID3!0.62!673.27!ID3;;chr14:62213827..62213853,+!p6@HIF1A!0.62!4.82!HIF1A;;chr11:125034586..125034604,+!p3@PKNOX2!0.62!3.21!PKNOX2;;chr11:125034605..125034636,+!p2@PKNOX2!0.62!3.21!PKNOX2;;chr11:2292226..2292270,-!p1@ASCL2!0.62!3.21!ASCL2;;chr11:46299443..46299459,+!p4@CREB3L1!0.62!3.21!CREB3L1;;chr12:54394309..54394336,+!p2@HOXC9!0.62!3.21!HOXC9;;chr14:37131058..37131139,+!p1@PAX9!0.62!3.21!PAX9;;chr1:197886421..197886432,+!p2@LHX9!0.62!3.21!LHX9;;chr1:197886617..197886628,+!p8@LHX9!0.62!3.21!LHX9;;chr1:197886646..197886657,+!p5@LHX9!0.62!3.21!LHX9;;chr1:197886772..197886790,+!p4@LHX9!0.62!3.21!LHX9;;chr1:201979703..201979721,+!p2@ELF3!0.62!3.21!ELF3;;chr9:16727880..16727894,-!p10@BNC2!0.62!3.21!BNC2;;chr9:16727949..16727965,-!p14@BNC2!0.62!3.21!BNC2;;chr9:16727978..16728010,-!p6@BNC2!0.62!3.21!BNC2;;chr15:67430381..67430396,+!p21@SMAD3!0.62!3.21!SMAD3;;chr15:80843484..80843499,+!p5@ARNT2!0.62!3.21!ARNT2;;chr18:53070913..53070933,-!p16@TCF4!0.62!3.21!TCF4;;chr19:13135386..13135435,+!p4@NFIX!0.62!3.21!NFIX;;chr19:13135832..13135853,+!p16@NFIX!0.62!3.21!NFIX;;chr19:13136057..13136085,+!p11@NFIX!0.62!3.21!NFIX;;chr2:176981499..176981522,+!p2@HOXD10!0.62!3.21!HOXD10;;chr2:176987463..176987479,+!p2@HOXD9!0.62!3.21!HOXD9;;chr2:176987485..176987496,+!p3@HOXD9!0.62!3.21!HOXD9;;chr2:19558327..19558334,-!p2@OSR1!0.62!3.21!OSR1;;chr2:46612891..46612907,+!p10@EPAS1!0.62!3.21!EPAS1;;chr3:141087562..141087594,+!p12@ZBTB38!0.62!3.21!ZBTB38;;chr5:158523468..158523481,-!p20@EBF1!0.62!3.21!EBF1;;chr6:85473227..85473243,-!p5@TBX18!0.62!3.21!TBX18;;chr7:1577076..1577095,+!p5@MAFK!0.62!3.21!MAFK;;chr8:11534521..11534533,+!p4@GATA4!0.62!3.21!GATA4;;chr8:25902876..25902936,-!p1@EBF2!0.62!3.21!EBF2;;chr8:72755987..72756002,-!p7@MSC!0.62!3.21!MSC;;chr8:93115584..93115642,-!p5@RUNX1T1!0.62!3.21!RUNX1T1;;chr9:100615499..100615519,+!p1@FOXE1!0.62!3.21!FOXE1;;chr10:63809134..63809145,+!p6@ARID5B!0.61!8.03!ARID5B;;chr2:166326200..166326216,+!p1@CSRNP3!0.61!4.82!CSRNP3;;chr2:238600933..238600985,+!p3@LRRFIP1!0.60!19.28!LRRFIP1;;chr19:13106214..13106382,+!p1@NFIX!0.59!81.95!NFIX;;chr19:45252008..45252024,+!p2@BCL3!0.59!11.25!BCL3;;chr20:42543506..42543549,+!p2@TOX2!0.59!8.03!TOX2;;chr3:141121847..141121868,+!p5@ZBTB38!0.59!4.82!ZBTB38;;chr5:92919375..92919438,+!p6@NR2F1!0.59!3.21!NR2F1;;chrX:128657457..128657475,-!p1@SMARCA1!0.58!40.17!SMARCA1;;chr22:38598086..38598105,+!p1@MAFF!0.58!36.96!MAFF;;chr2:66662281..66662308,+!p1@MEIS1!0.57!11.25!MEIS1;;chr3:187463220..187463232,-!p3@BCL6!0.57!9.64!BCL6;;chr8:145159324..145159333,+!p5@MAF1!0.57!6.43!MAF1;;chr2:101591314..101591333,+!p2@NPAS2!0.57!3.21!NPAS2;;chr3:71631382..71631413,-!p20@FOXP1!0.57!3.21!FOXP1;;chr19:16435625..16435682,+!p1@KLF2!0.56!107.66!KLF2;;chr2:208030647..208030689,-!p1@KLF7!0.56!27.32!KLF7;;chr15:96873984..96873999,+!p3@NR2F2!0.56!24.10!NR2F2;;chr20:42543441..42543497,+!p1@TOX2!0.56!14.46!TOX2;;chr2:178129358..178129403,-!p5@NFE2L2!0.56!12.85!NFE2L2;;chr15:96874927..96874938,+!p8@NR2F2!0.56!6.43!NR2F2;;chr17:7492684..7492778,-!p2@SOX15!0.56!6.43!SOX15;;chr19:17356189..17356221,-!p2@NR2F6!0.56!4.82!NR2F6;;chr20:48807615..48807644,+!p6@CEBPB!0.56!4.82!CEBPB;;chr9:14082760..14082775,-!p6@NFIB!0.56!4.82!NFIB;;chr3:107244229..107244254,+!p3@BBX!0.56!4.8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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000154;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000630;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000079;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000487;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003135;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004871;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004876;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0006914
|ffid_belonging_in_development=CL:0000222
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
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|rna_box=116
|rna_catalog_number=N/A
|rna_concentration=0.85
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=0.92
|rna_od260/280=2.08
|rna_position=F4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=116F4
|rna_weight_ug=21.4
|rnaseq_library_id=SRhi10003.GTAGAG
|sample_age=23
|sample_category=primary cells
|sample_cell_catalog=MM-HSE-2305
|sample_cell_line=
|sample_cell_lot=lot:230501081
|sample_cell_type=sertoli cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Lonza
|sample_description=
|sample_dev_stage=23 years old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.96620582887302e-228!GO:0005737;cytoplasm;4.85659108190568e-186!GO:0043226;organelle;1.6924220817566e-138!GO:0043229;intracellular organelle;3.71575283440761e-138!GO:0044444;cytoplasmic part;2.81744178941001e-136!GO:0043231;intracellular membrane-bound organelle;6.50746974414707e-135!GO:0043227;membrane-bound organelle;1.0989192267793e-134!GO:0044422;organelle part;9.81592447004289e-120!GO:0044446;intracellular organelle part;2.71540530109482e-118!GO:0032991;macromolecular complex;6.13618969492679e-90!GO:0005515;protein binding;1.67660118732137e-79!GO:0030529;ribonucleoprotein complex;1.17474650107778e-72!GO:0044237;cellular metabolic process;1.37159765061086e-62!GO:0044238;primary metabolic process;3.01538209462408e-62!GO:0043233;organelle lumen;2.2984581880275e-58!GO:0031974;membrane-enclosed lumen;2.2984581880275e-58!GO:0043170;macromolecule metabolic process;1.14147795236839e-56!GO:0005739;mitochondrion;1.89891398306399e-55!GO:0003723;RNA binding;4.03728157655713e-54!GO:0019538;protein metabolic process;9.3610628789041e-54!GO:0044428;nuclear part;3.26415200337211e-52!GO:0044260;cellular macromolecule metabolic process;2.07321296844339e-48!GO:0043234;protein complex;2.32887306950949e-47!GO:0044267;cellular protein metabolic process;5.24775446473489e-47!GO:0005840;ribosome;1.27049061955155e-46!GO:0031090;organelle membrane;7.0434277165949e-46!GO:0006412;translation;3.04733719168332e-45!GO:0016043;cellular component organization and biogenesis;2.92729170503481e-42!GO:0003735;structural constituent of ribosome;2.88563877106133e-41!GO:0015031;protein transport;3.85948935972741e-40!GO:0005829;cytosol;3.85948935972741e-40!GO:0033036;macromolecule localization;8.73208926658904e-40!GO:0045184;establishment of protein localization;9.78338683253782e-38!GO:0009058;biosynthetic process;2.06767645414307e-37!GO:0044429;mitochondrial part;4.78817313959023e-37!GO:0008104;protein localization;6.54833203012018e-37!GO:0044249;cellular biosynthetic process;1.52595760536205e-36!GO:0033279;ribosomal subunit;2.7807445648432e-36!GO:0005634;nucleus;3.18019600175795e-36!GO:0009059;macromolecule biosynthetic process;9.08142132325973e-36!GO:0006396;RNA processing;1.69769465386736e-35!GO:0046907;intracellular transport;5.69011276238877e-34!GO:0031981;nuclear lumen;1.445309525258e-32!GO:0016071;mRNA metabolic process;2.06968307246068e-32!GO:0031967;organelle envelope;3.17503553904106e-32!GO:0031975;envelope;6.23127041241742e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.21130853507849e-28!GO:0006397;mRNA processing;8.21130853507849e-28!GO:0043228;non-membrane-bound organelle;1.71875483010747e-27!GO:0043232;intracellular non-membrane-bound organelle;1.71875483010747e-27!GO:0065003;macromolecular complex assembly;2.30724883065662e-27!GO:0008380;RNA splicing;3.7065911154456e-27!GO:0006886;intracellular protein transport;1.26408650226472e-26!GO:0006996;organelle organization and biogenesis;7.23343458891827e-25!GO:0022607;cellular component assembly;6.58665354918221e-24!GO:0005783;endoplasmic reticulum;6.86649035689839e-24!GO:0005740;mitochondrial envelope;1.22583430683292e-23!GO:0044445;cytosolic part;1.75884625073858e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.41749761969043e-23!GO:0031966;mitochondrial membrane;1.73655380375869e-22!GO:0006457;protein folding;4.40039236329811e-22!GO:0051641;cellular localization;5.94604715910592e-22!GO:0051649;establishment of cellular localization;6.81789744817677e-22!GO:0019866;organelle inner membrane;1.04402316042619e-21!GO:0012505;endomembrane system;2.59354345017973e-21!GO:0043283;biopolymer metabolic process;4.66014304265211e-21!GO:0000166;nucleotide binding;5.63389300931783e-21!GO:0005654;nucleoplasm;1.28932413379806e-20!GO:0005794;Golgi apparatus;2.22181378330828e-20!GO:0006119;oxidative phosphorylation;2.5363139717866e-20!GO:0005743;mitochondrial inner membrane;3.81173455106377e-20!GO:0005681;spliceosome;6.88377345579563e-20!GO:0048770;pigment granule;1.02777135443755e-19!GO:0042470;melanosome;1.02777135443755e-19!GO:0016462;pyrophosphatase activity;1.07181947530437e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.62865501934228e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;2.12319346887952e-19!GO:0017111;nucleoside-triphosphatase activity;2.1658523345236e-19!GO:0015935;small ribosomal subunit;8.1171874978277e-19!GO:0015934;large ribosomal subunit;2.09324630765731e-18!GO:0007049;cell cycle;4.74223079798197e-18!GO:0044455;mitochondrial membrane part;7.15855663222442e-18!GO:0044432;endoplasmic reticulum part;7.22825014709616e-18!GO:0010467;gene expression;2.98804786053981e-17!GO:0044451;nucleoplasm part;8.07176879378107e-17!GO:0006259;DNA metabolic process;2.01335059326989e-16!GO:0022618;protein-RNA complex assembly;3.35177758928568e-16!GO:0031980;mitochondrial lumen;4.36369964007828e-16!GO:0005759;mitochondrial matrix;4.36369964007828e-16!GO:0008134;transcription factor binding;6.01656647487897e-16!GO:0048193;Golgi vesicle transport;6.74530111430853e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.61520503399938e-15!GO:0005746;mitochondrial respiratory chain;1.67740264424457e-15!GO:0017076;purine nucleotide binding;1.95792841175772e-15!GO:0032553;ribonucleotide binding;3.31717033106509e-15!GO:0032555;purine ribonucleotide binding;3.31717033106509e-15!GO:0044265;cellular macromolecule catabolic process;6.19548037721227e-15!GO:0006512;ubiquitin cycle;9.31015407867832e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.18100069539674e-14!GO:0016874;ligase activity;1.25213427950278e-14!GO:0051186;cofactor metabolic process;2.08986884558334e-14!GO:0008135;translation factor activity, nucleic acid binding;2.32411708242274e-14!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.18421339906524e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.22276322598214e-14!GO:0051082;unfolded protein binding;6.72719431533537e-14!GO:0022402;cell cycle process;8.16048981909413e-14!GO:0016192;vesicle-mediated transport;9.56601345875459e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.0981072127465e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.62335890415693e-13!GO:0003954;NADH dehydrogenase activity;2.62335890415693e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.62335890415693e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;2.62602815760076e-13!GO:0043285;biopolymer catabolic process;3.00505670231274e-13!GO:0044248;cellular catabolic process;3.6806147520313e-13!GO:0009057;macromolecule catabolic process;4.80053795911086e-13!GO:0000278;mitotic cell cycle;4.8539112825966e-13!GO:0019941;modification-dependent protein catabolic process;4.88438389534044e-13!GO:0043632;modification-dependent macromolecule catabolic process;4.88438389534044e-13!GO:0006511;ubiquitin-dependent protein catabolic process;5.78982859058812e-13!GO:0006605;protein targeting;6.07977199130526e-13!GO:0044257;cellular protein catabolic process;6.07977199130526e-13!GO:0005761;mitochondrial ribosome;1.09517827327302e-12!GO:0000313;organellar ribosome;1.09517827327302e-12!GO:0005730;nucleolus;2.08353868719784e-12!GO:0030554;adenyl nucleotide binding;2.24454517262345e-12!GO:0005793;ER-Golgi intermediate compartment;2.427046906356e-12!GO:0032559;adenyl ribonucleotide binding;2.65554338899611e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.70653429092474e-12!GO:0005524;ATP binding;3.08475099643729e-12!GO:0043412;biopolymer modification;4.5967555935913e-12!GO:0005789;endoplasmic reticulum membrane;9.60400392223098e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.17634109990813e-11!GO:0042773;ATP synthesis coupled electron transport;1.17634109990813e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.21170754926018e-11!GO:0012501;programmed cell death;1.44713103732794e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.72600842739098e-11!GO:0045271;respiratory chain complex I;1.72600842739098e-11!GO:0005747;mitochondrial respiratory chain complex I;1.72600842739098e-11!GO:0003743;translation initiation factor activity;1.81836162321258e-11!GO:0006732;coenzyme metabolic process;1.8260668156182e-11!GO:0006915;apoptosis;2.59474697321683e-11!GO:0030163;protein catabolic process;3.30310883511899e-11!GO:0006464;protein modification process;4.48899506000292e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.96158066998366e-11!GO:0003712;transcription cofactor activity;8.14669953545069e-11!GO:0006413;translational initiation;8.95488937894833e-11!GO:0009055;electron carrier activity;8.95488937894833e-11!GO:0016887;ATPase activity;1.1691253808072e-10!GO:0048523;negative regulation of cellular process;2.05059597559513e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;2.23446917371913e-10!GO:0000375;RNA splicing, via transesterification reactions;2.23446917371913e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.23446917371913e-10!GO:0042623;ATPase activity, coupled;3.31164426731642e-10!GO:0008219;cell death;4.48200979573958e-10!GO:0016265;death;4.48200979573958e-10!GO:0016491;oxidoreductase activity;1.17754480023471e-09!GO:0006913;nucleocytoplasmic transport;1.26559899093229e-09!GO:0009259;ribonucleotide metabolic process;1.49047885603258e-09!GO:0043687;post-translational protein modification;1.93380646441365e-09!GO:0000087;M phase of mitotic cell cycle;2.01839269200851e-09!GO:0006446;regulation of translational initiation;2.16742467404891e-09!GO:0051726;regulation of cell cycle;2.20646750747304e-09!GO:0007067;mitosis;2.30660472508333e-09!GO:0005635;nuclear envelope;2.57018001208094e-09!GO:0051169;nuclear transport;2.57018001208094e-09!GO:0000074;regulation of progression through cell cycle;2.71687229142936e-09!GO:0031965;nuclear membrane;3.79259693016756e-09!GO:0009150;purine ribonucleotide metabolic process;4.41521558867291e-09!GO:0006974;response to DNA damage stimulus;4.41521558867291e-09!GO:0006163;purine nucleotide metabolic process;6.08111689171436e-09!GO:0008565;protein transporter activity;6.18455137607425e-09!GO:0016604;nuclear body;6.35477631653981e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.62251191163565e-09!GO:0048519;negative regulation of biological process;6.62671028248404e-09!GO:0005788;endoplasmic reticulum lumen;6.6655804445098e-09!GO:0016023;cytoplasmic membrane-bound vesicle;7.8603830716376e-09!GO:0031988;membrane-bound vesicle;7.95405329513625e-09!GO:0006888;ER to Golgi vesicle-mediated transport;1.21426592667316e-08!GO:0009260;ribonucleotide biosynthetic process;1.35647461722477e-08!GO:0008639;small protein conjugating enzyme activity;1.48798303853771e-08!GO:0051301;cell division;1.57994859052299e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.58907777998699e-08!GO:0006461;protein complex assembly;1.82166956951393e-08!GO:0030120;vesicle coat;2.09089877355808e-08!GO:0030662;coated vesicle membrane;2.09089877355808e-08!GO:0006164;purine nucleotide biosynthetic process;2.29660117863321e-08!GO:0009060;aerobic respiration;2.32099882295919e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.52013229121959e-08!GO:0004842;ubiquitin-protein ligase activity;2.74206806047363e-08!GO:0009141;nucleoside triphosphate metabolic process;3.67996276304444e-08!GO:0009199;ribonucleoside triphosphate metabolic process;3.67996276304444e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.1273319355267e-08!GO:0019787;small conjugating protein ligase activity;4.36800191012723e-08!GO:0042254;ribosome biogenesis and assembly;4.69283418176791e-08!GO:0044453;nuclear membrane part;4.72426733472912e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.05675521183336e-08!GO:0009144;purine nucleoside triphosphate metabolic process;5.05675521183336e-08!GO:0015986;ATP synthesis coupled proton transport;5.28956857088897e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.28956857088897e-08!GO:0045333;cellular respiration;5.38024913834207e-08!GO:0044431;Golgi apparatus part;5.94966333118614e-08!GO:0009056;catabolic process;6.37307676978579e-08!GO:0005694;chromosome;6.40338058209932e-08!GO:0022403;cell cycle phase;8.57616760466003e-08!GO:0019829;cation-transporting ATPase activity;9.62219488781117e-08!GO:0003924;GTPase activity;9.71780052828491e-08!GO:0046034;ATP metabolic process;1.1093726818552e-07!GO:0008026;ATP-dependent helicase activity;1.12799918149478e-07!GO:0048475;coated membrane;1.15235584061987e-07!GO:0030117;membrane coat;1.15235584061987e-07!GO:0043069;negative regulation of programmed cell death;1.28196573271163e-07!GO:0051276;chromosome organization and biogenesis;1.36119597267532e-07!GO:0043067;regulation of programmed cell death;1.90928827229305e-07!GO:0042981;regulation of apoptosis;1.95608938696608e-07!GO:0051246;regulation of protein metabolic process;1.98317603068477e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.01910928089561e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.01910928089561e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.12566463625416e-07!GO:0043066;negative regulation of apoptosis;2.37626364598086e-07!GO:0051187;cofactor catabolic process;2.56621971433467e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.78108576822978e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.78108576822978e-07!GO:0016607;nuclear speck;2.99175512594795e-07!GO:0004386;helicase activity;3.01238062573685e-07!GO:0005768;endosome;3.11533103104508e-07!GO:0044427;chromosomal part;3.11533103104508e-07!GO:0016787;hydrolase activity;3.14858596089936e-07!GO:0017038;protein import;3.29841556504269e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.34996364598487e-07!GO:0016881;acid-amino acid ligase activity;3.45033982396052e-07!GO:0006091;generation of precursor metabolites and energy;3.8092753894815e-07!GO:0031982;vesicle;3.8092753894815e-07!GO:0006399;tRNA metabolic process;4.08951114451237e-07!GO:0006099;tricarboxylic acid cycle;4.758820894617e-07!GO:0046356;acetyl-CoA catabolic process;4.758820894617e-07!GO:0031410;cytoplasmic vesicle;4.80649036517751e-07!GO:0006754;ATP biosynthetic process;4.93230325406421e-07!GO:0006753;nucleoside phosphate metabolic process;4.93230325406421e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;5.45521741436085e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.48385476248664e-07!GO:0006281;DNA repair;5.71461827213192e-07!GO:0015078;hydrogen ion transmembrane transporter activity;6.00845214415967e-07!GO:0006366;transcription from RNA polymerase II promoter;6.54240472646732e-07!GO:0009109;coenzyme catabolic process;6.75660134454876e-07!GO:0015630;microtubule cytoskeleton;6.79518452500559e-07!GO:0003714;transcription corepressor activity;7.46393568587681e-07!GO:0009719;response to endogenous stimulus;7.70475019124689e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;7.90897726013231e-07!GO:0004812;aminoacyl-tRNA ligase activity;7.90897726013231e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;7.90897726013231e-07!GO:0051188;cofactor biosynthetic process;9.1600994965988e-07!GO:0043038;amino acid activation;9.29875064820979e-07!GO:0006418;tRNA aminoacylation for protein translation;9.29875064820979e-07!GO:0043039;tRNA aminoacylation;9.29875064820979e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.04234979773387e-06!GO:0006323;DNA packaging;1.28744238057445e-06!GO:0005798;Golgi-associated vesicle;1.49284488578276e-06!GO:0006084;acetyl-CoA metabolic process;1.74202365610816e-06!GO:0016564;transcription repressor activity;1.74589832344665e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.58060319864737e-06!GO:0006916;anti-apoptosis;2.80878576430896e-06!GO:0006333;chromatin assembly or disassembly;3.59692078036724e-06!GO:0065004;protein-DNA complex assembly;4.14168499973523e-06!GO:0045786;negative regulation of progression through cell cycle;4.34151199036889e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.16405411428708e-06!GO:0015980;energy derivation by oxidation of organic compounds;5.41337882694364e-06!GO:0065002;intracellular protein transport across a membrane;5.46352761508465e-06!GO:0005643;nuclear pore;5.46352761508465e-06!GO:0009117;nucleotide metabolic process;5.72052733342774e-06!GO:0006752;group transfer coenzyme metabolic process;5.81656682757643e-06!GO:0000139;Golgi membrane;6.10285507954082e-06!GO:0016853;isomerase activity;6.32237252224229e-06!GO:0006613;cotranslational protein targeting to membrane;6.70796483511181e-06!GO:0005773;vacuole;7.32995883048324e-06!GO:0051789;response to protein stimulus;7.90837411469676e-06!GO:0006986;response to unfolded protein;7.90837411469676e-06!GO:0051170;nuclear import;8.25254657319167e-06!GO:0004298;threonine endopeptidase activity;8.33318974638534e-06!GO:0000151;ubiquitin ligase complex;9.37416208283616e-06!GO:0006793;phosphorus metabolic process;9.68128816498187e-06!GO:0006796;phosphate metabolic process;9.68128816498187e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.02902374115049e-05!GO:0005667;transcription factor complex;1.11896241888088e-05!GO:0000279;M phase;1.18088763889815e-05!GO:0016310;phosphorylation;1.21925259101736e-05!GO:0006260;DNA replication;1.23046863234343e-05!GO:0045454;cell redox homeostasis;1.28751917496672e-05!GO:0006606;protein import into nucleus;1.33585628771034e-05!GO:0009108;coenzyme biosynthetic process;1.38881039477035e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.48116996393483e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.56339490117322e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.57075273932835e-05!GO:0046930;pore complex;1.65174089969284e-05!GO:0016859;cis-trans isomerase activity;1.7095943369951e-05!GO:0044440;endosomal part;1.7095943369951e-05!GO:0010008;endosome membrane;1.7095943369951e-05!GO:0008361;regulation of cell size;1.7254318596815e-05!GO:0005905;coated pit;1.79454714747803e-05!GO:0005525;GTP binding;1.81691763385141e-05!GO:0030867;rough endoplasmic reticulum membrane;1.94244016167671e-05!GO:0016049;cell growth;1.95474565459777e-05!GO:0032446;protein modification by small protein conjugation;2.12925648572442e-05!GO:0045259;proton-transporting ATP synthase complex;2.28473916015476e-05!GO:0031252;leading edge;2.54041685623503e-05!GO:0000785;chromatin;2.56551565166235e-05!GO:0044262;cellular carbohydrate metabolic process;2.56551565166235e-05!GO:0005819;spindle;2.57960117292098e-05!GO:0016567;protein ubiquitination;2.59256032811261e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.82932802401691e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.03665312906276e-05!GO:0048522;positive regulation of cellular process;3.37957432287724e-05!GO:0000323;lytic vacuole;3.46443984254914e-05!GO:0005764;lysosome;3.46443984254914e-05!GO:0006612;protein targeting to membrane;3.5772723212101e-05!GO:0030133;transport vesicle;3.6924732647572e-05!GO:0001558;regulation of cell growth;3.6924732647572e-05!GO:0000245;spliceosome assembly;3.74032405793379e-05!GO:0005048;signal sequence binding;3.95282448711242e-05!GO:0003697;single-stranded DNA binding;4.01296296903696e-05!GO:0006334;nucleosome assembly;4.3246427127369e-05!GO:0003676;nucleic acid binding;4.65400445374131e-05!GO:0003724;RNA helicase activity;4.94257285793434e-05!GO:0016740;transferase activity;5.1569067505172e-05!GO:0031324;negative regulation of cellular metabolic process;5.54546120430712e-05!GO:0050657;nucleic acid transport;5.58781365007906e-05!GO:0051236;establishment of RNA localization;5.58781365007906e-05!GO:0050658;RNA transport;5.58781365007906e-05!GO:0006403;RNA localization;6.20281386504824e-05!GO:0043623;cellular protein complex assembly;6.76883608471393e-05!GO:0019843;rRNA binding;6.89721562608709e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.89721562608709e-05!GO:0007005;mitochondrion organization and biogenesis;7.19375733414194e-05!GO:0005813;centrosome;8.22744291932898e-05!GO:0003713;transcription coactivator activity;8.43596972540572e-05!GO:0006364;rRNA processing;9.2104188814271e-05!GO:0008654;phospholipid biosynthetic process;9.35153712278605e-05!GO:0043566;structure-specific DNA binding;9.47496244443457e-05!GO:0032561;guanyl ribonucleotide binding;9.55737651732995e-05!GO:0019001;guanyl nucleotide binding;9.55737651732995e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.60943818424378e-05!GO:0015399;primary active transmembrane transporter activity;9.60943818424378e-05!GO:0005791;rough endoplasmic reticulum;9.99179908388699e-05!GO:0030029;actin filament-based process;0.000105359203935476!GO:0005769;early endosome;0.000105969715991653!GO:0031968;organelle outer membrane;0.000119734098055162!GO:0007243;protein kinase cascade;0.000119957819378027!GO:0007010;cytoskeleton organization and biogenesis;0.000129846246304497!GO:0033116;ER-Golgi intermediate compartment membrane;0.000132076764150887!GO:0016072;rRNA metabolic process;0.000134301248328072!GO:0005762;mitochondrial large ribosomal subunit;0.000140879095421797!GO:0000315;organellar large ribosomal subunit;0.000140879095421797!GO:0019867;outer membrane;0.000153060406228034!GO:0005815;microtubule organizing center;0.000155581564488991!GO:0016563;transcription activator activity;0.000160658359850389!GO:0031497;chromatin assembly;0.000187175680441403!GO:0005770;late endosome;0.000195423072321889!GO:0016044;membrane organization and biogenesis;0.000239198676820443!GO:0043021;ribonucleoprotein binding;0.000250514530499617!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000250897735825414!GO:0004576;oligosaccharyl transferase activity;0.000271664154948364!GO:0008250;oligosaccharyl transferase complex;0.000312197097134549!GO:0051329;interphase of mitotic cell cycle;0.000358491623824682!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000372301076603628!GO:0016568;chromatin modification;0.000398627051672419!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000421048118883803!GO:0048518;positive regulation of biological process;0.000427023603172135!GO:0005885;Arp2/3 protein complex;0.000427621407260853!GO:0005741;mitochondrial outer membrane;0.00046047080983604!GO:0009892;negative regulation of metabolic process;0.000503269895027161!GO:0000314;organellar small ribosomal subunit;0.000511927538473431!GO:0005763;mitochondrial small ribosomal subunit;0.000511927538473431!GO:0043492;ATPase activity, coupled to movement of substances;0.000540611417388226!GO:0030659;cytoplasmic vesicle membrane;0.000592144656914088!GO:0051325;interphase;0.000643698049060892!GO:0006950;response to stress;0.000649070738053827!GO:0018196;peptidyl-asparagine modification;0.000652151227486124!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000652151227486124!GO:0030663;COPI coated vesicle membrane;0.000705294508319379!GO:0030126;COPI vesicle coat;0.000705294508319379!GO:0008092;cytoskeletal protein binding;0.000722092899985045!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000722823245729956!GO:0040008;regulation of growth;0.000729783426192893!GO:0051920;peroxiredoxin activity;0.000819269345209358!GO:0016070;RNA metabolic process;0.000867265202703355!GO:0051028;mRNA transport;0.000878914260560066!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000923568168498733!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00103333878169141!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00108210253869189!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00108843546193514!GO:0008186;RNA-dependent ATPase activity;0.00108957021536188!GO:0016779;nucleotidyltransferase activity;0.00112268226504677!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00126880828496482!GO:0030137;COPI-coated vesicle;0.00127970646424261!GO:0006892;post-Golgi vesicle-mediated transport;0.00134493513644196!GO:0007051;spindle organization and biogenesis;0.00142573134398568!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00145104382096483!GO:0030132;clathrin coat of coated pit;0.00146611802949926!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00157601341393317!GO:0051427;hormone receptor binding;0.00157601341393317!GO:0048471;perinuclear region of cytoplasm;0.00161779422041647!GO:0044433;cytoplasmic vesicle part;0.00163263249193511!GO:0003729;mRNA binding;0.00173198939282805!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00183065232464346!GO:0030658;transport vesicle membrane;0.0018588600401869!GO:0019752;carboxylic acid metabolic process;0.00196325668740052!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00203137924485936!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00203137924485936!GO:0042802;identical protein binding;0.0020412359596766!GO:0030118;clathrin coat;0.00210859848954752!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00210859848954752!GO:0006082;organic acid metabolic process;0.00213975359656707!GO:0065009;regulation of a molecular function;0.00216401092524135!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00218329829543685!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00218329829543685!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00218329829543685!GO:0006818;hydrogen transport;0.00220274459998039!GO:0004177;aminopeptidase activity;0.0022658183418182!GO:0015992;proton transport;0.00227752659911023!GO:0043681;protein import into mitochondrion;0.00228695536377911!GO:0019899;enzyme binding;0.00235778066112181!GO:0022890;inorganic cation transmembrane transporter activity;0.00249372978734169!GO:0009165;nucleotide biosynthetic process;0.0025445990485161!GO:0048500;signal recognition particle;0.00260264457392082!GO:0035257;nuclear hormone receptor binding;0.00284249706063235!GO:0046474;glycerophospholipid biosynthetic process;0.00286876739806079!GO:0045792;negative regulation of cell size;0.00290071162243342!GO:0004004;ATP-dependent RNA helicase activity;0.00290071162243342!GO:0006118;electron transport;0.0029457259094158!GO:0030308;negative regulation of cell growth;0.00295862039765379!GO:0016197;endosome transport;0.00295862039765379!GO:0012506;vesicle membrane;0.00327501980962016!GO:0045045;secretory pathway;0.00332525188136383!GO:0048487;beta-tubulin binding;0.00349758839536102!GO:0030134;ER to Golgi transport vesicle;0.00381037336028721!GO:0008632;apoptotic program;0.0038812559485607!GO:0006891;intra-Golgi vesicle-mediated transport;0.00419458687219885!GO:0046489;phosphoinositide biosynthetic process;0.00428159730903537!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00439113799223345!GO:0031418;L-ascorbic acid binding;0.00462652977074213!GO:0031543;peptidyl-proline dioxygenase activity;0.00465489080448535!GO:0046483;heterocycle metabolic process;0.00470992201301792!GO:0051287;NAD binding;0.00470992201301792!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00470992201301792!GO:0051168;nuclear export;0.0047209231518264!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00474668105972888!GO:0045047;protein targeting to ER;0.00474668105972888!GO:0030660;Golgi-associated vesicle membrane;0.00478523142679434!GO:0030176;integral to endoplasmic reticulum membrane;0.00478523142679434!GO:0015631;tubulin binding;0.00481582387954179!GO:0003899;DNA-directed RNA polymerase activity;0.00502842608359253!GO:0016363;nuclear matrix;0.005100980395756!GO:0030027;lamellipodium;0.00518122209806753!GO:0008312;7S RNA binding;0.00527021954737664!GO:0006979;response to oxidative stress;0.00534615442048596!GO:0016481;negative regulation of transcription;0.0053686898259593!GO:0008139;nuclear localization sequence binding;0.00545011087754203!GO:0007006;mitochondrial membrane organization and biogenesis;0.00556420487178072!GO:0001666;response to hypoxia;0.00564162720717303!GO:0031072;heat shock protein binding;0.0056844623891419!GO:0017166;vinculin binding;0.0056844623891419!GO:0000075;cell cycle checkpoint;0.00573510634206293!GO:0005581;collagen;0.00591476988849592!GO:0031901;early endosome membrane;0.0062332576629378!GO:0006740;NADPH regeneration;0.0062332576629378!GO:0006098;pentose-phosphate shunt;0.0062332576629378!GO:0006402;mRNA catabolic process;0.00634965946300498!GO:0006509;membrane protein ectodomain proteolysis;0.00648283381626291!GO:0033619;membrane protein proteolysis;0.00648283381626291!GO:0030125;clathrin vesicle coat;0.00705154799981674!GO:0030665;clathrin coated vesicle membrane;0.00705154799981674!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00707562081468824!GO:0007050;cell cycle arrest;0.00708750309797273!GO:0050794;regulation of cellular process;0.00713139187612773!GO:0051252;regulation of RNA metabolic process;0.00724241510546757!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00724754964897906!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00724754964897906!GO:0043488;regulation of mRNA stability;0.00724754964897906!GO:0043487;regulation of RNA stability;0.00724754964897906!GO:0007264;small GTPase mediated signal transduction;0.00744850494647989!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00764701741587609!GO:0015002;heme-copper terminal oxidase activity;0.00764701741587609!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00764701741587609!GO:0004129;cytochrome-c oxidase activity;0.00764701741587609!GO:0006007;glucose catabolic process;0.00826589320706438!GO:0000082;G1/S transition of mitotic cell cycle;0.00827878031638297!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0085057382210184!GO:0003711;transcription elongation regulator activity;0.0087198182239758!GO:0008180;signalosome;0.00886877411284475!GO:0007040;lysosome organization and biogenesis;0.00903496783998137!GO:0030119;AP-type membrane coat adaptor complex;0.00906838033909596!GO:0030127;COPII vesicle coat;0.00909917579783277!GO:0012507;ER to Golgi transport vesicle membrane;0.00909917579783277!GO:0009967;positive regulation of signal transduction;0.00911408445405209!GO:0004674;protein serine/threonine kinase activity;0.00912060971072627!GO:0051540;metal cluster binding;0.00963230490064192!GO:0051536;iron-sulfur cluster binding;0.00963230490064192!GO:0000776;kinetochore;0.00994941141428843!GO:0043284;biopolymer biosynthetic process;0.0100945132438491!GO:0008047;enzyme activator activity;0.0103395205947792!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0104793838533294!GO:0035258;steroid hormone receptor binding;0.0105924098267785!GO:0019798;procollagen-proline dioxygenase activity;0.0109420533849816!GO:0000775;chromosome, pericentric region;0.0112150775969163!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0112360371991721!GO:0050662;coenzyme binding;0.0117172044593481!GO:0000059;protein import into nucleus, docking;0.0117214085500829!GO:0045926;negative regulation of growth;0.0118737068899196!GO:0005862;muscle thin filament tropomyosin;0.0120438220545425!GO:0003746;translation elongation factor activity;0.0122604302521764!GO:0030041;actin filament polymerization;0.0123685333916008!GO:0045941;positive regulation of transcription;0.0126276947616531!GO:0006626;protein targeting to mitochondrion;0.0126276947616531!GO:0005869;dynactin complex;0.0130454001215445!GO:0006595;polyamine metabolic process;0.0130454001215445!GO:0032940;secretion by cell;0.0133728983687081!GO:0005975;carbohydrate metabolic process;0.0135663698870517!GO:0051087;chaperone binding;0.0135710251559998!GO:0030521;androgen receptor signaling pathway;0.0136048711746634!GO:0046467;membrane lipid biosynthetic process;0.0139849521573889!GO:0048468;cell development;0.0139881194348584!GO:0008154;actin polymerization and/or depolymerization;0.0146275536828438!GO:0051128;regulation of cellular component organization and biogenesis;0.0146442277252436!GO:0008234;cysteine-type peptidase activity;0.0149090331159863!GO:0006383;transcription from RNA polymerase III promoter;0.0149392152037627!GO:0006401;RNA catabolic process;0.0151422320990582!GO:0006839;mitochondrial transport;0.0152958551525171!GO:0033673;negative regulation of kinase activity;0.0153654625341227!GO:0006469;negative regulation of protein kinase activity;0.0153654625341227!GO:0004197;cysteine-type endopeptidase activity;0.0154859681449732!GO:0005586;collagen type III;0.0162731141680581!GO:0006672;ceramide metabolic process;0.0164347001277555!GO:0030131;clathrin adaptor complex;0.0168161376048125!GO:0030032;lamellipodium biogenesis;0.0168161376048125!GO:0000786;nucleosome;0.0168296949772075!GO:0003779;actin binding;0.0168416970184527!GO:0006414;translational elongation;0.0169274737541127!GO:0009112;nucleobase metabolic process;0.0169280784545058!GO:0005874;microtubule;0.0172003560358036!GO:0051052;regulation of DNA metabolic process;0.0172897614594426!GO:0016860;intramolecular oxidoreductase activity;0.0174820665002872!GO:0016251;general RNA polymerase II transcription factor activity;0.0178303564201582!GO:0005684;U2-dependent spliceosome;0.0183455995560554!GO:0051348;negative regulation of transferase activity;0.0184756497473034!GO:0007033;vacuole organization and biogenesis;0.0186815683368918!GO:0007030;Golgi organization and biogenesis;0.0187518764625881!GO:0006497;protein amino acid lipidation;0.0188830052973625!GO:0016272;prefoldin complex;0.0191526040249203!GO:0008610;lipid biosynthetic process;0.0192835663881506!GO:0043433;negative regulation of transcription factor activity;0.0193013443167423!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0193215024865713!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0193215024865713!GO:0003690;double-stranded DNA binding;0.0195794001266889!GO:0006984;ER-nuclear signaling pathway;0.0198025858768697!GO:0006739;NADP metabolic process;0.0200026741446655!GO:0051101;regulation of DNA binding;0.0207219302017399!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0209528557775577!GO:0005637;nuclear inner membrane;0.0212095055906207!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0213147733465484!GO:0019318;hexose metabolic process;0.021354889708533!GO:0045893;positive regulation of transcription, DNA-dependent;0.0217032574139896!GO:0006897;endocytosis;0.0217344503437301!GO:0010324;membrane invagination;0.0217344503437301!GO:0043022;ribosome binding;0.0220247760105633!GO:0031124;mRNA 3'-end processing;0.0224411665715066!GO:0006650;glycerophospholipid metabolic process;0.0229825618293926!GO:0006354;RNA elongation;0.0232194283753446!GO:0005996;monosaccharide metabolic process;0.0233001658523052!GO:0030145;manganese ion binding;0.0233219288700085!GO:0031529;ruffle organization and biogenesis;0.0233716741227758!GO:0003756;protein disulfide isomerase activity;0.0237139268932508!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0237139268932508!GO:0000049;tRNA binding;0.0237139268932508!GO:0022415;viral reproductive process;0.0238655683077745!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0242036889967608!GO:0032984;macromolecular complex disassembly;0.024391864295266!GO:0030833;regulation of actin filament polymerization;0.0248636213168855!GO:0006417;regulation of translation;0.0249438083177188!GO:0043065;positive regulation of apoptosis;0.0251524259329658!GO:0031625;ubiquitin protein ligase binding;0.0253204615931161!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0253390495060905!GO:0000910;cytokinesis;0.0256717552185777!GO:0003682;chromatin binding;0.0260747279360685!GO:0050811;GABA receptor binding;0.0263516442264782!GO:0000339;RNA cap binding;0.0264508196917899!GO:0006378;mRNA polyadenylation;0.0264508196917899!GO:0001527;microfibril;0.0266551714433097!GO:0005832;chaperonin-containing T-complex;0.0273094237142501!GO:0007052;mitotic spindle organization and biogenesis;0.0284365740201881!GO:0044420;extracellular matrix part;0.0286418830972318!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0289399002104084!GO:0030880;RNA polymerase complex;0.0289681463826898!GO:0016584;nucleosome positioning;0.0299598953814322!GO:0043068;positive regulation of programmed cell death;0.0304433814649605!GO:0046519;sphingoid metabolic process;0.030828687378497!GO:0035035;histone acetyltransferase binding;0.0308684638259143!GO:0050681;androgen receptor binding;0.0309261316867793!GO:0030518;steroid hormone receptor signaling pathway;0.0314785420694312!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.031627013425386!GO:0033043;regulation of organelle organization and biogenesis;0.031627013425386!GO:0000118;histone deacetylase complex;0.0318727577039033!GO:0004287;prolyl oligopeptidase activity;0.032748269176528!GO:0006261;DNA-dependent DNA replication;0.0330609019667676!GO:0008147;structural constituent of bone;0.0330625397478102!GO:0003678;DNA helicase activity;0.0335098953299827!GO:0006520;amino acid metabolic process;0.0343863622494691!GO:0009889;regulation of biosynthetic process;0.0348888859425829!GO:0007034;vacuolar transport;0.0353486486466082!GO:0007242;intracellular signaling cascade;0.0355907808213926!GO:0030384;phosphoinositide metabolic process;0.0365886361750613!GO:0031272;regulation of pseudopodium formation;0.036778943981509!GO:0031269;pseudopodium formation;0.036778943981509!GO:0031344;regulation of cell projection organization and biogenesis;0.036778943981509!GO:0031268;pseudopodium organization and biogenesis;0.036778943981509!GO:0031346;positive regulation of cell projection organization and biogenesis;0.036778943981509!GO:0031274;positive regulation of pseudopodium formation;0.036778943981509!GO:0022411;cellular component disassembly;0.0370227143199635!GO:0001872;zymosan binding;0.0370227143199635!GO:0001878;response to yeast;0.0370227143199635!GO:0008538;proteasome activator activity;0.0370227143199635!GO:0022408;negative regulation of cell-cell adhesion;0.0371571606629056!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0372754852069004!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0372754852069004!GO:0007093;mitotic cell cycle checkpoint;0.037342240631818!GO:0005784;translocon complex;0.0373644960406813!GO:0048037;cofactor binding;0.0377623210412883!GO:0043241;protein complex disassembly;0.0385503323542634!GO:0003923;GPI-anchor transamidase activity;0.0386040228447846!GO:0016255;attachment of GPI anchor to protein;0.0386040228447846!GO:0042765;GPI-anchor transamidase complex;0.0386040228447846!GO:0006506;GPI anchor biosynthetic process;0.0387153896819394!GO:0043086;negative regulation of catalytic activity;0.0401614341184656!GO:0051235;maintenance of localization;0.0401803622219473!GO:0008033;tRNA processing;0.0403842406083494!GO:0045936;negative regulation of phosphate metabolic process;0.0403938757935739!GO:0050790;regulation of catalytic activity;0.0408838579019675!GO:0006607;NLS-bearing substrate import into nucleus;0.041538752747489!GO:0006352;transcription initiation;0.0415825547835499!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0419608766286037!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0423224352496717!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0426279601042147!GO:0006376;mRNA splice site selection;0.0427103912393506!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0427103912393506!GO:0005657;replication fork;0.042721954697671!GO:0006778;porphyrin metabolic process;0.0438448276183822!GO:0033013;tetrapyrrole metabolic process;0.0438448276183822!GO:0030508;thiol-disulfide exchange intermediate activity;0.0439355554959508!GO:0031371;ubiquitin conjugating enzyme complex;0.0447162275631707!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0451806265424089!GO:0006505;GPI anchor metabolic process;0.0456069807272618!GO:0042158;lipoprotein biosynthetic process;0.0456674380716549!GO:0030503;regulation of cell redox homeostasis;0.045917645382274!GO:0006302;double-strand break repair;0.0459626929118944!GO:0006518;peptide metabolic process;0.0459626929118944!GO:0030140;trans-Golgi network transport vesicle;0.0461483748244106!GO:0031326;regulation of cellular biosynthetic process;0.0461526562896146!GO:0051098;regulation of binding;0.0462993584190718!GO:0006693;prostaglandin metabolic process;0.0462993584190718!GO:0006692;prostanoid metabolic process;0.0462993584190718!GO:0001726;ruffle;0.0468424931935401!GO:0006405;RNA export from nucleus;0.0469325535915578!GO:0042168;heme metabolic process;0.0472721898699935!GO:0032507;maintenance of cellular protein localization;0.0483418033252755!GO:0043624;cellular protein complex disassembly;0.0483764907301244!GO:0016301;kinase activity;0.0489565167883569!GO:0008238;exopeptidase activity;0.0489565167883569!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0490123205179003!GO:0000428;DNA-directed RNA polymerase complex;0.0490123205179003
|sample_id=11255
|sample_note=machine failed, remainder reloaded, low amount
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=testis
|top_motifs=NKX2-2,8:1.75522376996;TAL1_TCF{3,4,12}:1.7527429205;EN1,2:1.66442914165;TEAD1:1.46322372316;PAX1,9:1.43400274736;HIF1A:1.40937999368;HOX{A5,B5}:1.31026161301;NFATC1..3:1.31025027492;GLI1..3:1.29440201307;RXRA_VDR{dimer}:1.2711117173;HAND1,2:1.22943095572;MYBL2:1.21013430348;NR3C1:1.16417030016;GZF1:1.16069325969;ZNF238:1.10908292333;CDC5L:1.10433039886;HMGA1,2:1.04476870435;TFAP4:1.04277245476;NFE2L1:0.991408172718;UFEwm:0.978826031405;SRF:0.978443771049;NFIX:0.964722768193;HSF1,2:0.951042270736;IKZF1:0.927167599446;ESRRA:0.912390806269;FOXL1:0.887074508214;FOXD3:0.883167950828;TBP:0.857156430079;MAFB:0.855925348161;TP53:0.85369104509;ADNP_IRX_SIX_ZHX:0.8393179136;ZNF384:0.831881545608;POU5F1:0.828143657314;HLF:0.76791932176;EBF1:0.741784504659;PAX6:0.735537380885;PAX4:0.735372690582;TBX4,5:0.730017447358;ALX4:0.721342166554;HES1:0.710511394133;TEF:0.69222127237;KLF4:0.687969054067;LEF1_TCF7_TCF7L1,2:0.671683573401;GFI1B:0.666056513553;ZNF148:0.650118311501;GTF2A1,2:0.63982712955;GCM1,2:0.638880974377;NKX3-1:0.638182337203;STAT2,4,6:0.595476344734;ZNF423:0.593942141667;HMX1:0.583121199245;MTE{core}:0.579176224489;NFE2L2:0.558838966636;EVI1:0.534993726727;GTF2I:0.527830239062;ESR1:0.52592639984;NR6A1:0.519209468048;PPARG:0.514287163855;LHX3,4:0.514250372735;HOX{A4,D4}:0.499761251598;TLX1..3_NFIC{dimer}:0.489152118049;PRDM1:0.487704933193;AR:0.462882177224;PAX3,7:0.454628816298;MYFfamily:0.438703895484;CEBPA,B_DDIT3:0.431088329325;RXR{A,B,G}:0.429169126783;LMO2:0.427404795979;TOPORS:0.40682416617;CDX1,2,4:0.396329267671;ZIC1..3:0.357082030434;ATF6:0.353028667427;SMAD1..7,9:0.322686498799;NR5A1,2:0.309580493905;MYB:0.308160025079;FOX{I1,J2}:0.295972304398;FOXP3:0.282316715213;HNF1A:0.280329731486;FOXA2:0.221514289039;AHR_ARNT_ARNT2:0.209496592715;TFCP2:0.193061596611;AIRE:0.186446979935;TFAP2B:0.155926653133;MAZ:0.149722608689;IRF1,2:0.144132449856;FOXO1,3,4:0.144129882841;MZF1:0.129205614711;IRF7:0.118803203942;ZBTB6:0.0940385224756;CRX:0.0880162737749;NANOG{mouse}:0.0826048654428;TLX2:0.069592123182;FOXM1:0.0609238656233;MEF2{A,B,C,D}:0.0607669724694;SPZ1:0.0605769974815;NKX3-2:0.0406125355694;SOX17:0.0388508766375;FOS_FOS{B,L1}_JUN{B,D}:-0.000828262750821;NKX6-1,2:-0.00715754030745;BACH2:-0.0292017959561;RUNX1..3:-0.0383293549415;POU3F1..4:-0.0462208380523;REST:-0.047541626899;ATF2:-0.0510261700522;FOSL2:-0.0577589361937;XCPE1{core}:-0.0577951394149;PATZ1:-0.0613038267976;VSX1,2:-0.0704607249235;RFX1:-0.0725442305141;NHLH1,2:-0.0784050222005;bHLH_family:-0.0916671319754;DBP:-0.0937275543609;SOX2:-0.103152327299;ARID5B:-0.155136590723;TFDP1:-0.158421463818;XBP1:-0.169218249727;FOX{D1,D2}:-0.170477356672;YY1:-0.177096604379;RORA:-0.178627154758;PRRX1,2:-0.184137935408;PAX5:-0.187962089959;ZEB1:-0.199369538051;NFKB1_REL_RELA:-0.208820923337;HNF4A_NR2F1,2:-0.211754916177;NFE2:-0.221501861729;TGIF1:-0.245496603746;RREB1:-0.290237279903;MED-1{core}:-0.303788682608;PAX2:-0.304319206644;MTF1:-0.311182893935;HIC1:-0.323038239574;PBX1:-0.325616537356;NANOG:-0.337885687578;HOXA9_MEIS1:-0.35511051029;ETS1,2:-0.365873635224;POU1F1:-0.366895751713;SNAI1..3:-0.370300044111;T:-0.371097873297;ZBTB16:-0.374605042261;NFIL3:-0.374997418584;NR1H4:-0.391224830286;HBP1_HMGB_SSRP1_UBTF:-0.400757962229;SOX{8,9,10}:-0.42600269677;E2F1..5:-0.433660463594;EP300:-0.435285600851;GATA4:-0.455818686476;SOX5:-0.477872596952;TFAP2{A,C}:-0.478624360994;MYOD1:-0.499505057965;OCT4_SOX2{dimer}:-0.51969568308;POU6F1:-0.520845197122;SPIB:-0.527085525293;FOXP1:-0.542474010137;STAT5{A,B}:-0.543357254569;ATF5_CREB3:-0.552101283227;FOXN1:-0.56170531799;ZFP161:-0.565786778016;GATA6:-0.594665703611;PAX8:-0.599405861005;STAT1,3:-0.603695522168;EGR1..3:-0.63741277727;ONECUT1,2:-0.637735790923;ELK1,4_GABP{A,B1}:-0.644232476834;CUX2:-0.645444285233;DMAP1_NCOR{1,2}_SMARC:-0.645452283646;GFI1:-0.651444624873;ZNF143:-0.658541445645;NRF1:-0.662470310238;FOX{F1,F2,J1}:-0.677523918876;PITX1..3:-0.702051049789;HOX{A6,A7,B6,B7}:-0.710896275747;SPI1:-0.715188502672;BPTF:-0.728277433183;NKX2-1,4:-0.728828898234;RBPJ:-0.748467211242;ATF4:-0.760151807253;SP1:-0.766242044469;JUN:-0.782932695752;FOXQ1:-0.785400974027;ELF1,2,4:-0.877616623121;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.88331031703;NFY{A,B,C}:-0.961828723185;IKZF2:-1.01060646522;ALX1:-1.02476611904;NKX2-3_NKX2-5:-1.04222344899;CREB1:-1.05539262322;POU2F1..3:-1.10319253783;BREu{core}:-1.13626566182;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.20687203565;SREBF1,2:-1.2618125774;PDX1:-1.34471898742;RFX2..5_RFXANK_RFXAP:-1.41195484496
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11255-116F4;search_select_hide=table117:FF:11255-116F4
}}
}}

Latest revision as of 16:28, 3 June 2020

Name:Sertoli Cells, donor1
Species:Human (Homo sapiens)
Library ID:CNhs10851
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuetestis
dev stage23 years old adult
sexmale
age23
cell typesertoli cell
cell lineNA
companyLonza
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberN/A
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005843
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10851 CAGE DRX008450 DRR009322
Accession ID Hg19

Library idBAMCTSS
CNhs10851 DRZ000747 DRZ002132
Accession ID Hg38

Library idBAMCTSS
CNhs10851 DRZ012097 DRZ013482
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005843
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10003.GTAGAG sRNA-Seq DRX037025 DRR041391
Accession ID Hg19

Library idBAMCTSS
SRhi10003.GTAGAG DRZ007033


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.117
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.155
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.625
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0842
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.163
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.416
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.129
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.125
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.143
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.416
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0202
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0322
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.059
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.625
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.625
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic1.088
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.765
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.416
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10851

Jaspar motifP-value
MA0002.20.568
MA0003.10.423
MA0004.10.109
MA0006.10.469
MA0007.10.157
MA0009.10.401
MA0014.10.314
MA0017.10.303
MA0018.21.53121e-6
MA0019.10.397
MA0024.12.2918e-4
MA0025.10.0793
MA0027.10.987
MA0028.16.00347e-4
MA0029.10.85
MA0030.10.279
MA0031.10.293
MA0035.20.656
MA0038.10.00619
MA0039.20.0457
MA0040.10.371
MA0041.10.421
MA0042.10.979
MA0043.10.00324
MA0046.10.811
MA0047.20.444
MA0048.10.906
MA0050.10.422
MA0051.10.928
MA0052.10.429
MA0055.10.255
MA0057.10.194
MA0058.10.0125
MA0059.10.888
MA0060.11.98668e-9
MA0061.10.627
MA0062.24.46511e-10
MA0065.20.198
MA0066.10.194
MA0067.10.001
MA0068.10.325
MA0069.10.353
MA0070.10.653
MA0071.10.532
MA0072.10.638
MA0073.10.632
MA0074.10.474
MA0076.14.41584e-5
MA0077.10.83
MA0078.10.517
MA0079.20.471
MA0080.21.36181e-7
MA0081.10.00348
MA0083.10.0248
MA0084.10.694
MA0087.10.778
MA0088.10.789
MA0090.11.20374e-7
MA0091.10.00779
MA0092.10.0059
MA0093.10.0658
MA0099.20.371
MA0100.10.287
MA0101.10.26
MA0102.20.295
MA0103.10.747
MA0104.20.11
MA0105.10.0299
MA0106.10.00605
MA0107.10.385
MA0108.20.0117
MA0111.10.557
MA0112.26.43814e-5
MA0113.10.15
MA0114.10.772
MA0115.10.592
MA0116.10.0153
MA0117.10.994
MA0119.10.0363
MA0122.10.0759
MA0124.10.615
MA0125.10.491
MA0131.10.434
MA0135.10.0298
MA0136.12.98373e-9
MA0137.20.443
MA0138.20.515
MA0139.10.905
MA0140.10.757
MA0141.10.357
MA0142.10.579
MA0143.10.12
MA0144.10.772
MA0145.10.125
MA0146.10.808
MA0147.10.606
MA0148.10.697
MA0149.10.149
MA0150.10.609
MA0152.10.00585
MA0153.10.324
MA0154.10.0173
MA0155.10.376
MA0156.19.91965e-6
MA0157.10.714
MA0159.10.166
MA0160.10.924
MA0162.10.0457
MA0163.16.27336e-5
MA0164.10.594
MA0258.10.00506
MA0259.10.843



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10851

Novel motifP-value
10.124
100.638
1000.696
1010.735
1020.126
1030.082
1040.791
1050.806
1060.0231
1070.0267
1080.373
1090.157
110.285
1100.246
1110.973
1120.468
1130.194
1140.0927
1150.368
1160.0719
1170.739
1180.972
1190.263
120.362
1200.901
1210.817
1220.504
1230.158
1240.532
1250.768
1260.983
1270.895
1280.0476
1290.385
130.677
1300.384
1310.0723
1320.716
1330.789
1340.12
1350.146
1360.508
1370.653
1380.581
1390.566
140.866
1400.442
1410.539
1420.584
1430.048
1440.705
1450.362
1460.584
1470.183
1480.445
1491.6355e-4
150.175
1500.383
1510.415
1520.122
1530.158
1540.86
1550.216
1560.46
1570.888
1580.0771
1590.411
160.026
1600.141
1610.245
1620.83
1630.514
1640.212
1650.992
1660.0733
1670.566
1680.859
1690.0339
170.22
180.0435
190.0356
20.144
200.327
210.148
220.191
230.0204
240.673
250.798
260.0933
270.158
280.436
290.723
30.251
300.402
310.521
321.0594e-11
330.435
340.604
350.214
360.401
370.211
380.83
390.213
40.949
400.749
410.407
420.513
430.302
440.681
450.433
460.0637
470.443
480.471
490.297
50.307
500.534
510.916
520.132
530.871
540.532
550.0934
560.782
570.269
580.789
590.0752
60.643
600.112
610.521
620.192
630.179
640.557
650.227
660.99
670.123
680.974
690.445
70.921
700.104
710.0742
720.714
730.251
740.00924
750.325
760.755
770.00838
780.532
790.0112
80.0467
800.754
810.27
820.24
830.4
840.975
850.0355
860.519
870.797
880.456
890.046
90.387
900.171
910.53
920.124
930.516
940.152
950.452
960.318
970.171
980.888
990.00427



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10851


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000511 (androgen binding protein secreting cell)
0000630 (supportive cell)
0002625 (seminiferous tubule epithelial cell)
0000154 (protein secreting cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)
0000216 (Sertoli cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000473 (testis)
0001136 (mesothelium)
0000483 (epithelium)
0000991 (gonad)
0001343 (seminiferous tubule of testis)
0000479 (tissue)
0000058 (duct)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0003133 (reproductive organ)
0005904 (duct of male reproductive system)
0000487 (simple squamous epithelium)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0004910 (epithelium of male gonad)
0004909 (epithelium of gonad)
0004813 (seminiferous tubule epithelium)
0003101 (male organism)
0000079 (male reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000161 (human sertoli cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)

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