FF:11420-118F7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005852 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005852 | ||
|accession_numbers=CAGE;DRX008298;DRR009170;DRZ000595;DRZ001980;DRZ011945;DRZ013330 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037051;DRR041417;DRZ007059 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001003,UBERON:0002097,UBERON:0002199,UBERON:0002073,UBERON:0000483,UBERON:0002384,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0004923,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003102,UBERON:0007376,UBERON:0010371,UBERON:0010317,UBERON:0000412,UBERON:0002067,UBERON:0001992,UBERON:0002416 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002559,CL:0000346,CL:1000428 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000072,FF:0000001,FF:0000071 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr20:55204351..55204377,+!p1@TFAP2C!2.11!161.62!TFAP2C;;chr7:19157248..19157268,-!p1@TWIST1!1.85!186.48!TWIST1;;chr9:132427883..132427951,+!p2@PRRX2!1.78!59.40!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.75!71.83!PRRX2;;chr6:34204921..34204939,+!p3@HMGA1!1.70!1403.45!HMGA1;;chr11:65686802..65686818,+!p6@DRAP1!1.54!58.02!DRAP1;;chr4:81118647..81118666,+!p1@PRDM8!1.53!42.82!PRDM8;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.53!33.15!ZBED1;;chr11:46299199..46299233,+!p1@CREB3L1!1.48!146.42!CREB3L1;;chr1:170632285..170632309,+!p1@PRRX1!1.48!33.15!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.35!29.01!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.33!55.25!OSR1;;chr2:119605214..119605230,-!p1@EN1!1.31!19.34!EN1;;chr3:147127142..147127168,+!p1@ZIC1!1.31!19.34!ZIC1;;chr5:72744594..72744609,-!p1@FOXD1!1.30!84.26!FOXD1;;chr5:321810..321877,+!p1@AHRR!1.27!55.25!AHRR;;chr11:65667846..65667868,-!p1@FOSL1!1.25!426.84!FOSL1;;chr12:53614115..53614154,-!p1@RARG!1.24!87.03!RARG;;chr1:25256756..25256774,-!p1@RUNX3!1.24!30.39!RUNX3;;chr3:147127177..147127194,+!p2@ZIC1!1.24!16.58!ZIC1;;chr11:65686732..65686756,+!p2@DRAP1!1.21!63.54!DRAP1;;chr1:170633262..170633285,+!p3@PRRX1!1.19!16.58!PRRX1;;chr11:65667884..65667895,-!p2@FOSL1!1.18!53.87!FOSL1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.18!15.19!GLIS1;;chr11:65687362..65687436,+!p3@DRAP1!1.16!60.78!DRAP1;;chr11:46299539..46299620,+!p2@CREB3L1!1.12!20.72!CREB3L1;;chr6:34204973..34204990,+!p4@HMGA1!1.10!154.71!HMGA1;;chr3:157823517..157823562,-!p1@SHOX2!1.10!12.43!SHOX2;;chr4:4861385..4861398,+!p1@MSX1!1.08!33.15!MSX1;;chr11:44331576..44331650,-!p1@ALX4!1.08!11.05!ALX4;;chr5:2751762..2751784,-!p1@IRX2!1.08!11.05!IRX2;;chr1:170632250..170632277,+!p7@PRRX1!1.08!11.05!PRRX1;;chr11:65687222..65687240,+!p7@DRAP1!1.07!13.81!DRAP1;;chr17:46622440..46622477,-!p5@HOXB2!1.04!11.05!HOXB2;;chr2:102091566..102091581,-!p1@RFX8!1.03!9.67!RFX8;;chr5:174151612..174151633,+!p2@MSX2!1.03!9.67!MSX2;;chr17:46622205..46622218,-!p3@HOXB2!1.02!11.05!HOXB2;;chr2:239756671..239756732,+!p1@TWIST2!1.01!30.39!TWIST2;;chr17:59477233..59477263,+!p1@TBX2!1.01!29.01!TBX2;;chr17:41622925..41622976,-!p3@ETV4!1.01!13.81!ETV4;;chr8:49833948..49833973,-!p2@SNAI2!1.00!58.02!SNAI2;;chr19:31840130..31840160,-!p2@TSHZ3!0.99!13.81!TSHZ3;;chr11:46299186..46299195,+!p3@CREB3L1!0.98!9.67!CREB3L1;;chr6:34204672..34204692,+!p1@HMGA1!0.97!958.66!HMGA1;;chr15:83953397..83953425,-!p1@BNC1!0.97!9.67!BNC1;;chr2:176994919..176994931,+!p2@HOXD8!0.97!8.29!HOXD8;;chr2:96012397..96012417,+!p3@KCNIP3!0.97!8.29!KCNIP3;;chr3:147111198..147111225,+!p4@ZIC1!0.97!8.29!ZIC1;;chr9:35732647..35732678,+!p2@CREB3!0.96!46.97!CREB3;;chr16:86544113..86544145,+!p1@FOXF1!0.94!9.67!FOXF1;;chr10:77161133..77161176,-!p3@ZNF503!0.93!16.58!ZNF503;;chr20:42543506..42543549,+!p2@TOX2!0.92!17.96!TOX2;;chr5:72744445..72744466,-!p2@FOXD1!0.92!12.43!FOXD1;;chr2:239756739..239756755,+!p2@TWIST2!0.91!12.43!TWIST2;;chr5:134369905..134369972,-!p1@PITX1!0.91!11.05!PITX1;;chr17:46675420..46675465,-!p3@HOXB6!0.91!8.29!HOXB6;;chr16:31076332..31076388,-!p3@ZNF668!0.90!6.91!ZNF668;;chr5:3595977..3595999,+!p1@IRX1!0.90!6.91!IRX1;;chr7:35293685..35293718,-!p1@TBX20!0.90!6.91!TBX20;;chr1:170633058..170633084,+!p5@PRRX1!0.90!6.91!PRRX1;;chr2:114036488..114036504,-!p1@PAX8!0.90!6.91!PAX8;;chr2:176994408..176994492,+!p1@HOXD8!0.90!6.91!HOXD8;;chr3:25470156..25470227,+!p2@RARB!0.90!6.91!RARB;;chr14:24837368..24837401,+!p1@NFATC4!0.89!16.58!NFATC4;;chr19:13134772..13134822,+!p2@NFIX!0.87!9.67!NFIX;;chr1:170632959..170632987,+!p4@PRRX1!0.86!6.91!PRRX1;;chr11:65687158..65687216,+!p4@DRAP1!0.85!37.30!DRAP1;;chr12:53614155..53614187,-!p3@RARG!0.85!12.43!RARG;;chr17:46622114..46622138,-!p4@HOXB2!0.85!9.67!HOXB2;;chr17:46621101..46621143,-!p7@HOXB2!0.85!8.29!HOXB2;;chr1:149858461..149858479,+!p1@BOLA1!0.84!2498.86!BOLA1;;chr5:72743793..72743855,-!p4@FOXD1!0.83!6.91!FOXD1;;chr6:10412600..10412637,-!p1@TFAP2A!0.82!9.67!TFAP2A;;chr12:124873357..124873401,-!p1@NCOR2!0.81!69.07!NCOR2;;chr2:200322654..200322707,-!p2@SATB2!0.81!8.29!SATB2;;chr2:177001290..177001315,+!p1@HOXD3!0.81!5.53!HOXD3;;chr5:2751785..2751808,-!p2@IRX2!0.81!5.53!IRX2;;chr5:3595961..3595975,+!p3@IRX1!0.81!5.53!IRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.81!5.53!PRRX1;;chr1:25291475..25291511,-!p2@RUNX3!0.81!5.53!RUNX3;;chr20:55205825..55205847,+!p2@TFAP2C!0.81!5.53!TFAP2C;;chr11:65668011..65668020,-!p3@FOSL1!0.81!5.53!FOSL1;;chr12:2986275..2986363,-!p1@FOXM1!0.80!58.02!FOXM1;;chr20:42543441..42543497,+!p1@TOX2!0.79!24.86!TOX2;;chr7:19157043..19157088,-!p2@TWIST1!0.79!13.81!TWIST1;;chr17:38256799..38256815,-!p3@NR1D1!0.78!9.67!NR1D1;;chr17:59477275..59477286,+!p3@TBX2!0.78!6.91!TBX2;;chr12:66218598..66218645,+!p2@HMGA2!0.77!24.86!HMGA2;;chr17:41623009..41623053,-!p4@ETV4!0.77!8.29!ETV4;;chr17:3571863..3571881,-!p1@TAX1BP3!0.76!377.11!TAX1BP3;;chr17:41623692..41623715,-!p1@ETV4!0.76!22.10!ETV4;;chr7:150946015..150946070,-!p3@SMARCD3!0.76!11.05!SMARCD3;;chr7:44143925..44143970,+!p1@AEBP1!0.75!114.65!AEBP1;;chr17:46622070..46622109,-!p1@HOXB2!0.75!11.05!HOXB2;;chr15:57511609..57511651,+!p2@TCF12!0.75!8.29!TCF12;;chr19:17356436..17356481,-!p3@NR2F6!0.75!8.29!NR2F6;;chr3:25469724..25469773,+!p1@RARB!0.75!6.91!RARB;;chr4:81104985..81105005,+!p4@PRDM8!0.74!5.53!PRDM8;;chr3:141121847..141121868,+!p5@ZBTB38!0.73!6.91!ZBTB38;;chr17:41622765..41622821,-!p2@ETV4!0.73!6.91!ETV4;;chr6:10415276..10415341,-!p2@TFAP2A!0.73!5.53!TFAP2A;;chr8:49833978..49833996,-!p1@SNAI2!0.72!98.08!SNAI2;;chr2:172967621..172967637,-!p1@DLX2!0.72!12.43!DLX2;;chr20:39317868..39317884,-!p1@MAFB!0.71!55.25!MAFB;;chr6:31126291..31126399,+!p1@TCF19!0.71!44.20!TCF19;;chr8:72756667..72756736,-!p2@MSC!0.71!6.91!MSC;;chr5:134369879..134369898,-!p2@PITX1!0.71!4.14!PITX1;;chr6:134210243..134210257,+!p1@TCF21!0.71!4.14!TCF21;;chr8:93074803..93074845,-!p1@RUNX1T1!0.71!4.14!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.71!4.14!RUNX1T1;;chr19:50542543..50542548,+!p2@ZNF473!0.71!4.14!ZNF473;;chr1:170632439..170632465,+!p11@PRRX1!0.71!4.14!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.71!4.14!FOXS1;;chr15:80843472..80843480,+!p22@ARNT2!0.71!4.14!ARNT2;;chr15:80843484..80843499,+!p5@ARNT2!0.71!4.14!ARNT2;;chr16:54320322..54320343,-!p7@IRX3!0.71!4.14!IRX3;;chr16:86612320..86612394,+!p1@FOXL1!0.71!4.14!FOXL1;;chr19:31840278..31840300,-!p5@TSHZ3!0.71!4.14!TSHZ3;;chr2:119605253..119605264,-!p5@EN1!0.71!4.14!EN1;;chr2:176987463..176987479,+!p2@HOXD9!0.71!4.14!HOXD9;;chr2:66662510..66662521,+!p6@MEIS1!0.71!4.14!MEIS1;;chr3:157824001..157824078,-!p2@SHOX2!0.71!4.14!SHOX2;;chr4:299227..299272,-!p1@ZNF732!0.71!4.14!ZNF732;;chr11:46299443..46299459,+!p4@CREB3L1!0.71!4.14!CREB3L1;;chr12:115122318..115122331,-!p2@TBX3!0.71!4.14!TBX3;;chrX:136648643..136648711,+!p2@ZIC3!0.71!4.14!ZIC3;;chr20:30193083..30193098,+!p1@ID1!0.70!372.96!ID1;;chr9:35732592..35732640,+!p1@CREB3!0.69!59.40!CREB3;;chr5:174151553..174151610,+!p1@MSX2!0.69!6.91!MSX2;;chr19:50431999..50432026,+!p4@ATF5!0.69!5.53!ATF5;;chr11:65687243..65687276,+!p8@DRAP1!0.69!5.53!DRAP1;;chr10:77161650..77161661,-!p4@ZNF503!0.68!5.53!ZNF503;;chr1:8938709..8938720,-!p3@ENO1!0.66!200.30!ENO1;;chr5:176738887..176738934,-!p1@MXD3!0.66!27.63!MXD3;;chr12:2986206..2986258,-!p2@FOXM1!0.66!24.86!FOXM1;;chr21:47063625..47063658,+!p1@PCBP3!0.66!17.96!PCBP3;;chr2:101591314..101591333,+!p2@NPAS2!0.66!4.14!NPAS2;;chr6:45296048..45296082,+!p1@RUNX2!0.66!4.14!RUNX2;;chr20:42295713..42295738,+!p2@MYBL2!0.65!23.48!MYBL2;;chr12:53856284..53856299,+!p3@PCBP2!0.65!11.05!PCBP2;;chr20:39946400..39946423,-!p3@ZHX3!0.65!6.91!ZHX3;;chr9:3526360..3526421,-!p5@RFX3!0.64!6.91!RFX3;;chr20:39946361..39946379,-!p2@ZHX3!0.63!11.05!ZHX3;;chr12:66218003..66218018,+!p9@HMGA2!0.63!4.14!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.62!31.77!TBX3;;chr2:208031542..208031595,-!p2@KLF7!0.62!26.25!KLF7;;chr2:28616358..28616380,+!p3@FOSL2!0.62!19.34!FOSL2;;chr19:46272462..46272562,-!p1@SIX5!0.62!15.19!SIX5;;chr7:42276787..42276815,-!p1@GLI3!0.62!9.67!GLI3;;chr17:46621937..46621966,-!p2@HOXB2!0.62!9.67!HOXB2;;chr5:72744562..72744573,-!p3@FOXD1!0.62!4.14!FOXD1;;chr1:8938766..8938774,-!p2@ENO1!0.61!256.93!ENO1;;chr12:124873852..124873881,-!p3@NCOR2!0.61!22.10!NCOR2;;chr3:150126759..150126784,+!p2@TSC22D2!0.61!16.58!TSC22D2;;chr14:73360799..73360817,-!p1@DPF3!0.61!12.43!DPF3;;chr19:926001..926046,+!p1@ARID3A!0.61!12.43!ARID3A;;chr2:121493492..121493537,+!p2@GLI2!0.61!5.53!GLI2;;chr9:117150303..117150312,-!p3@AKNA!0.61!4.14!AKNA;;chr19:18392274..18392286,-!p3@JUND!0.60!23.48!JUND;;chr20:32274179..32274213,-!p1@E2F1!0.60!23.48!E2F1;;chr11:65686952..65686975,+!p5@DRAP1!0.60!19.34!DRAP1;;chr20:42295745..42295765,+!p1@MYBL2!0.59!58.02!MYBL2;;chr19:1592828..1592910,-!p2@MBD3!0.59!27.63!MBD3;;chr17:1958388..1958404,+!p1@HIC1!0.59!22.10!HIC1;;chr17:59477197..59477212,+!p2@TBX2!0.59!5.53!TBX2;;chr19:7584815..7584829,+!p2@ZNF358!0.59!4.14!ZNF358;;chr12:66218836..66218888,+!p1@HMGA2!0.58!31.77!HMGA2;;chr7:14029283..14029311,-!p1@ETV1!0.58!17.96!ETV1;;chr5:3595934..3595957,+!p2@IRX1!0.58!2.76!IRX1;;chr6:27356595..27356611,+!p6@ZNF391!0.58!2.76!ZNF391;;chr8:72756380..72756427,-!p8@MSC!0.58!2.76!MSC;;chr10:64134045..64134083,+!p3@ZNF365!0.58!2.76!ZNF365;;chr11:46333934..46333963,+!p5@CREB3L1!0.58!2.76!CREB3L1;;chr12:53613935..53613947,-!p8@RARG!0.58!2.76!RARG;;chr12:66218923..66218934,+!p14@HMGA2!0.58!2.76!HMGA2;;chrX:136648279..136648295,+!p1@ZIC3!0.58!2.76!ZIC3;;chr2:5832508..5832524,+!p1@SOX11!0.58!2.76!SOX11;;chr2:74730087..74730102,-!p4@LBX2!0.58!2.76!LBX2;;chr2:96012353..96012378,+!p4@KCNIP3!0.58!2.76!KCNIP3;;chr3:114343039..114343085,-!p8@ZBTB20!0.58!2.76!ZBTB20;;chr3:141121820..141121838,+!p9@ZBTB38!0.58!2.76!ZBTB38;;chr3:147111231..147111281,+!p3@ZIC1!0.58!2.76!ZIC1;;chr3:147114993..147115013,-!p5@ZIC4!0.58!2.76!ZIC4;;chr3:147139053..147139112,+!p5@ZIC1!0.58!2.76!ZIC1;;chr4:109089095..109089144,-!p6@LEF1!0.58!2.76!LEF1;;chr4:111558135..111558198,-!p2@PITX2!0.58!2.76!PITX2;;chr19:38183228..38183242,-!p4@ZNF781!0.58!2.76!ZNF781;;chr19:9420326..9420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| |expression_enrichment_score=chr20:55204351..55204377,+!p1@TFAP2C!2.11!161.62!TFAP2C;;chr7:19157248..19157268,-!p1@TWIST1!1.85!186.48!TWIST1;;chr9:132427883..132427951,+!p2@PRRX2!1.78!59.40!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.75!71.83!PRRX2;;chr6:34204921..34204939,+!p3@HMGA1!1.70!1403.45!HMGA1;;chr11:65686802..65686818,+!p6@DRAP1!1.54!58.02!DRAP1;;chr4:81118647..81118666,+!p1@PRDM8!1.53!42.82!PRDM8;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.53!33.15!ZBED1;;chr11:46299199..46299233,+!p1@CREB3L1!1.48!146.42!CREB3L1;;chr1:170632285..170632309,+!p1@PRRX1!1.48!33.15!PRRX1;;chr1:170633348..170633399,+!p2@PRRX1!1.35!29.01!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.33!55.25!OSR1;;chr2:119605214..119605230,-!p1@EN1!1.31!19.34!EN1;;chr3:147127142..147127168,+!p1@ZIC1!1.31!19.34!ZIC1;;chr5:72744594..72744609,-!p1@FOXD1!1.30!84.26!FOXD1;;chr5:321810..321877,+!p1@AHRR!1.27!55.25!AHRR;;chr11:65667846..65667868,-!p1@FOSL1!1.25!426.84!FOSL1;;chr12:53614115..53614154,-!p1@RARG!1.24!87.03!RARG;;chr1:25256756..25256774,-!p1@RUNX3!1.24!30.39!RUNX3;;chr3:147127177..147127194,+!p2@ZIC1!1.24!16.58!ZIC1;;chr11:65686732..65686756,+!p2@DRAP1!1.21!63.54!DRAP1;;chr1:170633262..170633285,+!p3@PRRX1!1.19!16.58!PRRX1;;chr11:65667884..65667895,-!p2@FOSL1!1.18!53.87!FOSL1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.18!15.19!GLIS1;;chr11:65687362..65687436,+!p3@DRAP1!1.16!60.78!DRAP1;;chr11:46299539..46299620,+!p2@CREB3L1!1.12!20.72!CREB3L1;;chr6:34204973..34204990,+!p4@HMGA1!1.10!154.71!HMGA1;;chr3:157823517..157823562,-!p1@SHOX2!1.10!12.43!SHOX2;;chr4:4861385..4861398,+!p1@MSX1!1.08!33.15!MSX1;;chr11:44331576..44331650,-!p1@ALX4!1.08!11.05!ALX4;;chr5:2751762..2751784,-!p1@IRX2!1.08!11.05!IRX2;;chr1:170632250..170632277,+!p7@PRRX1!1.08!11.05!PRRX1;;chr11:65687222..65687240,+!p7@DRAP1!1.07!13.81!DRAP1;;chr17:46622440..46622477,-!p5@HOXB2!1.04!11.05!HOXB2;;chr2:102091566..102091581,-!p1@RFX8!1.03!9.67!RFX8;;chr5:174151612..174151633,+!p2@MSX2!1.03!9.67!MSX2;;chr17:46622205..46622218,-!p3@HOXB2!1.02!11.05!HOXB2;;chr2:239756671..239756732,+!p1@TWIST2!1.01!30.39!TWIST2;;chr17:59477233..59477263,+!p1@TBX2!1.01!29.01!TBX2;;chr17:41622925..41622976,-!p3@ETV4!1.01!13.81!ETV4;;chr8:49833948..49833973,-!p2@SNAI2!1.00!58.02!SNAI2;;chr19:31840130..31840160,-!p2@TSHZ3!0.99!13.81!TSHZ3;;chr11:46299186..46299195,+!p3@CREB3L1!0.98!9.67!CREB3L1;;chr6:34204672..34204692,+!p1@HMGA1!0.97!958.66!HMGA1;;chr15:83953397..83953425,-!p1@BNC1!0.97!9.67!BNC1;;chr2:176994919..176994931,+!p2@HOXD8!0.97!8.29!HOXD8;;chr2:96012397..96012417,+!p3@KCNIP3!0.97!8.29!KCNIP3;;chr3:147111198..147111225,+!p4@ZIC1!0.97!8.29!ZIC1;;chr9:35732647..35732678,+!p2@CREB3!0.96!46.97!CREB3;;chr16:86544113..86544145,+!p1@FOXF1!0.94!9.67!FOXF1;;chr10:77161133..77161176,-!p3@ZNF503!0.93!16.58!ZNF503;;chr20:42543506..42543549,+!p2@TOX2!0.92!17.96!TOX2;;chr5:72744445..72744466,-!p2@FOXD1!0.92!12.43!FOXD1;;chr2:239756739..239756755,+!p2@TWIST2!0.91!12.43!TWIST2;;chr5:134369905..134369972,-!p1@PITX1!0.91!11.05!PITX1;;chr17:46675420..46675465,-!p3@HOXB6!0.91!8.29!HOXB6;;chr16:31076332..31076388,-!p3@ZNF668!0.90!6.91!ZNF668;;chr5:3595977..3595999,+!p1@IRX1!0.90!6.91!IRX1;;chr7:35293685..35293718,-!p1@TBX20!0.90!6.91!TBX20;;chr1:170633058..170633084,+!p5@PRRX1!0.90!6.91!PRRX1;;chr2:114036488..114036504,-!p1@PAX8!0.90!6.91!PAX8;;chr2:176994408..176994492,+!p1@HOXD8!0.90!6.91!HOXD8;;chr3:25470156..25470227,+!p2@RARB!0.90!6.91!RARB;;chr14:24837368..24837401,+!p1@NFATC4!0.89!16.58!NFATC4;;chr19:13134772..13134822,+!p2@NFIX!0.87!9.67!NFIX;;chr1:170632959..170632987,+!p4@PRRX1!0.86!6.91!PRRX1;;chr11:65687158..65687216,+!p4@DRAP1!0.85!37.30!DRAP1;;chr12:53614155..53614187,-!p3@RARG!0.85!12.43!RARG;;chr17:46622114..46622138,-!p4@HOXB2!0.85!9.67!HOXB2;;chr17:46621101..46621143,-!p7@HOXB2!0.85!8.29!HOXB2;;chr1:149858461..149858479,+!p1@BOLA1!0.84!2498.86!BOLA1;;chr5:72743793..72743855,-!p4@FOXD1!0.83!6.91!FOXD1;;chr6:10412600..10412637,-!p1@TFAP2A!0.82!9.67!TFAP2A;;chr12:124873357..124873401,-!p1@NCOR2!0.81!69.07!NCOR2;;chr2:200322654..200322707,-!p2@SATB2!0.81!8.29!SATB2;;chr2:177001290..177001315,+!p1@HOXD3!0.81!5.53!HOXD3;;chr5:2751785..2751808,-!p2@IRX2!0.81!5.53!IRX2;;chr5:3595961..3595975,+!p3@IRX1!0.81!5.53!IRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.81!5.53!PRRX1;;chr1:25291475..25291511,-!p2@RUNX3!0.81!5.53!RUNX3;;chr20:55205825..55205847,+!p2@TFAP2C!0.81!5.53!TFAP2C;;chr11:65668011..65668020,-!p3@FOSL1!0.81!5.53!FOSL1;;chr12:2986275..2986363,-!p1@FOXM1!0.80!58.02!FOXM1;;chr20:42543441..42543497,+!p1@TOX2!0.79!24.86!TOX2;;chr7:19157043..19157088,-!p2@TWIST1!0.79!13.81!TWIST1;;chr17:38256799..38256815,-!p3@NR1D1!0.78!9.67!NR1D1;;chr17:59477275..59477286,+!p3@TBX2!0.78!6.91!TBX2;;chr12:66218598..66218645,+!p2@HMGA2!0.77!24.86!HMGA2;;chr17:41623009..41623053,-!p4@ETV4!0.77!8.29!ETV4;;chr17:3571863..3571881,-!p1@TAX1BP3!0.76!377.11!TAX1BP3;;chr17:41623692..41623715,-!p1@ETV4!0.76!22.10!ETV4;;chr7:150946015..150946070,-!p3@SMARCD3!0.76!11.05!SMARCD3;;chr7:44143925..44143970,+!p1@AEBP1!0.75!114.65!AEBP1;;chr17:46622070..46622109,-!p1@HOXB2!0.75!11.05!HOXB2;;chr15:57511609..57511651,+!p2@TCF12!0.75!8.29!TCF12;;chr19:17356436..17356481,-!p3@NR2F6!0.75!8.29!NR2F6;;chr3:25469724..25469773,+!p1@RARB!0.75!6.91!RARB;;chr4:81104985..81105005,+!p4@PRDM8!0.74!5.53!PRDM8;;chr3:141121847..141121868,+!p5@ZBTB38!0.73!6.91!ZBTB38;;chr17:41622765..41622821,-!p2@ETV4!0.73!6.91!ETV4;;chr6:10415276..10415341,-!p2@TFAP2A!0.73!5.53!TFAP2A;;chr8:49833978..49833996,-!p1@SNAI2!0.72!98.08!SNAI2;;chr2:172967621..172967637,-!p1@DLX2!0.72!12.43!DLX2;;chr20:39317868..39317884,-!p1@MAFB!0.71!55.25!MAFB;;chr6:31126291..31126399,+!p1@TCF19!0.71!44.20!TCF19;;chr8:72756667..72756736,-!p2@MSC!0.71!6.91!MSC;;chr5:134369879..134369898,-!p2@PITX1!0.71!4.14!PITX1;;chr6:134210243..134210257,+!p1@TCF21!0.71!4.14!TCF21;;chr8:93074803..93074845,-!p1@RUNX1T1!0.71!4.14!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.71!4.14!RUNX1T1;;chr19:50542543..50542548,+!p2@ZNF473!0.71!4.14!ZNF473;;chr1:170632439..170632465,+!p11@PRRX1!0.71!4.14!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.71!4.14!FOXS1;;chr15:80843472..80843480,+!p22@ARNT2!0.71!4.14!ARNT2;;chr15:80843484..80843499,+!p5@ARNT2!0.71!4.14!ARNT2;;chr16:54320322..54320343,-!p7@IRX3!0.71!4.14!IRX3;;chr16:86612320..86612394,+!p1@FOXL1!0.71!4.14!FOXL1;;chr19:31840278..31840300,-!p5@TSHZ3!0.71!4.14!TSHZ3;;chr2:119605253..119605264,-!p5@EN1!0.71!4.14!EN1;;chr2:176987463..176987479,+!p2@HOXD9!0.71!4.14!HOXD9;;chr2:66662510..66662521,+!p6@MEIS1!0.71!4.14!MEIS1;;chr3:157824001..157824078,-!p2@SHOX2!0.71!4.14!SHOX2;;chr4:299227..299272,-!p1@ZNF732!0.71!4.14!ZNF732;;chr11:46299443..46299459,+!p4@CREB3L1!0.71!4.14!CREB3L1;;chr12:115122318..115122331,-!p2@TBX3!0.71!4.14!TBX3;;chrX:136648643..136648711,+!p2@ZIC3!0.71!4.14!ZIC3;;chr20:30193083..30193098,+!p1@ID1!0.70!372.96!ID1;;chr9:35732592..35732640,+!p1@CREB3!0.69!59.40!CREB3;;chr5:174151553..174151610,+!p1@MSX2!0.69!6.91!MSX2;;chr19:50431999..50432026,+!p4@ATF5!0.69!5.53!ATF5;;chr11:65687243..65687276,+!p8@DRAP1!0.69!5.53!DRAP1;;chr10:77161650..77161661,-!p4@ZNF503!0.68!5.53!ZNF503;;chr1:8938709..8938720,-!p3@ENO1!0.66!200.30!ENO1;;chr5:176738887..176738934,-!p1@MXD3!0.66!27.63!MXD3;;chr12:2986206..2986258,-!p2@FOXM1!0.66!24.86!FOXM1;;chr21:47063625..47063658,+!p1@PCBP3!0.66!17.96!PCBP3;;chr2:101591314..101591333,+!p2@NPAS2!0.66!4.14!NPAS2;;chr6:45296048..45296082,+!p1@RUNX2!0.66!4.14!RUNX2;;chr20:42295713..42295738,+!p2@MYBL2!0.65!23.48!MYBL2;;chr12:53856284..53856299,+!p3@PCBP2!0.65!11.05!PCBP2;;chr20:39946400..39946423,-!p3@ZHX3!0.65!6.91!ZHX3;;chr9:3526360..3526421,-!p5@RFX3!0.64!6.91!RFX3;;chr20:39946361..39946379,-!p2@ZHX3!0.63!11.05!ZHX3;;chr12:66218003..66218018,+!p9@HMGA2!0.63!4.14!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.62!31.77!TBX3;;chr2:208031542..208031595,-!p2@KLF7!0.62!26.25!KLF7;;chr2:28616358..28616380,+!p3@FOSL2!0.62!19.34!FOSL2;;chr19:46272462..46272562,-!p1@SIX5!0.62!15.19!SIX5;;chr7:42276787..42276815,-!p1@GLI3!0.62!9.67!GLI3;;chr17:46621937..46621966,-!p2@HOXB2!0.62!9.67!HOXB2;;chr5:72744562..72744573,-!p3@FOXD1!0.62!4.14!FOXD1;;chr1:8938766..8938774,-!p2@ENO1!0.61!256.93!ENO1;;chr12:124873852..124873881,-!p3@NCOR2!0.61!22.10!NCOR2;;chr3:150126759..150126784,+!p2@TSC22D2!0.61!16.58!TSC22D2;;chr14:73360799..73360817,-!p1@DPF3!0.61!12.43!DPF3;;chr19:926001..926046,+!p1@ARID3A!0.61!12.43!ARID3A;;chr2:121493492..121493537,+!p2@GLI2!0.61!5.53!GLI2;;chr9:117150303..117150312,-!p3@AKNA!0.61!4.14!AKNA;;chr19:18392274..18392286,-!p3@JUND!0.60!23.48!JUND;;chr20:32274179..32274213,-!p1@E2F1!0.60!23.48!E2F1;;chr11:65686952..65686975,+!p5@DRAP1!0.60!19.34!DRAP1;;chr20:42295745..42295765,+!p1@MYBL2!0.59!58.02!MYBL2;;chr19:1592828..1592910,-!p2@MBD3!0.59!27.63!MBD3;;chr17:1958388..1958404,+!p1@HIC1!0.59!22.10!HIC1;;chr17:59477197..59477212,+!p2@TBX2!0.59!5.53!TBX2;;chr19:7584815..7584829,+!p2@ZNF358!0.59!4.14!ZNF358;;chr12:66218836..66218888,+!p1@HMGA2!0.58!31.77!HMGA2;;chr7:14029283..14029311,-!p1@ETV1!0.58!17.96!ETV1;;chr5:3595934..3595957,+!p2@IRX1!0.58!2.76!IRX1;;chr6:27356595..27356611,+!p6@ZNF391!0.58!2.76!ZNF391;;chr8:72756380..72756427,-!p8@MSC!0.58!2.76!MSC;;chr10:64134045..64134083,+!p3@ZNF365!0.58!2.76!ZNF365;;chr11:46333934..46333963,+!p5@CREB3L1!0.58!2.76!CREB3L1;;chr12:53613935..53613947,-!p8@RARG!0.58!2.76!RARG;;chr12:66218923..66218934,+!p14@HMGA2!0.58!2.76!HMGA2;;chrX:136648279..136648295,+!p1@ZIC3!0.58!2.76!ZIC3;;chr2:5832508..5832524,+!p1@SOX11!0.58!2.76!SOX11;;chr2:74730087..74730102,-!p4@LBX2!0.58!2.76!LBX2;;chr2:96012353..96012378,+!p4@KCNIP3!0.58!2.76!KCNIP3;;chr3:114343039..114343085,-!p8@ZBTB20!0.58!2.76!ZBTB20;;chr3:141121820..141121838,+!p9@ZBTB38!0.58!2.76!ZBTB38;;chr3:147111231..147111281,+!p3@ZIC1!0.58!2.76!ZIC1;;chr3:147114993..147115013,-!p5@ZIC4!0.58!2.76!ZIC4;;chr3:147139053..147139112,+!p5@ZIC1!0.58!2.76!ZIC1;;chr4:109089095..109089144,-!p6@LEF1!0.58!2.76!LEF1;;chr4:111558135..111558198,-!p2@PITX2!0.58!2.76!PITX2;;chr19:38183228..38183242,-!p4@ZNF781!0.58!2.76!ZNF781;;chr19:9420326..9420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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000346;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002559;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001003;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002067;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002416 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000134,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor3.CNhs12030.11420-118F7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor3.CNhs12030.11420-118F7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor3.CNhs12030.11420-118F7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor3.CNhs12030.11420-118F7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Dermal%2520Papilla%2520Cells%252c%2520donor3.CNhs12030.11420-118F7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11420-118F7 | |id=FF:11420-118F7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000071 | ||
|is_obsolete= | |||
|library_id=CNhs12030 | |||
|library_id_phase_based=2:CNhs12030 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11420 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10004.GTTTCG.11420 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11420 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10004.GTTTCG.11420 | |||
|name=Hair Follicle Dermal Papilla Cells, donor3 | |name=Hair Follicle Dermal Papilla Cells, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12030,LSID837,release011,COMPLETED | |profile_hcage=CNhs12030,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10004,,, | |profile_srnaseq=SRhi10004,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=CA602-R10a | |rna_catalog_number=CA602-R10a | ||
| Line 56: | Line 82: | ||
|rna_tube_id=118F7 | |rna_tube_id=118F7 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10004.GTTTCG | |||
|sample_age=36 | |sample_age=36 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.61339525912934e-211!GO:0005737;cytoplasm;8.22192340915296e-187!GO:0043226;organelle;4.66661548971295e-150!GO:0043229;intracellular organelle;1.15022391678037e-149!GO:0043231;intracellular membrane-bound organelle;5.67798234482553e-149!GO:0043227;membrane-bound organelle;8.34697745236353e-149!GO:0044422;organelle part;7.532063979667e-133!GO:0044444;cytoplasmic part;2.0841082660208e-131!GO:0044446;intracellular organelle part;2.0841082660208e-131!GO:0032991;macromolecular complex;6.10137863424425e-91!GO:0030529;ribonucleoprotein complex;4.05612752608782e-76!GO:0005515;protein binding;1.53231722928683e-75!GO:0005739;mitochondrion;5.64040294168296e-72!GO:0044237;cellular metabolic process;2.74844657524075e-68!GO:0044238;primary metabolic process;2.24765412387264e-67!GO:0043233;organelle lumen;7.51864716126517e-60!GO:0031974;membrane-enclosed lumen;7.51864716126517e-60!GO:0043170;macromolecule metabolic process;5.53515416600975e-58!GO:0031090;organelle membrane;2.45559471177279e-53!GO:0044428;nuclear part;1.15018169863446e-52!GO:0005840;ribosome;4.10112003748766e-52!GO:0003723;RNA binding;6.22986282811868e-50!GO:0044429;mitochondrial part;2.56392001702144e-48!GO:0043234;protein complex;7.32478649070333e-47!GO:0003735;structural constituent of ribosome;1.40343107534763e-46!GO:0006412;translation;2.15390884583491e-46!GO:0019538;protein metabolic process;3.51442810593248e-46!GO:0005634;nucleus;1.1751968381475e-45!GO:0009058;biosynthetic process;1.10168384869243e-44!GO:0016043;cellular component organization and biogenesis;7.44429185819806e-44!GO:0044249;cellular biosynthetic process;2.456640061605e-42!GO:0044260;cellular macromolecule metabolic process;1.46860396544877e-40!GO:0044267;cellular protein metabolic process;6.43707391824561e-40!GO:0031967;organelle envelope;1.84539892788627e-39!GO:0031975;envelope;4.11675541792919e-39!GO:0009059;macromolecule biosynthetic process;1.40805836723869e-38!GO:0033279;ribosomal subunit;2.1618918350217e-38!GO:0005829;cytosol;4.04222251796854e-38!GO:0006396;RNA processing;1.69915632401902e-35!GO:0015031;protein transport;7.26413412301013e-35!GO:0033036;macromolecule localization;4.08224905240631e-33!GO:0005740;mitochondrial envelope;1.9426921641342e-32!GO:0031981;nuclear lumen;3.05116765435169e-32!GO:0008104;protein localization;7.46571829133944e-32!GO:0045184;establishment of protein localization;9.47654566223987e-32!GO:0006996;organelle organization and biogenesis;6.04890822487276e-31!GO:0031966;mitochondrial membrane;6.48742611620558e-31!GO:0043228;non-membrane-bound organelle;1.39543491841272e-30!GO:0043232;intracellular non-membrane-bound organelle;1.39543491841272e-30!GO:0046907;intracellular transport;1.40462346826849e-30!GO:0019866;organelle inner membrane;1.28075071360948e-29!GO:0065003;macromolecular complex assembly;3.14966904236467e-29!GO:0005743;mitochondrial inner membrane;3.05079765995876e-28!GO:0043283;biopolymer metabolic process;1.13166806003584e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.34788506259411e-27!GO:0016071;mRNA metabolic process;7.34793613618212e-27!GO:0022607;cellular component assembly;6.80099690998991e-26!GO:0006886;intracellular protein transport;3.07338681330422e-25!GO:0008380;RNA splicing;8.45200297701476e-24!GO:0006397;mRNA processing;1.30946978900193e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.82385835906948e-22!GO:0006119;oxidative phosphorylation;3.11634862162051e-22!GO:0010467;gene expression;4.57011145926175e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.3695987800808e-22!GO:0044455;mitochondrial membrane part;1.70643638498377e-21!GO:0006259;DNA metabolic process;2.6832181988979e-21!GO:0044445;cytosolic part;5.74018603041055e-21!GO:0015934;large ribosomal subunit;3.06959326789102e-20!GO:0007049;cell cycle;3.70548590470954e-20!GO:0031980;mitochondrial lumen;3.94270855676355e-20!GO:0005759;mitochondrial matrix;3.94270855676355e-20!GO:0012505;endomembrane system;4.05136151914563e-20!GO:0051649;establishment of cellular localization;1.52196366780144e-19!GO:0051641;cellular localization;2.07588402891922e-19!GO:0015935;small ribosomal subunit;3.30079233940584e-19!GO:0051186;cofactor metabolic process;1.5685357042716e-18!GO:0005654;nucleoplasm;1.61176624753285e-18!GO:0000166;nucleotide binding;2.16861638017188e-18!GO:0048770;pigment granule;3.06642427106376e-18!GO:0042470;melanosome;3.06642427106376e-18!GO:0016462;pyrophosphatase activity;3.31262616168716e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.60704603560057e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;5.33063000583711e-18!GO:0005783;endoplasmic reticulum;7.49604863233e-18!GO:0005681;spliceosome;7.5273084412695e-18!GO:0017111;nucleoside-triphosphatase activity;1.27305033678008e-17!GO:0005746;mitochondrial respiratory chain;1.29849297881349e-17!GO:0044432;endoplasmic reticulum part;5.47294755792707e-17!GO:0022402;cell cycle process;9.16749360905753e-17!GO:0000278;mitotic cell cycle;1.84458918842706e-16!GO:0000502;proteasome complex (sensu Eukaryota);2.65677077268013e-16!GO:0008134;transcription factor binding;1.00112847153946e-15!GO:0044451;nucleoplasm part;2.49062395020769e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.77960607208343e-15!GO:0016874;ligase activity;5.5552994461075e-15!GO:0050136;NADH dehydrogenase (quinone) activity;9.1717358173811e-15!GO:0003954;NADH dehydrogenase activity;9.1717358173811e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.1717358173811e-15!GO:0006457;protein folding;9.32682746024526e-15!GO:0006732;coenzyme metabolic process;1.95205903318082e-14!GO:0005761;mitochondrial ribosome;2.66670152777507e-14!GO:0000313;organellar ribosome;2.66670152777507e-14!GO:0005794;Golgi apparatus;2.66670152777507e-14!GO:0017076;purine nucleotide binding;3.35731556165052e-14!GO:0005730;nucleolus;4.87615878277796e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.58125157219124e-14!GO:0032553;ribonucleotide binding;6.63027607858848e-14!GO:0032555;purine ribonucleotide binding;6.63027607858848e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.18445361288749e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.03166257810078e-13!GO:0044248;cellular catabolic process;3.82807875761249e-13!GO:0006605;protein targeting;4.16630643808973e-13!GO:0043285;biopolymer catabolic process;4.2379903826973e-13!GO:0030964;NADH dehydrogenase complex (quinone);6.4846506681023e-13!GO:0045271;respiratory chain complex I;6.4846506681023e-13!GO:0005747;mitochondrial respiratory chain complex I;6.4846506681023e-13!GO:0006512;ubiquitin cycle;6.91825490172212e-13!GO:0009055;electron carrier activity;8.72585368533405e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.00547112651216e-12!GO:0042773;ATP synthesis coupled electron transport;1.00547112651216e-12!GO:0005524;ATP binding;1.20353184457067e-12!GO:0009057;macromolecule catabolic process;1.48227215630593e-12!GO:0044265;cellular macromolecule catabolic process;1.66304241933044e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.70420397937539e-12!GO:0022618;protein-RNA complex assembly;1.79983897902286e-12!GO:0030554;adenyl nucleotide binding;1.90365850163703e-12!GO:0051082;unfolded protein binding;2.03753607334022e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.19482931839183e-12!GO:0032559;adenyl ribonucleotide binding;2.56173792442206e-12!GO:0005789;endoplasmic reticulum membrane;3.66504978847659e-12!GO:0022403;cell cycle phase;3.66504978847659e-12!GO:0007067;mitosis;6.60351173210478e-12!GO:0000087;M phase of mitotic cell cycle;7.5718696621809e-12!GO:0043412;biopolymer modification;1.19380456971427e-11!GO:0030163;protein catabolic process;1.41568027999997e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;1.81567409637378e-11!GO:0048193;Golgi vesicle transport;1.83753470996263e-11!GO:0016491;oxidoreductase activity;1.85286497588154e-11!GO:0044257;cellular protein catabolic process;2.55379990794893e-11!GO:0019941;modification-dependent protein catabolic process;2.71793232413449e-11!GO:0043632;modification-dependent macromolecule catabolic process;2.71793232413449e-11!GO:0009259;ribonucleotide metabolic process;3.68363899944208e-11!GO:0012501;programmed cell death;4.24396360888776e-11!GO:0003712;transcription cofactor activity;4.34110155850057e-11!GO:0006511;ubiquitin-dependent protein catabolic process;5.11367601719876e-11!GO:0008135;translation factor activity, nucleic acid binding;5.41543866700296e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;8.93855553243484e-11!GO:0000375;RNA splicing, via transesterification reactions;8.93855553243484e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.93855553243484e-11!GO:0006915;apoptosis;9.36774553514508e-11!GO:0006464;protein modification process;1.03121126816063e-10!GO:0005793;ER-Golgi intermediate compartment;1.14607814160783e-10!GO:0016192;vesicle-mediated transport;1.60308969932705e-10!GO:0006163;purine nucleotide metabolic process;1.73566769407489e-10!GO:0051276;chromosome organization and biogenesis;2.51386898651738e-10!GO:0009150;purine ribonucleotide metabolic process;2.64165513494135e-10!GO:0008219;cell death;2.87538508903301e-10!GO:0016265;death;2.87538508903301e-10!GO:0042254;ribosome biogenesis and assembly;3.04658583199664e-10!GO:0051726;regulation of cell cycle;3.12983965448966e-10!GO:0009260;ribonucleotide biosynthetic process;3.28906799356066e-10!GO:0065004;protein-DNA complex assembly;3.69673197295812e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;4.70819812191473e-10!GO:0000074;regulation of progression through cell cycle;4.92104570882866e-10!GO:0006164;purine nucleotide biosynthetic process;5.02925528559893e-10!GO:0005694;chromosome;5.20039848144005e-10!GO:0042623;ATPase activity, coupled;5.70398376146537e-10!GO:0044427;chromosomal part;5.88326324083739e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.78066332764433e-10!GO:0009152;purine ribonucleotide biosynthetic process;7.1268353540202e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.520934753508e-10!GO:0006913;nucleocytoplasmic transport;1.03539991586589e-09!GO:0051188;cofactor biosynthetic process;1.25382767497339e-09!GO:0051169;nuclear transport;1.29931282943077e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.33194996565287e-09!GO:0016887;ATPase activity;1.4848764771281e-09!GO:0006334;nucleosome assembly;1.5062535907245e-09!GO:0006323;DNA packaging;1.68326195780718e-09!GO:0015078;hydrogen ion transmembrane transporter activity;2.40878582614867e-09!GO:0051301;cell division;2.75799817374858e-09!GO:0006974;response to DNA damage stimulus;2.80406439771879e-09!GO:0000279;M phase;3.60730273924069e-09!GO:0006399;tRNA metabolic process;3.80837365628263e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.02937160565872e-09!GO:0044453;nuclear membrane part;5.03698518683826e-09!GO:0009141;nucleoside triphosphate metabolic process;5.15850082289822e-09!GO:0031497;chromatin assembly;7.20572278526137e-09!GO:0003743;translation initiation factor activity;7.56911018167614e-09!GO:0006091;generation of precursor metabolites and energy;8.20699777182559e-09!GO:0015986;ATP synthesis coupled proton transport;8.65310006592249e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.65310006592249e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.65310006592249e-09!GO:0009144;purine nucleoside triphosphate metabolic process;8.65310006592249e-09!GO:0043687;post-translational protein modification;9.88646553968448e-09!GO:0003676;nucleic acid binding;1.03048082790359e-08!GO:0006333;chromatin assembly or disassembly;1.13656966746865e-08!GO:0006461;protein complex assembly;1.17998458117252e-08!GO:0009117;nucleotide metabolic process;1.47096231274141e-08!GO:0005635;nuclear envelope;1.959154354916e-08!GO:0017038;protein import;2.09476463840734e-08!GO:0009056;catabolic process;2.26250608068297e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.40746147187861e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.40746147187861e-08!GO:0000785;chromatin;2.79231217788485e-08!GO:0046034;ATP metabolic process;2.79231217788485e-08!GO:0019829;cation-transporting ATPase activity;2.79231217788485e-08!GO:0031965;nuclear membrane;3.00918475969357e-08!GO:0009060;aerobic respiration;3.18529437558681e-08!GO:0008639;small protein conjugating enzyme activity;3.2976539290118e-08!GO:0006260;DNA replication;3.51949010830633e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.03348209316288e-08!GO:0004812;aminoacyl-tRNA ligase activity;4.03348209316288e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.03348209316288e-08!GO:0045333;cellular respiration;4.60473163058327e-08!GO:0004842;ubiquitin-protein ligase activity;4.66332084512207e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.21551128599861e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.21551128599861e-08!GO:0008565;protein transporter activity;5.5434944504545e-08!GO:0005839;proteasome core complex (sensu Eukaryota);5.544015382701e-08!GO:0006413;translational initiation;5.89253895684295e-08!GO:0048523;negative regulation of cellular process;8.94086266899715e-08!GO:0065002;intracellular protein transport across a membrane;9.78837400839686e-08!GO:0009108;coenzyme biosynthetic process;1.06031245128294e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.06031245128294e-07!GO:0006446;regulation of translational initiation;1.07638588646591e-07!GO:0043038;amino acid activation;1.1927235469618e-07!GO:0006418;tRNA aminoacylation for protein translation;1.1927235469618e-07!GO:0043039;tRNA aminoacylation;1.1927235469618e-07!GO:0006754;ATP biosynthetic process;1.35294642590336e-07!GO:0006753;nucleoside phosphate metabolic process;1.35294642590336e-07!GO:0030120;vesicle coat;1.35524810388116e-07!GO:0030662;coated vesicle membrane;1.35524810388116e-07!GO:0019787;small conjugating protein ligase activity;1.4893036389126e-07!GO:0007005;mitochondrion organization and biogenesis;1.56700163850239e-07!GO:0009719;response to endogenous stimulus;1.79498945107436e-07!GO:0005643;nuclear pore;2.00862470766598e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.19870134414336e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.38369908249855e-07!GO:0006281;DNA repair;2.76441585993558e-07!GO:0030532;small nuclear ribonucleoprotein complex;2.77155454119476e-07!GO:0016740;transferase activity;2.9856608165583e-07!GO:0048475;coated membrane;2.99764195194575e-07!GO:0030117;membrane coat;2.99764195194575e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.15976579529609e-07!GO:0006364;rRNA processing;3.8995141381092e-07!GO:0043067;regulation of programmed cell death;4.90822785954632e-07!GO:0004298;threonine endopeptidase activity;5.14166365247188e-07!GO:0042981;regulation of apoptosis;5.16390591967755e-07!GO:0016787;hydrolase activity;5.20846562711107e-07!GO:0005788;endoplasmic reticulum lumen;5.92559018174833e-07!GO:0003924;GTPase activity;5.92559018174833e-07!GO:0006752;group transfer coenzyme metabolic process;6.0323015417721e-07!GO:0046930;pore complex;6.89807508659838e-07!GO:0006888;ER to Golgi vesicle-mediated transport;6.96104657682263e-07!GO:0005768;endosome;7.06795521046244e-07!GO:0016604;nuclear body;7.37743872150691e-07!GO:0006366;transcription from RNA polymerase II promoter;8.34415105813196e-07!GO:0044431;Golgi apparatus part;9.4235794594361e-07!GO:0016881;acid-amino acid ligase activity;1.07681320367721e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.1500249236016e-06!GO:0016072;rRNA metabolic process;1.1758270192467e-06!GO:0048519;negative regulation of biological process;1.1758270192467e-06!GO:0006793;phosphorus metabolic process;1.1758270192467e-06!GO:0006796;phosphate metabolic process;1.1758270192467e-06!GO:0016779;nucleotidyltransferase activity;1.17629518689483e-06!GO:0006099;tricarboxylic acid cycle;1.22655496391657e-06!GO:0046356;acetyl-CoA catabolic process;1.22655496391657e-06!GO:0045259;proton-transporting ATP synthase complex;1.45528375137918e-06!GO:0051187;cofactor catabolic process;1.60424516183076e-06!GO:0006084;acetyl-CoA metabolic process;2.19810230098715e-06!GO:0000786;nucleosome;2.79849141699038e-06!GO:0015630;microtubule cytoskeleton;3.0773010273357e-06!GO:0051246;regulation of protein metabolic process;3.36221737528632e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.56974689113024e-06!GO:0016070;RNA metabolic process;3.78679105430251e-06!GO:0005762;mitochondrial large ribosomal subunit;4.04279347386023e-06!GO:0000315;organellar large ribosomal subunit;4.04279347386023e-06!GO:0016023;cytoplasmic membrane-bound vesicle;5.48366489472092e-06!GO:0009109;coenzyme catabolic process;5.56655885810918e-06!GO:0031252;leading edge;5.70365983780734e-06!GO:0031988;membrane-bound vesicle;6.06602326956098e-06!GO:0003714;transcription corepressor activity;7.21215387631415e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.4501666439564e-06!GO:0043069;negative regulation of programmed cell death;8.60680442288481e-06!GO:0005667;transcription factor complex;9.74094184118581e-06!GO:0051329;interphase of mitotic cell cycle;9.99923173138896e-06!GO:0008361;regulation of cell size;1.05885519084922e-05!GO:0032446;protein modification by small protein conjugation;1.15589339919091e-05!GO:0016567;protein ubiquitination;1.31619572409056e-05!GO:0003697;single-stranded DNA binding;1.31619572409056e-05!GO:0000139;Golgi membrane;1.41239054151528e-05!GO:0043066;negative regulation of apoptosis;1.47178594261462e-05!GO:0009165;nucleotide biosynthetic process;1.51254350799516e-05!GO:0016310;phosphorylation;1.55802695664056e-05!GO:0016049;cell growth;1.57110933875041e-05!GO:0003713;transcription coactivator activity;1.69808964466714e-05!GO:0051325;interphase;1.74627897960412e-05!GO:0004386;helicase activity;1.77324529910605e-05!GO:0051170;nuclear import;1.82864409925217e-05!GO:0006916;anti-apoptosis;2.1233236138637e-05!GO:0044440;endosomal part;2.36272586269795e-05!GO:0010008;endosome membrane;2.36272586269795e-05!GO:0005798;Golgi-associated vesicle;2.36272586269795e-05!GO:0016563;transcription activator activity;2.45900594046493e-05!GO:0045786;negative regulation of progression through cell cycle;2.69211376238746e-05!GO:0006606;protein import into nucleus;3.06760150141949e-05!GO:0000245;spliceosome assembly;3.4506979574266e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.6242218959928e-05!GO:0008026;ATP-dependent helicase activity;3.68169529261297e-05!GO:0048522;positive regulation of cellular process;3.69735990574632e-05!GO:0001558;regulation of cell growth;3.86284581278426e-05!GO:0051789;response to protein stimulus;4.50507080419954e-05!GO:0006986;response to unfolded protein;4.50507080419954e-05!GO:0005773;vacuole;5.17661574943015e-05!GO:0000151;ubiquitin ligase complex;5.29307741990562e-05!GO:0030867;rough endoplasmic reticulum membrane;5.59946183393349e-05!GO:0005819;spindle;5.78916343755265e-05!GO:0016607;nuclear speck;5.98488834436044e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.20067627801368e-05!GO:0015399;primary active transmembrane transporter activity;6.20067627801368e-05!GO:0005770;late endosome;6.4524218706501e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.63995532030149e-05!GO:0003899;DNA-directed RNA polymerase activity;6.65992277577743e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.93927507282036e-05!GO:0033116;ER-Golgi intermediate compartment membrane;7.64100671255884e-05!GO:0005048;signal sequence binding;7.87218188732663e-05!GO:0031982;vesicle;8.51611868666857e-05!GO:0007010;cytoskeleton organization and biogenesis;9.2461528273932e-05!GO:0016853;isomerase activity;9.25431914080603e-05!GO:0031410;cytoplasmic vesicle;9.92463869729208e-05!GO:0019867;outer membrane;0.000109453467421493!GO:0030036;actin cytoskeleton organization and biogenesis;0.000113985611843214!GO:0005905;coated pit;0.000125548415757375!GO:0005813;centrosome;0.000144674781907221!GO:0006082;organic acid metabolic process;0.000147305300253191!GO:0043566;structure-specific DNA binding;0.000147305300253191!GO:0019752;carboxylic acid metabolic process;0.000168228247554196!GO:0031968;organelle outer membrane;0.000175476809091736!GO:0030133;transport vesicle;0.000177780767310518!GO:0016564;transcription repressor activity;0.00018091638650542!GO:0019899;enzyme binding;0.000199235109671213!GO:0006613;cotranslational protein targeting to membrane;0.000207988668696503!GO:0005815;microtubule organizing center;0.000217015425233903!GO:0016568;chromatin modification;0.000240546374270256!GO:0000314;organellar small ribosomal subunit;0.00025939467620602!GO:0005763;mitochondrial small ribosomal subunit;0.00025939467620602!GO:0008654;phospholipid biosynthetic process;0.000265105828587669!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000267529210063286!GO:0051427;hormone receptor binding;0.000296446872039315!GO:0044262;cellular carbohydrate metabolic process;0.000296446872039315!GO:0050794;regulation of cellular process;0.000296446872039315!GO:0045454;cell redox homeostasis;0.000300335165709774!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00034427826568342!GO:0000323;lytic vacuole;0.000348128844916907!GO:0005764;lysosome;0.000348128844916907!GO:0065009;regulation of a molecular function;0.000373259159843942!GO:0005741;mitochondrial outer membrane;0.000417419619023839!GO:0003724;RNA helicase activity;0.000474028075171431!GO:0007243;protein kinase cascade;0.000475215897390476!GO:0005769;early endosome;0.000485122349526899!GO:0050657;nucleic acid transport;0.000485658772744071!GO:0051236;establishment of RNA localization;0.000485658772744071!GO:0050658;RNA transport;0.000485658772744071!GO:0043623;cellular protein complex assembly;0.000510154402612616!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000510782920167715!GO:0043492;ATPase activity, coupled to movement of substances;0.000520054598432653!GO:0006403;RNA localization;0.000544608837671075!GO:0006839;mitochondrial transport;0.000580608876316818!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00059945824423716!GO:0035257;nuclear hormone receptor binding;0.000605822417912595!GO:0031324;negative regulation of cellular metabolic process;0.000619087815236499!GO:0006118;electron transport;0.000619087815236499!GO:0030029;actin filament-based process;0.000662162878109528!GO:0005885;Arp2/3 protein complex;0.000666518098287263!GO:0015992;proton transport;0.000718220285720285!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000735026201866303!GO:0009967;positive regulation of signal transduction;0.000773488752904944!GO:0019843;rRNA binding;0.000804359105861904!GO:0008047;enzyme activator activity;0.000811923195998933!GO:0005525;GTP binding;0.000812801273034826!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000820145621133273!GO:0022890;inorganic cation transmembrane transporter activity;0.000919288410608146!GO:0043681;protein import into mitochondrion;0.000929275581258685!GO:0006818;hydrogen transport;0.000948288218204028!GO:0008610;lipid biosynthetic process;0.00115391936138925!GO:0051920;peroxiredoxin activity;0.00118894531256204!GO:0007050;cell cycle arrest;0.00128503852705211!GO:0048518;positive regulation of biological process;0.00136596506252853!GO:0043284;biopolymer biosynthetic process;0.00137993714578381!GO:0008250;oligosaccharyl transferase complex;0.00138746559915916!GO:0016126;sterol biosynthetic process;0.00139131636566363!GO:0043021;ribonucleoprotein binding;0.00153883099227343!GO:0030663;COPI coated vesicle membrane;0.00156087528516725!GO:0030126;COPI vesicle coat;0.00156087528516725!GO:0004576;oligosaccharyl transferase activity;0.00157272668090084!GO:0008092;cytoskeletal protein binding;0.00158375925453077!GO:0051168;nuclear export;0.00159531006379826!GO:0006612;protein targeting to membrane;0.00160308308060918!GO:0030132;clathrin coat of coated pit;0.00160829270575999!GO:0051252;regulation of RNA metabolic process;0.001718754466202!GO:0040008;regulation of growth;0.00173114720204056!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00179381040285696!GO:0030137;COPI-coated vesicle;0.0018146073867366!GO:0006261;DNA-dependent DNA replication;0.00183202085849362!GO:0007006;mitochondrial membrane organization and biogenesis;0.00195004568520778!GO:0046474;glycerophospholipid biosynthetic process;0.00206916899633737!GO:0030176;integral to endoplasmic reticulum membrane;0.00209232523858266!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00221040295339453!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00221040295339453!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00221040295339453!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00224824663912883!GO:0015002;heme-copper terminal oxidase activity;0.00224824663912883!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00224824663912883!GO:0004129;cytochrome-c oxidase activity;0.00224824663912883!GO:0048468;cell development;0.00228874204917506!GO:0030658;transport vesicle membrane;0.00245925868666321!GO:0016044;membrane organization and biogenesis;0.00254710482497502!GO:0050662;coenzyme binding;0.00257060911150369!GO:0006979;response to oxidative stress;0.00258864168234165!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00276788223520316!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00276788223520316!GO:0005791;rough endoplasmic reticulum;0.00283413236531958!GO:0042802;identical protein binding;0.00294173085762254!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00294422331776929!GO:0005774;vacuolar membrane;0.00304396996397572!GO:0007088;regulation of mitosis;0.00306757785509807!GO:0003684;damaged DNA binding;0.00306757785509807!GO:0008632;apoptotic program;0.00310792335865044!GO:0006414;translational elongation;0.00313650639539669!GO:0007051;spindle organization and biogenesis;0.00321495390264601!GO:0030118;clathrin coat;0.00323520206012137!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00330774722344821!GO:0018196;peptidyl-asparagine modification;0.00372163478530388!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00372163478530388!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00376844076227475!GO:0045792;negative regulation of cell size;0.00377018424467813!GO:0008186;RNA-dependent ATPase activity;0.00380314549755077!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00383141689670983!GO:0031902;late endosome membrane;0.00390157876163378!GO:0043488;regulation of mRNA stability;0.00394173898120353!GO:0043487;regulation of RNA stability;0.00394173898120353!GO:0016859;cis-trans isomerase activity;0.00398483396085068!GO:0008033;tRNA processing;0.00400571915687107!GO:0046483;heterocycle metabolic process;0.00403875902886469!GO:0006626;protein targeting to mitochondrion;0.00409074790994079!GO:0017166;vinculin binding;0.00409101752514874!GO:0006520;amino acid metabolic process;0.00423847783048316!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00440868738855032!GO:0032561;guanyl ribonucleotide binding;0.00442010489709407!GO:0019001;guanyl nucleotide binding;0.00442010489709407!GO:0048487;beta-tubulin binding;0.00442622930215194!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0045019427927869!GO:0005684;U2-dependent spliceosome;0.00458771055090531!GO:0030308;negative regulation of cell growth;0.00467953819162992!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00474596024291891!GO:0046519;sphingoid metabolic process;0.00483179203463836!GO:0008139;nuclear localization sequence binding;0.00489251786543809!GO:0009892;negative regulation of metabolic process;0.00530926228304264!GO:0003746;translation elongation factor activity;0.00545448179619097!GO:0005874;microtubule;0.00555567555021119!GO:0030660;Golgi-associated vesicle membrane;0.00605295151088274!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00611687567248106!GO:0008094;DNA-dependent ATPase activity;0.00614425922207966!GO:0005096;GTPase activator activity;0.00626631221207649!GO:0050790;regulation of catalytic activity;0.00628296992532434!GO:0051028;mRNA transport;0.00648682830905801!GO:0030027;lamellipodium;0.00659549743140619!GO:0044437;vacuolar part;0.00661352825394152!GO:0006778;porphyrin metabolic process;0.00670478541953479!GO:0033013;tetrapyrrole metabolic process;0.00670478541953479!GO:0006695;cholesterol biosynthetic process;0.00677714941016521!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00706859167052205!GO:0008022;protein C-terminus binding;0.00717461380690861!GO:0045941;positive regulation of transcription;0.00720608803124062!GO:0000082;G1/S transition of mitotic cell cycle;0.00726640557384953!GO:0044452;nucleolar part;0.00730240601026436!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00822942773071714!GO:0005765;lysosomal membrane;0.00829222473228718!GO:0045936;negative regulation of phosphate metabolic process;0.00829222473228718!GO:0046467;membrane lipid biosynthetic process;0.00835515910928468!GO:0030134;ER to Golgi transport vesicle;0.00846090092082832!GO:0000059;protein import into nucleus, docking;0.0084677315595567!GO:0001726;ruffle;0.00863322970491564!GO:0030880;RNA polymerase complex;0.00880388580693378!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0088169345747022!GO:0030127;COPII vesicle coat;0.00899435371560505!GO:0012507;ER to Golgi transport vesicle membrane;0.00899435371560505!GO:0004004;ATP-dependent RNA helicase activity;0.00901221088624982!GO:0050789;regulation of biological process;0.00916267637066559!GO:0048037;cofactor binding;0.00934115695705581!GO:0031072;heat shock protein binding;0.00967501400386613!GO:0046426;negative regulation of JAK-STAT cascade;0.00975523108500207!GO:0000775;chromosome, pericentric region;0.00986315486282578!GO:0006595;polyamine metabolic process;0.0104341096984155!GO:0006611;protein export from nucleus;0.010490046734431!GO:0006672;ceramide metabolic process;0.0108473714438701!GO:0019206;nucleoside kinase activity;0.010959307637831!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0111410558766879!GO:0007346;regulation of progression through mitotic cell cycle;0.0111856998529591!GO:0048471;perinuclear region of cytoplasm;0.0118231092646015!GO:0030659;cytoplasmic vesicle membrane;0.0118829995139077!GO:0005862;muscle thin filament tropomyosin;0.0122107553757639!GO:0045893;positive regulation of transcription, DNA-dependent;0.0123297128324118!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0137503587809996!GO:0006740;NADPH regeneration;0.0137581018185107!GO:0006098;pentose-phosphate shunt;0.0137581018185107!GO:0006289;nucleotide-excision repair;0.0137762121316329!GO:0031301;integral to organelle membrane;0.0137762121316329!GO:0016363;nuclear matrix;0.0137839702523997!GO:0046489;phosphoinositide biosynthetic process;0.0138294916804451!GO:0004177;aminopeptidase activity;0.0143414322754806!GO:0004527;exonuclease activity;0.0144224037867102!GO:0051287;NAD binding;0.014453301126667!GO:0000096;sulfur amino acid metabolic process;0.0151678911714115!GO:0007264;small GTPase mediated signal transduction;0.0152335952464946!GO:0042168;heme metabolic process;0.0153242299422782!GO:0006790;sulfur metabolic process;0.0155804105477141!GO:0045926;negative regulation of growth;0.0157084824120923!GO:0000075;cell cycle checkpoint;0.0164176902432062!GO:0051087;chaperone binding;0.0164651439105919!GO:0031529;ruffle organization and biogenesis;0.0164651439105919!GO:0005657;replication fork;0.0165457370209522!GO:0006509;membrane protein ectodomain proteolysis;0.0165457370209522!GO:0033619;membrane protein proteolysis;0.0165457370209522!GO:0032508;DNA duplex unwinding;0.0171010674334834!GO:0032392;DNA geometric change;0.0171010674334834!GO:0005832;chaperonin-containing T-complex;0.0175717321917986!GO:0030125;clathrin vesicle coat;0.0177256319227801!GO:0030665;clathrin coated vesicle membrane;0.0177256319227801!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0178880392189535!GO:0000428;DNA-directed RNA polymerase complex;0.0178880392189535!GO:0035258;steroid hormone receptor binding;0.0178880392189535!GO:0044433;cytoplasmic vesicle part;0.0179286363365674!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0181351318189159!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0184918010896922!GO:0006733;oxidoreduction coenzyme metabolic process;0.0190091816121563!GO:0015631;tubulin binding;0.0194942284785839!GO:0003678;DNA helicase activity;0.0198164764823371!GO:0005869;dynactin complex;0.0199286013582963!GO:0051540;metal cluster binding;0.020477907938627!GO:0051536;iron-sulfur cluster binding;0.020477907938627!GO:0030119;AP-type membrane coat adaptor complex;0.0205822033326245!GO:0006383;transcription from RNA polymerase III promoter;0.0207909926154568!GO:0006891;intra-Golgi vesicle-mediated transport;0.0210736463901998!GO:0003711;transcription elongation regulator activity;0.0212463945675322!GO:0031124;mRNA 3'-end processing;0.0214947402716097!GO:0008538;proteasome activator activity;0.0214947402716097!GO:0042326;negative regulation of phosphorylation;0.0216244909349123!GO:0008243;plasminogen activator activity;0.0216440182579541!GO:0006220;pyrimidine nucleotide metabolic process;0.0217035789151456!GO:0006354;RNA elongation;0.0218873024335706!GO:0031272;regulation of pseudopodium formation;0.0221061733157638!GO:0031269;pseudopodium formation;0.0221061733157638!GO:0031344;regulation of cell projection organization and biogenesis;0.0221061733157638!GO:0031268;pseudopodium organization and biogenesis;0.0221061733157638!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0221061733157638!GO:0031274;positive regulation of pseudopodium formation;0.0221061733157638!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0221061733157638!GO:0016481;negative regulation of transcription;0.0224543524324417!GO:0004674;protein serine/threonine kinase activity;0.0232405930276604!GO:0006779;porphyrin biosynthetic process;0.0232407503547719!GO:0033014;tetrapyrrole biosynthetic process;0.0232407503547719!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0235508548224726!GO:0000049;tRNA binding;0.0237084603709319!GO:0015036;disulfide oxidoreductase activity;0.0239679279078896!GO:0043433;negative regulation of transcription factor activity;0.0250838029617504!GO:0006892;post-Golgi vesicle-mediated transport;0.0257678466168649!GO:0030041;actin filament polymerization;0.0261971508642769!GO:0009262;deoxyribonucleotide metabolic process;0.0267958658449172!GO:0006650;glycerophospholipid metabolic process;0.0269656454495599!GO:0006897;endocytosis;0.0271047101201752!GO:0010324;membrane invagination;0.0271047101201752!GO:0016408;C-acyltransferase activity;0.0271827506130307!GO:0048500;signal recognition particle;0.0272209562858584!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0273550281257189!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0273550281257189!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0273550281257189!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0276865422130739!GO:0016301;kinase activity;0.027711297303344!GO:0031418;L-ascorbic acid binding;0.0285435149796834!GO:0005092;GDP-dissociation inhibitor activity;0.0288726779289651!GO:0009124;nucleoside monophosphate biosynthetic process;0.028958265484476!GO:0009123;nucleoside monophosphate metabolic process;0.028958265484476!GO:0000339;RNA cap binding;0.0291851988114061!GO:0016791;phosphoric monoester hydrolase activity;0.0297799783615027!GO:0044438;microbody part;0.0297934567986701!GO:0044439;peroxisomal part;0.0297934567986701!GO:0003690;double-stranded DNA binding;0.0303823786110533!GO:0043065;positive regulation of apoptosis;0.0303823786110533!GO:0030521;androgen receptor signaling pathway;0.0304361366160079!GO:0030131;clathrin adaptor complex;0.0304593705510638!GO:0006950;response to stress;0.0305113445239367!GO:0007033;vacuole organization and biogenesis;0.0305520758662833!GO:0006268;DNA unwinding during replication;0.0308657764117683!GO:0006635;fatty acid beta-oxidation;0.0310961406225015!GO:0006007;glucose catabolic process;0.0312788827067362!GO:0000030;mannosyltransferase activity;0.0317803624504998!GO:0009966;regulation of signal transduction;0.0318268177043882!GO:0005637;nuclear inner membrane;0.0320518931802449!GO:0043068;positive regulation of programmed cell death;0.03239190469425!GO:0012506;vesicle membrane;0.0324790595363808!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0334324649272472!GO:0006302;double-strand break repair;0.0340687220154531!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0348531600649519!GO:0032981;mitochondrial respiratory chain complex I assembly;0.035134354374347!GO:0010257;NADH dehydrogenase complex assembly;0.035134354374347!GO:0033108;mitochondrial respiratory chain complex assembly;0.035134354374347!GO:0006352;transcription initiation;0.0355180151549691!GO:0019318;hexose metabolic process;0.0356640792157404!GO:0003955;NAD(P)H dehydrogenase (quinone) activity;0.035712504273496!GO:0007242;intracellular signaling cascade;0.0358885730098804!GO:0004518;nuclease activity;0.0359175165031491!GO:0030833;regulation of actin filament polymerization;0.0368595281104636!GO:0003779;actin binding;0.0370367443718506!GO:0006984;ER-nuclear signaling pathway;0.0371625276930378!GO:0007040;lysosome organization and biogenesis;0.0380703598559315!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0381164275008877!GO:0033559;unsaturated fatty acid metabolic process;0.0391242133254201!GO:0006636;unsaturated fatty acid biosynthetic process;0.0391242133254201!GO:0007265;Ras protein signal transduction;0.0391790678518862!GO:0031903;microbody membrane;0.0394637752249836!GO:0005778;peroxisomal membrane;0.0394637752249836!GO:0043130;ubiquitin binding;0.0394894887948449!GO:0032182;small conjugating protein binding;0.0394894887948449!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.040830722821673!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.040830722821673!GO:0048144;fibroblast proliferation;0.0413340675673132!GO:0048145;regulation of fibroblast proliferation;0.0413340675673132!GO:0006739;NADP metabolic process;0.0413756123997313!GO:0005996;monosaccharide metabolic process;0.041591791913852!GO:0009166;nucleotide catabolic process;0.041591791913852!GO:0046822;regulation of nucleocytoplasmic transport;0.041961807837444!GO:0008312;7S RNA binding;0.0421504901140554!GO:0030911;TPR domain binding;0.0422668517020391!GO:0005784;translocon complex;0.0422947851154278!GO:0051537;2 iron, 2 sulfur cluster binding;0.0426149675537429!GO:0032507;maintenance of cellular protein localization;0.0438227253478241!GO:0000910;cytokinesis;0.0438357405056939!GO:0007021;tubulin folding;0.0441562704875322!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.044185341811679!GO:0016311;dephosphorylation;0.0444363405073212!GO:0043022;ribosome binding;0.0446182382561872!GO:0018193;peptidyl-amino acid modification;0.045125623602549!GO:0008180;signalosome;0.0455671805655123!GO:0016584;nucleosome positioning;0.0457399661820606!GO:0046979;TAP2 binding;0.0461606063786598!GO:0046977;TAP binding;0.0461606063786598!GO:0046978;TAP1 binding;0.0461606063786598!GO:0050811;GABA receptor binding;0.0461606063786598!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0473580370999104!GO:0003729;mRNA binding;0.0478048800455946!GO:0048146;positive regulation of fibroblast proliferation;0.04797127325053!GO:0006749;glutathione metabolic process;0.04797127325053!GO:0008637;apoptotic mitochondrial changes;0.0483703526169647!GO:0006497;protein amino acid lipidation;0.0490891824984395!GO:0006401;RNA catabolic process;0.0492177824090448!GO:0006807;nitrogen compound metabolic process;0.0494625734630409!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0496524446964476!GO:0045047;protein targeting to ER;0.0496524446964476!GO:0030508;thiol-disulfide exchange intermediate activity;0.0496524446964476!GO:0045334;clathrin-coated endocytic vesicle;0.0496590148804893!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0498077592992621 | |||
|sample_id=11420 | |sample_id=11420 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=hair follicle | |sample_tissue=hair follicle | ||
|top_motifs=HES1:2.42005990871;GTF2A1,2:1.78654914346;POU2F1..3:1.63711116942;ZNF238:1.5581711626;PBX1:1.46022563213;PAX1,9:1.07160132294;TP53:1.02170092604;GFI1:1.0029707412;TFAP2{A,C}:0.997400426144;GLI1..3:0.989492028346;ESR1:0.984358056655;RXR{A,B,G}:0.922935565593;SRF:0.915914238441;HMX1:0.7984839588;ZNF423:0.791893579847;TLX1..3_NFIC{dimer}:0.766881236131;EBF1:0.742842985416;TEAD1:0.734644050603;TBP:0.716873558445;IKZF1:0.715602590232;NR5A1,2:0.691915213779;ZBTB6:0.68487122033;HAND1,2:0.673815506873;GFI1B:0.66291664761;TFCP2:0.60136991823;TFAP4:0.585656280421;MTF1:0.584436807476;TOPORS:0.56298977157;GZF1:0.557881604574;HOX{A5,B5}:0.552470088763;BACH2:0.524112485914;ZNF148:0.513776995513;NFE2L1:0.46755873109;SOX{8,9,10}:0.449485442386;SPZ1:0.434481880377;TFDP1:0.41619167011;NFE2:0.407074212289;FOS_FOS{B,L1}_JUN{B,D}:0.402744413631;TFAP2B:0.359950552332;LEF1_TCF7_TCF7L1,2:0.358627488429;ZIC1..3:0.358412980144;HIC1:0.351764318212;ESRRA:0.344386861646;STAT5{A,B}:0.341239276632;AR:0.327102942637;EN1,2:0.306908500624;PRRX1,2:0.296653910925;NFE2L2:0.296499126758;NR1H4:0.284570988788;PAX8:0.276452618734;NR3C1:0.275471456412;E2F1..5:0.272897445376;RXRA_VDR{dimer}:0.267878194992;GTF2I:0.220676975542;NFIX:0.218340384718;CRX:0.188391898554;PPARG:0.185464832325;SOX17:0.184976868726;HOXA9_MEIS1:0.17424025705;ONECUT1,2:0.173413297119;NFATC1..3:0.171206475987;POU6F1:0.163779791767;NFY{A,B,C}:0.161504122746;NANOG:0.15283986282;TAL1_TCF{3,4,12}:0.143989373704;HNF1A:0.143386929727;TBX4,5:0.12474262446;MEF2{A,B,C,D}:0.119897297138;CDC5L:0.0812346758709;REST:0.0656714557499;UFEwm:0.0318325950991;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.031637448948;MYB:0.0181406163523;XCPE1{core}:0.00663620036334;YY1:0.00352137861382;ALX4:0.00171528078355;POU3F1..4:0.000431483319529;NANOG{mouse}:-0.0200606171773;FOXL1:-0.0246237141523;RUNX1..3:-0.0482354405079;bHLH_family:-0.0490874495308;MTE{core}:-0.0629971217307;NKX3-2:-0.0667040417008;XBP1:-0.0722023756464;MAFB:-0.0780453052222;PAX5:-0.090149184246;FOSL2:-0.0916988228512;KLF4:-0.105628613848;LHX3,4:-0.11965948286;ETS1,2:-0.124233192445;NKX2-3_NKX2-5:-0.127676644249;MYBL2:-0.150276917926;JUN:-0.152241343745;HLF:-0.161528431619;NFKB1_REL_RELA:-0.164805304686;HOX{A6,A7,B6,B7}:-0.166155190967;MZF1:-0.168150994253;NR6A1:-0.170583666653;AIRE:-0.172636192384;STAT2,4,6:-0.174215394821;SP1:-0.181341954514;NKX2-2,8:-0.194115218504;ATF6:-0.201665180466;HNF4A_NR2F1,2:-0.204064418684;ARID5B:-0.217064373742;DBP:-0.247131058316;SPIB:-0.261339665438;PAX2:-0.273186998715;POU5F1:-0.2766708434;HSF1,2:-0.301086033872;MED-1{core}:-0.318716820115;POU1F1:-0.32068731709;GATA6:-0.320756342835;PATZ1:-0.325493607939;PAX3,7:-0.334743274312;MAZ:-0.343367514695;IRF1,2:-0.390549675354;EGR1..3:-0.405108105275;RFX2..5_RFXANK_RFXAP:-0.430327941334;DMAP1_NCOR{1,2}_SMARC:-0.432669698989;FOX{F1,F2,J1}:-0.439306355593;PRDM1:-0.44086027498;RREB1:-0.456684455167;ZNF143:-0.462702054357;CUX2:-0.474562665339;SPI1:-0.481761931762;FOXM1:-0.485835812267;TGIF1:-0.491678778705;CEBPA,B_DDIT3:-0.497491137247;GCM1,2:-0.497895320836;RFX1:-0.534112748803;SNAI1..3:-0.540134543739;HIF1A:-0.562284951897;FOXA2:-0.595296084943;FOXO1,3,4:-0.599484543555;ELF1,2,4:-0.601272258296;SOX5:-0.602443164378;OCT4_SOX2{dimer}:-0.615605780707;T:-0.616399539399;PAX6:-0.640993325544;NKX2-1,4:-0.652912320752;VSX1,2:-0.663787771192;AHR_ARNT_ARNT2:-0.664163717773;ATF5_CREB3:-0.672048851322;MYFfamily:-0.696768048013;LMO2:-0.698162813458;ELK1,4_GABP{A,B1}:-0.6983033086;NHLH1,2:-0.706157996891;CREB1:-0.706730371356;ALX1:-0.715808264001;NFIL3:-0.717866737772;ZNF384:-0.758656274736;ZFP161:-0.767762904915;SOX2:-0.787295528773;HBP1_HMGB_SSRP1_UBTF:-0.789760706959;NRF1:-0.802867739963;EP300:-0.805691607971;PITX1..3:-0.811067927027;SMAD1..7,9:-0.816093131224;GATA4:-0.830185105916;HOX{A4,D4}:-0.859160178589;IRF7:-0.866243765504;ZEB1:-0.872854026589;ADNP_IRX_SIX_ZHX:-0.936870676384;FOX{I1,J2}:-0.951479102065;RORA:-0.963788820153;BREu{core}:-0.970746565629;NKX3-1:-0.974524046913;MYOD1:-0.980284957666;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.01390080512;NKX6-1,2:-1.01777631111;RBPJ:-1.03170202597;FOXQ1:-1.0653528127;TLX2:-1.09346439886;PDX1:-1.09942653748;FOX{D1,D2}:-1.19139812716;ATF2:-1.23083024342;ATF4:-1.23498929023;FOXP3:-1.25015397484;STAT1,3:-1.5033953596;BPTF:-1.53599061932;HMGA1,2:-1.56167261322;EVI1:-1.61337032772;ZBTB16:-1.6287458623;IKZF2:-1.64868240304;SREBF1,2:-1.66904713576;PAX4:-1.77433245149;FOXN1:-1.83656949927;CDX1,2,4:-1.90683830211;FOXP1:-2.05678304904;FOXD3:-2.12797111309;TEF:-2.37861532231 | |top_motifs=HES1:2.42005990871;GTF2A1,2:1.78654914346;POU2F1..3:1.63711116942;ZNF238:1.5581711626;PBX1:1.46022563213;PAX1,9:1.07160132294;TP53:1.02170092604;GFI1:1.0029707412;TFAP2{A,C}:0.997400426144;GLI1..3:0.989492028346;ESR1:0.984358056655;RXR{A,B,G}:0.922935565593;SRF:0.915914238441;HMX1:0.7984839588;ZNF423:0.791893579847;TLX1..3_NFIC{dimer}:0.766881236131;EBF1:0.742842985416;TEAD1:0.734644050603;TBP:0.716873558445;IKZF1:0.715602590232;NR5A1,2:0.691915213779;ZBTB6:0.68487122033;HAND1,2:0.673815506873;GFI1B:0.66291664761;TFCP2:0.60136991823;TFAP4:0.585656280421;MTF1:0.584436807476;TOPORS:0.56298977157;GZF1:0.557881604574;HOX{A5,B5}:0.552470088763;BACH2:0.524112485914;ZNF148:0.513776995513;NFE2L1:0.46755873109;SOX{8,9,10}:0.449485442386;SPZ1:0.434481880377;TFDP1:0.41619167011;NFE2:0.407074212289;FOS_FOS{B,L1}_JUN{B,D}:0.402744413631;TFAP2B:0.359950552332;LEF1_TCF7_TCF7L1,2:0.358627488429;ZIC1..3:0.358412980144;HIC1:0.351764318212;ESRRA:0.344386861646;STAT5{A,B}:0.341239276632;AR:0.327102942637;EN1,2:0.306908500624;PRRX1,2:0.296653910925;NFE2L2:0.296499126758;NR1H4:0.284570988788;PAX8:0.276452618734;NR3C1:0.275471456412;E2F1..5:0.272897445376;RXRA_VDR{dimer}:0.267878194992;GTF2I:0.220676975542;NFIX:0.218340384718;CRX:0.188391898554;PPARG:0.185464832325;SOX17:0.184976868726;HOXA9_MEIS1:0.17424025705;ONECUT1,2:0.173413297119;NFATC1..3:0.171206475987;POU6F1:0.163779791767;NFY{A,B,C}:0.161504122746;NANOG:0.15283986282;TAL1_TCF{3,4,12}:0.143989373704;HNF1A:0.143386929727;TBX4,5:0.12474262446;MEF2{A,B,C,D}:0.119897297138;CDC5L:0.0812346758709;REST:0.0656714557499;UFEwm:0.0318325950991;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.031637448948;MYB:0.0181406163523;XCPE1{core}:0.00663620036334;YY1:0.00352137861382;ALX4:0.00171528078355;POU3F1..4:0.000431483319529;NANOG{mouse}:-0.0200606171773;FOXL1:-0.0246237141523;RUNX1..3:-0.0482354405079;bHLH_family:-0.0490874495308;MTE{core}:-0.0629971217307;NKX3-2:-0.0667040417008;XBP1:-0.0722023756464;MAFB:-0.0780453052222;PAX5:-0.090149184246;FOSL2:-0.0916988228512;KLF4:-0.105628613848;LHX3,4:-0.11965948286;ETS1,2:-0.124233192445;NKX2-3_NKX2-5:-0.127676644249;MYBL2:-0.150276917926;JUN:-0.152241343745;HLF:-0.161528431619;NFKB1_REL_RELA:-0.164805304686;HOX{A6,A7,B6,B7}:-0.166155190967;MZF1:-0.168150994253;NR6A1:-0.170583666653;AIRE:-0.172636192384;STAT2,4,6:-0.174215394821;SP1:-0.181341954514;NKX2-2,8:-0.194115218504;ATF6:-0.201665180466;HNF4A_NR2F1,2:-0.204064418684;ARID5B:-0.217064373742;DBP:-0.247131058316;SPIB:-0.261339665438;PAX2:-0.273186998715;POU5F1:-0.2766708434;HSF1,2:-0.301086033872;MED-1{core}:-0.318716820115;POU1F1:-0.32068731709;GATA6:-0.320756342835;PATZ1:-0.325493607939;PAX3,7:-0.334743274312;MAZ:-0.343367514695;IRF1,2:-0.390549675354;EGR1..3:-0.405108105275;RFX2..5_RFXANK_RFXAP:-0.430327941334;DMAP1_NCOR{1,2}_SMARC:-0.432669698989;FOX{F1,F2,J1}:-0.439306355593;PRDM1:-0.44086027498;RREB1:-0.456684455167;ZNF143:-0.462702054357;CUX2:-0.474562665339;SPI1:-0.481761931762;FOXM1:-0.485835812267;TGIF1:-0.491678778705;CEBPA,B_DDIT3:-0.497491137247;GCM1,2:-0.497895320836;RFX1:-0.534112748803;SNAI1..3:-0.540134543739;HIF1A:-0.562284951897;FOXA2:-0.595296084943;FOXO1,3,4:-0.599484543555;ELF1,2,4:-0.601272258296;SOX5:-0.602443164378;OCT4_SOX2{dimer}:-0.615605780707;T:-0.616399539399;PAX6:-0.640993325544;NKX2-1,4:-0.652912320752;VSX1,2:-0.663787771192;AHR_ARNT_ARNT2:-0.664163717773;ATF5_CREB3:-0.672048851322;MYFfamily:-0.696768048013;LMO2:-0.698162813458;ELK1,4_GABP{A,B1}:-0.6983033086;NHLH1,2:-0.706157996891;CREB1:-0.706730371356;ALX1:-0.715808264001;NFIL3:-0.717866737772;ZNF384:-0.758656274736;ZFP161:-0.767762904915;SOX2:-0.787295528773;HBP1_HMGB_SSRP1_UBTF:-0.789760706959;NRF1:-0.802867739963;EP300:-0.805691607971;PITX1..3:-0.811067927027;SMAD1..7,9:-0.816093131224;GATA4:-0.830185105916;HOX{A4,D4}:-0.859160178589;IRF7:-0.866243765504;ZEB1:-0.872854026589;ADNP_IRX_SIX_ZHX:-0.936870676384;FOX{I1,J2}:-0.951479102065;RORA:-0.963788820153;BREu{core}:-0.970746565629;NKX3-1:-0.974524046913;MYOD1:-0.980284957666;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.01390080512;NKX6-1,2:-1.01777631111;RBPJ:-1.03170202597;FOXQ1:-1.0653528127;TLX2:-1.09346439886;PDX1:-1.09942653748;FOX{D1,D2}:-1.19139812716;ATF2:-1.23083024342;ATF4:-1.23498929023;FOXP3:-1.25015397484;STAT1,3:-1.5033953596;BPTF:-1.53599061932;HMGA1,2:-1.56167261322;EVI1:-1.61337032772;ZBTB16:-1.6287458623;IKZF2:-1.64868240304;SREBF1,2:-1.66904713576;PAX4:-1.77433245149;FOXN1:-1.83656949927;CDX1,2,4:-1.90683830211;FOXP1:-2.05678304904;FOXD3:-2.12797111309;TEF:-2.37861532231 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11420-118F7;search_select_hide=table117:FF:11420-118F7 | |||
}} | }} | ||
Latest revision as of 17:59, 4 June 2020
| Name: | Hair Follicle Dermal Papilla Cells, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12030 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12030
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12030
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.765 |
| 10 | 10 | 0.857 |
| 100 | 100 | 0.933 |
| 101 | 101 | 0.227 |
| 102 | 102 | 0.827 |
| 103 | 103 | 0.807 |
| 104 | 104 | 0.544 |
| 105 | 105 | 0.105 |
| 106 | 106 | 0.0292 |
| 107 | 107 | 0.0129 |
| 108 | 108 | 0.909 |
| 109 | 109 | 0.0284 |
| 11 | 11 | 0.0803 |
| 110 | 110 | 0.166 |
| 111 | 111 | 0.624 |
| 112 | 112 | 0.671 |
| 113 | 113 | 0.183 |
| 114 | 114 | 0.333 |
| 115 | 115 | 0.856 |
| 116 | 116 | 0.149 |
| 117 | 117 | 0.476 |
| 118 | 118 | 0.898 |
| 119 | 119 | 0.156 |
| 12 | 12 | 0.161 |
| 120 | 120 | 0.264 |
| 121 | 121 | 0.375 |
| 122 | 122 | 0.44 |
| 123 | 123 | 0.411 |
| 124 | 124 | 0.481 |
| 125 | 125 | 0.868 |
| 126 | 126 | 0.438 |
| 127 | 127 | 0.108 |
| 128 | 128 | 0.191 |
| 129 | 129 | 0.706 |
| 13 | 13 | 0.788 |
| 130 | 130 | 0.00998 |
| 131 | 131 | 0.979 |
| 132 | 132 | 0.939 |
| 133 | 133 | 0.785 |
| 134 | 134 | 0.73 |
| 135 | 135 | 0.161 |
| 136 | 136 | 0.509 |
| 137 | 137 | 0.493 |
| 138 | 138 | 0.815 |
| 139 | 139 | 0.522 |
| 14 | 14 | 0.575 |
| 140 | 140 | 0.975 |
| 141 | 141 | 0.663 |
| 142 | 142 | 0.00706 |
| 143 | 143 | 0.0255 |
| 144 | 144 | 0.891 |
| 145 | 145 | 0.179 |
| 146 | 146 | 0.0444 |
| 147 | 147 | 0.244 |
| 148 | 148 | 0.34 |
| 149 | 149 | 0.202 |
| 15 | 15 | 0.567 |
| 150 | 150 | 0.195 |
| 151 | 151 | 0.55 |
| 152 | 152 | 0.0431 |
| 153 | 153 | 0.354 |
| 154 | 154 | 0.64 |
| 155 | 155 | 0.322 |
| 156 | 156 | 0.322 |
| 157 | 157 | 0.998 |
| 158 | 158 | 0.0975 |
| 159 | 159 | 0.506 |
| 16 | 16 | 0.209 |
| 160 | 160 | 0.0563 |
| 161 | 161 | 0.635 |
| 162 | 162 | 0.0209 |
| 163 | 163 | 0.467 |
| 164 | 164 | 0.622 |
| 165 | 165 | 0.222 |
| 166 | 166 | 0.138 |
| 167 | 167 | 0.487 |
| 168 | 168 | 0.774 |
| 169 | 169 | 0.0371 |
| 17 | 17 | 0.147 |
| 18 | 18 | 0.262 |
| 19 | 19 | 0.0554 |
| 2 | 2 | 0.277 |
| 20 | 20 | 0.287 |
| 21 | 21 | 0.738 |
| 22 | 22 | 0.0824 |
| 23 | 23 | 0.201 |
| 24 | 24 | 0.179 |
| 25 | 25 | 0.597 |
| 26 | 26 | 0.00315 |
| 27 | 27 | 0.293 |
| 28 | 28 | 0.263 |
| 29 | 29 | 0.767 |
| 3 | 3 | 0.634 |
| 30 | 30 | 0.168 |
| 31 | 31 | 0.511 |
| 32 | 32 | 0.0124 |
| 33 | 33 | 0.25 |
| 34 | 34 | 0.29 |
| 35 | 35 | 0.854 |
| 36 | 36 | 0.831 |
| 37 | 37 | 0.227 |
| 38 | 38 | 0.643 |
| 39 | 39 | 0.56 |
| 4 | 4 | 0.686 |
| 40 | 40 | 0.0493 |
| 41 | 41 | 0.693 |
| 42 | 42 | 0.752 |
| 43 | 43 | 0.132 |
| 44 | 44 | 0.476 |
| 45 | 45 | 0.237 |
| 46 | 46 | 0.0617 |
| 47 | 47 | 0.501 |
| 48 | 48 | 0.167 |
| 49 | 49 | 0.263 |
| 5 | 5 | 0.863 |
| 50 | 50 | 0.365 |
| 51 | 51 | 0.452 |
| 52 | 52 | 0.205 |
| 53 | 53 | 0.962 |
| 54 | 54 | 0.659 |
| 55 | 55 | 0.672 |
| 56 | 56 | 0.511 |
| 57 | 57 | 0.339 |
| 58 | 58 | 0.959 |
| 59 | 59 | 0.0246 |
| 6 | 6 | 0.988 |
| 60 | 60 | 0.332 |
| 61 | 61 | 0.425 |
| 62 | 62 | 0.59 |
| 63 | 63 | 0.217 |
| 64 | 64 | 0.313 |
| 65 | 65 | 0.167 |
| 66 | 66 | 0.279 |
| 67 | 67 | 0.753 |
| 68 | 68 | 0.403 |
| 69 | 69 | 0.106 |
| 7 | 7 | 0.851 |
| 70 | 70 | 0.876 |
| 71 | 71 | 0.112 |
| 72 | 72 | 0.955 |
| 73 | 73 | 0.0377 |
| 74 | 74 | 0.743 |
| 75 | 75 | 0.863 |
| 76 | 76 | 0.55 |
| 77 | 77 | 0.0116 |
| 78 | 78 | 0.652 |
| 79 | 79 | 0.442 |
| 8 | 8 | 0.0833 |
| 80 | 80 | 0.799 |
| 81 | 81 | 0.675 |
| 82 | 82 | 0.496 |
| 83 | 83 | 0.448 |
| 84 | 84 | 0.203 |
| 85 | 85 | 0.119 |
| 86 | 86 | 0.842 |
| 87 | 87 | 0.0324 |
| 88 | 88 | 0.191 |
| 89 | 89 | 0.515 |
| 9 | 9 | 0.0963 |
| 90 | 90 | 0.132 |
| 91 | 91 | 0.0487 |
| 92 | 92 | 0.887 |
| 93 | 93 | 0.784 |
| 94 | 94 | 0.387 |
| 95 | 95 | 0.122 |
| 96 | 96 | 0.348 |
| 97 | 97 | 0.412 |
| 98 | 98 | 0.131 |
| 99 | 99 | 0.0109 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12030
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000071 human hair follicle dermal papilla cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002559 (hair follicle cell)
0000346 (hair follicle dermal papilla cell)
1000428 (stem cell of epidermis)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001003 (skin epidermis)
0002097 (skin of body)
0002199 (integument)
0002073 (hair follicle)
0000483 (epithelium)
0002384 (connective tissue)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003102 (surface structure)
0007376 (outer epithelium)
0010371 (ecto-epithelium)
0010317 (germ layer / neural crest derived structure)
0000412 (dermal papilla)
0002067 (dermis)
0001992 (papillary layer of dermis)
0002416 (integumental system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000072 (human hair follicle cell sample)
0000001 (sample)
0000071 (human hair follicle dermal papilla cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000221 (ectodermal cell)
