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FFCP PHASE1:Mm9::chr7:4796396..4796471,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=232813
|EntrezGene=232813
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8C3Q5
|UniProt=Q8C3Q5
|association_with_transcript=-98bp_to_ENSMUST00000066041,ENSMUST00000132587,ENSMUST00000172377,NM_172737,uc009eyu.2_5end
|association_with_transcript=-98bp_to_ENSMUST00000066041,ENSMUST00000132587,ENSMUST00000172377,NM_172737,uc009eyu.2_5end
|cluster_id=chr7:4796396..4796471,-
|description=CAGE_peak_1_at_Shisa7_5end
|description=CAGE_peak_1_at_Shisa7_5end
|id=chr7:4796396..4796471,-
|id=chr7:4796396..4796471,-
|ontology_enrichment_celltype=CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0000540!3.00e-12!33;CL:0000047!3.00e-12!33;CL:0000031!3.00e-12!33;CL:0000404!3.00e-12!33;CL:0000393!1.21e-08!39;CL:0000211!1.21e-08!39;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0002319!1.30e-08!43
|ontology_enrichment_celltype=CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0000540!3.00e-12!33;CL:0000047!3.00e-12!33;CL:0000031!3.00e-12!33;CL:0000404!3.00e-12!33;CL:0000393!1.21e-08!39;CL:0000211!1.21e-08!39;CL:0000221!1.26e-08!44;CL:0000133!1.26e-08!44;CL:0002319!1.30e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.25e-20,23;CL:0000337,2.25e-20,23;CL:0000540,4.59e-15,33;CL:0000047,4.59e-15,33;CL:0000031,4.59e-15,33;CL:0000404,4.59e-15,33;CL:0000393,2.11e-11,39;CL:0000211,2.11e-11,39;CL:0002319,3.91e-11,43;CL:0000221,1.11e-10,44;CL:0000133,1.11e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.32e-25!71;UBERON:0003075!2.32e-25!71;UBERON:0007284!2.32e-25!71;UBERON:0004121!5.83e-25!102;UBERON:0000924!5.83e-25!102;UBERON:0006601!5.83e-25!102;UBERON:0001017!7.69e-25!73;UBERON:0005743!7.69e-25!73;UBERON:0000073!1.33e-24!75;UBERON:0001016!1.33e-24!75;UBERON:0001049!2.61e-22!52;UBERON:0005068!2.61e-22!52;UBERON:0006241!2.61e-22!52;UBERON:0007135!2.61e-22!52;UBERON:0000955!4.40e-21!50;UBERON:0006238!4.40e-21!50;UBERON:0002616!2.75e-20!49;UBERON:0002020!1.84e-19!34;UBERON:0000033!2.22e-19!63;UBERON:0003056!5.97e-19!49;UBERON:0003080!1.74e-18!40;UBERON:0002780!8.65e-18!39;UBERON:0001890!8.65e-18!39;UBERON:0006240!8.65e-18!39;UBERON:0002791!3.26e-16!29;UBERON:0003528!3.26e-16!29;UBERON:0001893!3.26e-16!29;UBERON:0000956!4.11e-11!21;UBERON:0001869!4.11e-11!21;UBERON:0000203!4.11e-11!21;UBERON:0007811!7.32e-10!86;UBERON:0002619!4.27e-09!17;UBERON:0000153!6.79e-09!94;UBERON:0002021!9.42e-09!10;UBERON:0000411!9.42e-09!10;UBERON:0001950!9.42e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.34e-34,73;UBERON:0000073,1.01e-33,54;UBERON:0001016,1.73e-32,75;UBERON:0001049,9.31e-32,52;UBERON:0005068,9.31e-32,52;UBERON:0006241,9.31e-32,52;UBERON:0007135,9.31e-32,52;UBERON:0002346,4.84e-29,64;UBERON:0003075,4.84e-29,64;UBERON:0007284,4.84e-29,64;UBERON:0002020,6.48e-29,34;UBERON:0000955,3.52e-27,47;UBERON:0006238,3.52e-27,47;UBERON:0002616,4.93e-26,46;UBERON:0004121,1.48e-25,95;UBERON:0000924,1.48e-25,95;UBERON:0006601,1.48e-25,95;UBERON:0003080,3.08e-25,40;UBERON:0002780,3.19e-24,39;UBERON:0001890,3.19e-24,39;UBERON:0006240,3.19e-24,39;UBERON:0003528,4.29e-24,29;UBERON:0002791,4.29e-24,29;UBERON:0001893,4.29e-24,29;UBERON:0010371,2.62e-23,73;UBERON:0003056,4.24e-23,49;UBERON:0010314,3.92e-18,92;UBERON:0000956,1.60e-16,21;UBERON:0001869,1.60e-16,21;UBERON:0000203,1.60e-16,21;UBERON:0002619,1.52e-13,17;UBERON:0002021,3.81e-12,10;UBERON:0000411,3.81e-12,10;UBERON:0001950,3.81e-12,10;UBERON:0002420,1.02e-08,8;UBERON:0007245,1.02e-08,8;UBERON:0010009,1.02e-08,8;UBERON:0010011,1.02e-08,8;UBERON:0000454,1.02e-08,8;UBERON:0003076,6.29e-07,12;UBERON:0003057,6.29e-07,12
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1274053472779,13.7537654610729,14.5781222806421,0,0,0,0,0,1.19840044207362,1.15265491596466,2.59224030771194,3.51015439662396,1.89292465216244,11.4260393761521,10.1599528837742,4.65465037016825,5.17565543498476,6.43453150627015,8.8092704799511,12.1302971180928,9.21639199537461,13.0567424852892,11.3444678066988,13.5437476344758,7.53794097303729,7.31591393041184,14.515833538797,15.0260578591571,11.5321061447273,14.911955666024,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0,1.33597925158342,1.04091196059682,1.82679286987285,1.15307748628029,0.904335843315735,0.940709657085638,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0,0,2.04946557908083,1.04723353406728,0.255457055208591,0,0,0,18.574039286198,31.5675415944852,22.240820323977,30.4192560336484,23.2701066170601,15.1685272528479,22.2270530402828,0.305518091550949,0,0,0.420883711772948,0,0.229902104433473,0.540186389416048,0.60281927134286,2.10913147369116,1.5373646434182,1.78033276663485,1.29351685369508,0,0.378212160335639,0.175951124163949,0.876782929710299,1.11218899690239,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,22.9216043934899,8.43817821510132,0,0,0,1.39342003116263,0.515469845288373,0.403367049246685,0.667134131534611,0.760902504450237,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.420814919341911,0.379419222745544,0.442830443938806,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.339490171550376,0.469380496577004,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0,0,6.58257418949947,6.68106613575558,0,0,0.631016438832513,0.390438744296638,2.58508077279359,0,0,0.566153061577665,0.404810701674894,1.16902343164525,1.18586333383957,33.4174169078679,0,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0,0,0.316036757935816,0,0,2.04263763452273,0,0.258717367565509,0.214337035031592,0.886701168211368,1.42695054081656,1.97458824722545,2.43571959291679,0,0,0,0.32977250588296,0.161464426695906,0.422190474497091,0.119372344003136,0.328281799490123,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.432021363287205,0.209088296014469,0.436725127492355,0.269728692769641,1.07449492442937,0.26175594198403,0.259229946583586,0,0,0.897099276263873,0.496375471371293,0.972255941720238,0.258319646955462,0.675824501963113,1.40828686374905,0.651021924219751,0.209718688851422,0.241584120826006,0.576060012515731,0,0.405450430580328,0,0.25984164595559,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,25.413832917768,20.2543104063158,26.9260891316516,21.3097946106173,19.8673930733486,37.0143009720953,26.3258775090404,35.1250538514892,25.8291173120997,24.8524949640874,0.415149390336707,2.79317411380722,2.56100408631201,1.45864030240976,1.04806581313991,2.38996560985018,1.77797382241292,1.64828045791115,1.92551525755089,1.51618327058278,3.29523089857312,0.943131706930381,1.87283014939765,1.92075457214608,2.01024141344646,0.952587382566147,2.54945517078682,1.15745532278223,1.23625770240992,0.883193520806384,0.685738504770831,2.30718548007139,1.90748951957857,2.0348498328526,1.88218760830661,2.03075058940024,1.82927972872773,0.789209134313529,2.30866993537965,3.36685362994643,2.13543032623513,1.37906275325789,1.22769312950907,0.929621047115796,1.15743966588685,4.74640098082097,2.57324769289949,1.50409737833809,2.29545998482612,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1274053472779,13.7537654610729,14.5781222806421,0,0,0,0,0,1.19840044207362,1.15265491596466,2.59224030771194,3.51015439662396,1.89292465216244,11.4260393761521,10.1599528837742,4.65465037016825,5.17565543498476,6.43453150627015,8.8092704799511,12.1302971180928,9.21639199537461,13.0567424852892,11.3444678066988,13.5437476344758,7.53794097303729,7.31591393041184,14.515833538797,15.0260578591571,11.5321061447273,14.911955666024,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0,1.33597925158342,1.04091196059682,1.82679286987285,1.15307748628029,0.904335843315735,0.940709657085638,0.251333182659351,0.247194967734374,0.144599356919912,0,0,0,0,0,2.04946557908083,1.04723353406728,0.255457055208591,0,0,0,18.574039286198,31.5675415944852,22.240820323977,30.4192560336484,23.2701066170601,15.1685272528479,22.2270530402828,0.305518091550949,0,0,0.420883711772948,0,0.229902104433473,0.540186389416048,0.60281927134286,2.10913147369116,1.5373646434182,1.78033276663485,1.29351685369508,0,0.378212160335639,0.175951124163949,0.876782929710299,1.11218899690239,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,22.9216043934899,8.43817821510132,0,0,0,1.39342003116263,0.515469845288373,0.403367049246685,0.667134131534611,0.760902504450237,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.420814919341911,0.379419222745544,0.442830443938806,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.339490171550376,0.469380496577004,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.655453258862952,0.345369963731791,0.144649058581512,0,0,0,0,6.58257418949947,6.68106613575558,0,0,0.631016438832513,0.390438744296638,2.58508077279359,0,0,0.566153061577665,0.404810701674894,1.16902343164525,1.18586333383957,33.4174169078679,0,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0,0,0.316036757935816,0,0,2.04263763452273,0,0.258717367565509,0.214337035031592,0.886701168211368,1.42695054081656,1.97458824722545,2.43571959291679,0,0,0,0.32977250588296,0.161464426695906,0.422190474497091,0.119372344003136,0.328281799490123,0,7.04616147639937,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.432021363287205,0.209088296014469,0.436725127492355,0.269728692769641,1.07449492442937,0.26175594198403,0.259229946583586,0,0,0.897099276263873,0.496375471371293,0.972255941720238,0.258319646955462,0.675824501963113,1.40828686374905,0.651021924219751,0.209718688851422,0.241584120826006,0.576060012515731,0,0.405450430580328,0,0.25984164595559,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,25.413832917768,20.2543104063158,26.9260891316516,21.3097946106173,19.8673930733486,37.0143009720953,26.3258775090404,35.1250538514892,25.8291173120997,24.8524949640874,0.415149390336707,2.79317411380722,2.56100408631201,1.45864030240976,1.04806581313991,2.38996560985018,1.77797382241292,1.64828045791115,1.92551525755089,1.51618327058278,3.29523089857312,0.943131706930381,1.87283014939765,1.92075457214608,2.01024141344646,0.952587382566147,2.54945517078682,1.15745532278223,1.23625770240992,0.883193520806384,0.685738504770831,2.30718548007139,1.90748951957857,2.0348498328526,1.88218760830661,2.03075058940024,1.82927972872773,0.789209134313529,2.30866993537965,3.36685362994643,2.13543032623513,1.37906275325789,1.22769312950907,0.929621047115796,1.15743966588685,4.74640098082097,2.57324769289949,1.50409737833809,2.29545998482612,0,0.231867835620421
|short_description=p1@Shisa7
|short_description=p1@Shisa7
}}
}}

Latest revision as of 18:00, 26 September 2015

Short description:p1@Shisa7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shisa7_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -98bp_to_ENSMUST00000066041, ENSMUST00000132587, ENSMUST00000172377, NM_172737, uc009eyu.2_5end
EntrezGene:Shisa7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shisa7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.18
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.57
corpus striatum, adult.CNhs10487.19-21D831.57
corpus striatum, neonate N00.CNhs11226.630-43F122.24
cortex, adult.CNhs10473.12-14D530.42
cortex, neonate N30.CNhs11107.1392-42F223.27
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B222.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G18.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.58
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I933.42
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.41
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.25
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.25e-2023
neuroblast (sensu Vertebrata)2.25e-2023
neuron4.59e-1533
neuronal stem cell4.59e-1533
neuroblast4.59e-1533
electrically signaling cell4.59e-1533
electrically responsive cell2.11e-1139
electrically active cell2.11e-1139
neural cell3.91e-1143
ectodermal cell1.11e-1044
neurectodermal cell1.11e-1044

Uber anatomy
Ontology termp-valuen
central nervous system6.34e-3473
regional part of nervous system1.01e-3354
nervous system1.73e-3275
neural tube9.31e-3252
neural rod9.31e-3252
future spinal cord9.31e-3252
neural keel9.31e-3252
neurectoderm4.84e-2964
neural plate4.84e-2964
presumptive neural plate4.84e-2964
gray matter6.48e-2934
brain3.52e-2747
future brain3.52e-2747
regional part of brain4.93e-2646
ectoderm-derived structure1.48e-2595
ectoderm1.48e-2595
presumptive ectoderm1.48e-2595
anterior neural tube3.08e-2540
regional part of forebrain3.19e-2439
forebrain3.19e-2439
future forebrain3.19e-2439
brain grey matter4.29e-2429
regional part of telencephalon4.29e-2429
telencephalon4.29e-2429
ecto-epithelium2.62e-2373
pre-chordal neural plate4.24e-2349
structure with developmental contribution from neural crest3.92e-1892
cerebral cortex1.60e-1621
cerebral hemisphere1.60e-1621
pallium1.60e-1621
regional part of cerebral cortex1.52e-1317
occipital lobe3.81e-1210
visual cortex3.81e-1210
neocortex3.81e-1210
basal ganglion1.02e-088
nuclear complex of neuraxis1.02e-088
aggregate regional part of brain1.02e-088
collection of basal ganglia1.02e-088
cerebral subcortex1.02e-088
posterior neural tube6.29e-0712
chordal neural plate6.29e-0712
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